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The map label for this gene is yhdE [C]

Identifier: 86747522

GI number: 86747522

Start: 441635

End: 442243

Strand: Direct

Name: yhdE [C]

Synonym: RPB_0396

Alternate gene names: 86747522

Gene position: 441635-442243 (Clockwise)

Preceding gene: 86747521

Following gene: 86747523

Centisome position: 8.28

GC content: 68.31

Gene sequence:

>609_bases
ATGACGCTGTGGCTCGGCCCCGGGCCGCTGGTGCTGGCCTCGCAGAGCCGCGCCCGGCAGGCGCTGTTGAGCAATGCCGG
GATTCCGTTCGACGCGATCCCGGCCGACATCGACGAGCGCGGCATCGCCAAAGCTTCCGGCCTGTCGGCGCCCGGCGAGA
TCGCCGCGCTGCTGGCGCAGGAGAAGGCCGCGTTCGTCTCGAATCATCACCCCGGCCGCCTGGTGCTCGGCGCCGACCAG
ACGCTGGCGCTGGGTGCGCGCGGCTTCAACAAGCCGGCCGACCGCAATGAGGCGGCAAAGCAATTGCGCGAACTCGCCGG
CCGCCGCCACGAGCTCCATGCCGCGATCGCCCTGGTGCGCAACGGCGTCACGCTGTTCGCCGATGTGTCGATCGCCCGGA
TGACGATGCGGCCGTTGAACGATGAGGAGATCGCCGCCTATCTCGACCTGGCCGGCGACAAGGCGACATCGAGCGTCGGC
GGCTATCAGGTCGAGGGTCTCGGCGTGCATCTGTTCGACGGCATCCACGGCGACCATTTCACCATTCTGGGCCTGCCGCT
GTTGCCCTTGCTCGGCTTTCTGCGTAGCCAGAAACTGCTGGCGTTCTGA

Upstream 100 bases:

>100_bases
ACGGCTGGTCGCTGCTCGACGTCACCCGTCGGTCGATCGAGGAGACCGCGGCCGCGATCATGAAGCTGCTCGCCGATCGG
CAACGCCAGAGGATGTCCGA

Downstream 100 bases:

>100_bases
CGAGAGCCGGCCAAAAAGCGGAGGGGCGGAATGCTGGTACTCGGGCTCACCGGGTCGATCGGAATGGGGAAATCCACCAC
CGCGAAGCTGTTCGGGGAGG

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTLWLGPGPLVLASQSRARQALLSNAGIPFDAIPADIDERGIAKASGLSAPGEIAALLAQEKAAFVSNHHPGRLVLGADQ
TLALGARGFNKPADRNEAAKQLRELAGRRHELHAAIALVRNGVTLFADVSIARMTMRPLNDEEIAAYLDLAGDKATSSVG
GYQVEGLGVHLFDGIHGDHFTILGLPLLPLLGFLRSQKLLAF

Sequences:

>Translated_202_residues
MTLWLGPGPLVLASQSRARQALLSNAGIPFDAIPADIDERGIAKASGLSAPGEIAALLAQEKAAFVSNHHPGRLVLGADQ
TLALGARGFNKPADRNEAAKQLRELAGRRHELHAAIALVRNGVTLFADVSIARMTMRPLNDEEIAAYLDLAGDKATSSVG
GYQVEGLGVHLFDGIHGDHFTILGLPLLPLLGFLRSQKLLAF
>Mature_201_residues
TLWLGPGPLVLASQSRARQALLSNAGIPFDAIPADIDERGIAKASGLSAPGEIAALLAQEKAAFVSNHHPGRLVLGADQT
LALGARGFNKPADRNEAAKQLRELAGRRHELHAAIALVRNGVTLFADVSIARMTMRPLNDEEIAAYLDLAGDKATSSVGG
YQVEGLGVHLFDGIHGDHFTILGLPLLPLLGFLRSQKLLAF

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=30.0518134715026, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI291045183, Length=187, Percent_Identity=31.0160427807487, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=34.9462365591398, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=31.9371727748691, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y396_RHOP2 (Q2J353)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_484018.1
- ProteinModelPortal:   Q2J353
- SMR:   Q2J353
- STRING:   Q2J353
- GeneID:   3908834
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_0396
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   CAGSFKA
- ProtClustDB:   CLSK924018
- BioCyc:   RPAL316058:RPB_0396-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21366; Mature: 21235

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: ACT_SITE 39-39

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWLGPGPLVLASQSRARQALLSNAGIPFDAIPADIDERGIAKASGLSAPGEIAALLAQ
CEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHH
EKAAFVSNHHPGRLVLGADQTLALGARGFNKPADRNEAAKQLRELAGRRHELHAAIALVR
HHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
NGVTLFADVSIARMTMRPLNDEEIAAYLDLAGDKATSSVGGYQVEGLGVHLFDGIHGDHF
CCEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCE
TILGLPLLPLLGFLRSQKLLAF
EEEHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
TLWLGPGPLVLASQSRARQALLSNAGIPFDAIPADIDERGIAKASGLSAPGEIAALLAQ
EEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHH
EKAAFVSNHHPGRLVLGADQTLALGARGFNKPADRNEAAKQLRELAGRRHELHAAIALVR
HHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
NGVTLFADVSIARMTMRPLNDEEIAAYLDLAGDKATSSVGGYQVEGLGVHLFDGIHGDHF
CCEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCE
TILGLPLLPLLGFLRSQKLLAF
EEEHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA