| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yieF [H]
Identifier: 86747558
GI number: 86747558
Start: 476112
End: 476693
Strand: Direct
Name: yieF [H]
Synonym: RPB_0432
Alternate gene names: 86747558
Gene position: 476112-476693 (Clockwise)
Preceding gene: 86747557
Following gene: 86747559
Centisome position: 8.93
GC content: 66.15
Gene sequence:
>582_bases ATGTCTGCGGTGAAGATCCTCGTCATTCCGGGCTCCCTGCGCACCGGTTCGCACAACGCGCGGCTCGCCGCCGCTGCGGC GCATGAATTCGCCCGCGCCGACGTCGACGTCACCCGGCTGTCGCTCGCCGATTTTCCACTGCCGATCTACGACGGCGACT TCGAGGCCAAATCCGGTGTGCCGATCCACGCGATCAATCTGAAGCGGATGATCGGCAGCCACCACGGCGTGCTGATCGTC AGCCCGGAATACAATTCGGCGCCGCCGGCGCTGCTGAAGAATGCGATCGACTGGGTGTCGCGCGTTCAGGACCCGCACGA GACGCAGGGCCAGGTGTTTCGCGAGCGCGCCTTCGCGCTGGCGTCGGCCTCCGAAGGCAAGCTCGGCGGCGCGCGCTGCC TTGCAGCTCTGCGACTGATCCTGTCCGGCTGCCGCGCCCCGGTGATTCCCAATCAGCTCGCGCTGTCGTTCGCGCATCAG GCCTATGACGAGGCCGACCACCTGAAGCTGCCGGCCGACGTCGCCGCGATGCAGGCGATGGTCCGGCAGTTGATCGATTT CGCCCAACAGATGATGAGGTAA
Upstream 100 bases:
>100_bases GCACAATCCGAGAAAATCCGGTGTTTCTTCGCCGCCGAACTCCGCTAAACAGAGCGCGGCCGTGGTCGCATGCAGTCCTC TGCGGCAGGAGATCGGCGTC
Downstream 100 bases:
>100_bases TTGGTCATGGCGCAAGCCGACCCCGCTGATCGCGACCGGCTGATCGTCGCATTGGATGTCCCGAGCGTCGACGCCGCCAA GGCGATGATCGACAAGCTCG
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSAVKILVIPGSLRTGSHNARLAAAAAHEFARADVDVTRLSLADFPLPIYDGDFEAKSGVPIHAINLKRMIGSHHGVLIV SPEYNSAPPALLKNAIDWVSRVQDPHETQGQVFRERAFALASASEGKLGGARCLAALRLILSGCRAPVIPNQLALSFAHQ AYDEADHLKLPADVAAMQAMVRQLIDFAQQMMR
Sequences:
>Translated_193_residues MSAVKILVIPGSLRTGSHNARLAAAAAHEFARADVDVTRLSLADFPLPIYDGDFEAKSGVPIHAINLKRMIGSHHGVLIV SPEYNSAPPALLKNAIDWVSRVQDPHETQGQVFRERAFALASASEGKLGGARCLAALRLILSGCRAPVIPNQLALSFAHQ AYDEADHLKLPADVAAMQAMVRQLIDFAQQMMR >Mature_192_residues SAVKILVIPGSLRTGSHNARLAAAAAHEFARADVDVTRLSLADFPLPIYDGDFEAKSGVPIHAINLKRMIGSHHGVLIVS PEYNSAPPALLKNAIDWVSRVQDPHETQGQVFRERAFALASASEGKLGGARCLAALRLILSGCRAPVIPNQLALSFAHQA YDEADHLKLPADVAAMQAMVRQLIDFAQQMMR
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=139, Percent_Identity=39.568345323741, Blast_Score=87, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20823; Mature: 20692
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVKILVIPGSLRTGSHNARLAAAAAHEFARADVDVTRLSLADFPLPIYDGDFEAKSGV CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCCCCC PIHAINLKRMIGSHHGVLIVSPEYNSAPPALLKNAIDWVSRVQDPHETQGQVFRERAFAL CEEEEHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASASEGKLGGARCLAALRLILSGCRAPVIPNQLALSFAHQAYDEADHLKLPADVAAMQAM HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH VRQLIDFAQQMMR HHHHHHHHHHHHC >Mature Secondary Structure SAVKILVIPGSLRTGSHNARLAAAAAHEFARADVDVTRLSLADFPLPIYDGDFEAKSGV CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCCCCC PIHAINLKRMIGSHHGVLIVSPEYNSAPPALLKNAIDWVSRVQDPHETQGQVFRERAFAL CEEEEHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASASEGKLGGARCLAALRLILSGCRAPVIPNQLALSFAHQAYDEADHLKLPADVAAMQAM HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH VRQLIDFAQQMMR HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]