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The map label for this gene is 86747548

Identifier: 86747548

GI number: 86747548

Start: 464874

End: 466073

Strand: Direct

Name: 86747548

Synonym: RPB_0422

Alternate gene names: NA

Gene position: 464874-466073 (Clockwise)

Preceding gene: 86747537

Following gene: 86747552

Centisome position: 8.72

GC content: 69.17

Gene sequence:

>1200_bases
ATGGCGGAACTGCGCGATCGAAATACCACGTCTCTGCGAACCAGCCGCCGCACGGCGGTCGGATTGATCCTCGGCGCGCC
GTTGCTCGGCGCCTGCTCGGGGATGCAGCAGACGCTCTCCAGTCAGTTCGGCCAGCAGCCGACCGCGCCGGAGGCCGCGC
AGCAATCGCAATCCGTCGGCAACGGTCGGGTCAAGGTCGGTCTCGTGCTGCCGCTGTCTGCGGCCGGAAATGCCGGCGTC
GCCGCGCAGTCGATGAAGAATGCCGCCGAGATGGCGCTCGCCGAGTTCAACAATCCCGACATCCAGTTGCTGGTGAAAGA
CGATGCCGGCAATCCGCAGGGCGCGCAGGCCGCGACCCAGCAGGCGCTCGACGAAGGCGCCGAGATCATGCTCGGTCCGC
TGTTCGCGCAATCGGTGCCGGCTGCCGCCCAGCTGACGCGCGCCCGCGGCATCTCGATGATCGCGTTCTCGACGGATTCG
AGCGTCGCCGGCCGCGGCGTCTATCTGTTGAGCTTCCTGCCGGAGTCCGACGTCAACCGGATCATCGGCTACGCGTCGAG
CGTCGGCAAACGTTCCTATGCGGCACTGCTGCCGGACAACGCCTATGGCGGCGTCGTCGAGGCCGCCTTCAAGCAGGTGG
TCGGGACCAAGGGCGGCCGCATCGCCGCGTTCGAGAAATACGGCGCCGACCGAGCCGGCCCGGCGCGGACCATCGCGCAG
GCGCTGTCCGGCGCCGATTCGCTGCTGCTCGCCGATGACGGTGATGCGCTGGCAAGCGTCAGCGAGGCGCTGACCGCGGC
GGGCGCCGATCTGCGCCGCGTGCAGTTGCTCGGCACCGGGCTGTGGGACAATCCGCGCGTGTTCGCAACGCCGGCGTTGC
AGGGTGGACTCTACGCCGCGCCCGATCCGTCCGGCTTTCGCAGTTTCTCTGGCCGCTACCGCGCCAAATTCGGCCAGGAA
CCCGTCCGCACCGCGACGCTCGCTTACGATGCAGTGGCGCTGGTGGCGGCCTTGTCGAAGACGCAGGGTGCCAAGCGGTT
CTCGGCCGAGGTGTTGACCAATCCGTCGGGCTTCGCCGGCATCGACGGCCTGTTTCGCTTCCGCGCCGACGGCAGCAACG
AGCGGGGCCTCGCGGTGATGCGCGTTGCGACCGGCGGCGCCCAGGCGGTGGCTGGATCGCCGAAGAGCTTCGGGGCGTAG

Upstream 100 bases:

>100_bases
TAATCATTCGTCGACATTATGATGGGATGTCCGGCGATGGTGGATCAGACCTGAACGACCGGAAATCGGACTGGCGTTGC
CGGTCCCTGCAAGAGAGATC

Downstream 100 bases:

>100_bases
TCCCTGCCGTCATAGTCGATCCGGGGCGCCGCACAGCGGCGAAGCCGGAATTCTGGCGTGATGACTACGCCGCCAGATCC
GCCACGACGGCATCCAGCAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAELRDRNTTSLRTSRRTAVGLILGAPLLGACSGMQQTLSSQFGQQPTAPEAAQQSQSVGNGRVKVGLVLPLSAAGNAGV
AAQSMKNAAEMALAEFNNPDIQLLVKDDAGNPQGAQAATQQALDEGAEIMLGPLFAQSVPAAAQLTRARGISMIAFSTDS
SVAGRGVYLLSFLPESDVNRIIGYASSVGKRSYAALLPDNAYGGVVEAAFKQVVGTKGGRIAAFEKYGADRAGPARTIAQ
ALSGADSLLLADDGDALASVSEALTAAGADLRRVQLLGTGLWDNPRVFATPALQGGLYAAPDPSGFRSFSGRYRAKFGQE
PVRTATLAYDAVALVAALSKTQGAKRFSAEVLTNPSGFAGIDGLFRFRADGSNERGLAVMRVATGGAQAVAGSPKSFGA

Sequences:

>Translated_399_residues
MAELRDRNTTSLRTSRRTAVGLILGAPLLGACSGMQQTLSSQFGQQPTAPEAAQQSQSVGNGRVKVGLVLPLSAAGNAGV
AAQSMKNAAEMALAEFNNPDIQLLVKDDAGNPQGAQAATQQALDEGAEIMLGPLFAQSVPAAAQLTRARGISMIAFSTDS
SVAGRGVYLLSFLPESDVNRIIGYASSVGKRSYAALLPDNAYGGVVEAAFKQVVGTKGGRIAAFEKYGADRAGPARTIAQ
ALSGADSLLLADDGDALASVSEALTAAGADLRRVQLLGTGLWDNPRVFATPALQGGLYAAPDPSGFRSFSGRYRAKFGQE
PVRTATLAYDAVALVAALSKTQGAKRFSAEVLTNPSGFAGIDGLFRFRADGSNERGLAVMRVATGGAQAVAGSPKSFGA
>Mature_398_residues
AELRDRNTTSLRTSRRTAVGLILGAPLLGACSGMQQTLSSQFGQQPTAPEAAQQSQSVGNGRVKVGLVLPLSAAGNAGVA
AQSMKNAAEMALAEFNNPDIQLLVKDDAGNPQGAQAATQQALDEGAEIMLGPLFAQSVPAAAQLTRARGISMIAFSTDSS
VAGRGVYLLSFLPESDVNRIIGYASSVGKRSYAALLPDNAYGGVVEAAFKQVVGTKGGRIAAFEKYGADRAGPARTIAQA
LSGADSLLLADDGDALASVSEALTAAGADLRRVQLLGTGLWDNPRVFATPALQGGLYAAPDPSGFRSFSGRYRAKFGQEP
VRTATLAYDAVALVAALSKTQGAKRFSAEVLTNPSGFAGIDGLFRFRADGSNERGLAVMRVATGGAQAVAGSPKSFGA

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40901; Mature: 40769

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELRDRNTTSLRTSRRTAVGLILGAPLLGACSGMQQTLSSQFGQQPTAPEAAQQSQSVG
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
NGRVKVGLVLPLSAAGNAGVAAQSMKNAAEMALAEFNNPDIQLLVKDDAGNPQGAQAATQ
CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
QALDEGAEIMLGPLFAQSVPAAAQLTRARGISMIAFSTDSSVAGRGVYLLSFLPESDVNR
HHHHCCCCEEECHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHH
IIGYASSVGKRSYAALLPDNAYGGVVEAAFKQVVGTKGGRIAAFEKYGADRAGPARTIAQ
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCHHHHHHH
ALSGADSLLLADDGDALASVSEALTAAGADLRRVQLLGTGLWDNPRVFATPALQGGLYAA
HHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEC
PDPSGFRSFSGRYRAKFGQEPVRTATLAYDAVALVAALSKTQGAKRFSAEVLTNPSGFAG
CCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
IDGLFRFRADGSNERGLAVMRVATGGAQAVAGSPKSFGA
CCHHEEEECCCCCCCCEEEEEEECCCCHHCCCCCCCCCC
>Mature Secondary Structure 
AELRDRNTTSLRTSRRTAVGLILGAPLLGACSGMQQTLSSQFGQQPTAPEAAQQSQSVG
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
NGRVKVGLVLPLSAAGNAGVAAQSMKNAAEMALAEFNNPDIQLLVKDDAGNPQGAQAATQ
CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
QALDEGAEIMLGPLFAQSVPAAAQLTRARGISMIAFSTDSSVAGRGVYLLSFLPESDVNR
HHHHCCCCEEECHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHH
IIGYASSVGKRSYAALLPDNAYGGVVEAAFKQVVGTKGGRIAAFEKYGADRAGPARTIAQ
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCHHHHHHH
ALSGADSLLLADDGDALASVSEALTAAGADLRRVQLLGTGLWDNPRVFATPALQGGLYAA
HHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEC
PDPSGFRSFSGRYRAKFGQEPVRTATLAYDAVALVAALSKTQGAKRFSAEVLTNPSGFAG
CCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
IDGLFRFRADGSNERGLAVMRVATGGAQAVAGSPKSFGA
CCHHEEEECCCCCCCCEEEEEEECCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA