| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is tesB [H]
Identifier: 86747496
GI number: 86747496
Start: 411182
End: 412057
Strand: Direct
Name: tesB [H]
Synonym: RPB_0370
Alternate gene names: 86747496
Gene position: 411182-412057 (Clockwise)
Preceding gene: 86747489
Following gene: 86747497
Centisome position: 7.71
GC content: 66.21
Gene sequence:
>876_bases GTGTCCAAAAGCCTGATCGACCTGATCTCGATCCTCGATCTCGAACCGCTCGAGGTGAACCTGTTCCGCGGCACCAGCCC GCAGACCAGCTGGCAGCGGGTGTTCGGCGGCCAGGTGATCGGCCAGGCGATGGTCGCCGGCTGCCGCACCGTCGAAAACC GGCTGCCGCATTCGCTGCACTGCTATTTCATCCTGCCGGGCGATCCGGCGGTGCCGATCATCTACGAGGTCGAGCGGCTG CGCGACGGCAAGAGCTACACCACCCGCCGCGTCACCGCGATCCAGCACGGCCAGGCGATCTTCTCGCTGATGATGTCGTT CCACGACGACGAGGAGACCGAGTTCGACCATCAGGACAAGATGCCCGACGTGCCGCCGCCGGAGGCGCTGTCGGCCGAAG AGATCGTCAAGCAGCCGTTCTTCAAGGAGATGCCGGACTTCATCAAGCGCTACTACGAGAGCGACCGGCCGATCGAGTTG CGCCCGGTCGAGCTGTCGCGCTATTTCGGCCAGAAGATCGAAGACGGCCGCATCCACGTCTGGATTCGCACCGCCGCCAA GCTGCCGGACGACCCGGCGCTGCATATGTGCGCGCTGGCCTATGCGTCGGACTTCTCGCTACTCGACGCGGTGATGGCAC GCTACGGCCGCACGCTGTTCGACAAGCGGATGATGCCGGCCAGCCTCGACCACGCGATGTGGTTCCACCGCCCGTTTCGC GCCGACGAATGGCTGCTTTACGTTCAGGACTCCCCGTCCGCCCAGAGCGGCCGCGGCCTGACCCGCGGCATGATCTACAA GGCCGACGGCACCCTGGTGGCCTCGGTCGCCCAGGAGGGCTCGGTGCGGCAGCGACGAGACCTGCCGCGGACGTAG
Upstream 100 bases:
>100_bases GCTGGGAAATCACGCGCCACTGGCCGACTATTTCGACGCGTTGCCTTCACGCGAACCGGTGCCCACTTCGCTTGAAAACG CCTTAAAGGAGCGCCTGTCG
Downstream 100 bases:
>100_bases CTTCGATCGGCAGCTCCCTCGCCGACGTCAATCCGCTTATTTTCTGCGCGCATTGCCGCTAAACCCGGCATATACATGAC GAAACGCCGCGTCGCGCGGT
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSKSLIDLISILDLEPLEVNLFRGTSPQTSWQRVFGGQVIGQAMVAGCRTVENRLPHSLHCYFILPGDPAVPIIYEVERL RDGKSYTTRRVTAIQHGQAIFSLMMSFHDDEETEFDHQDKMPDVPPPEALSAEEIVKQPFFKEMPDFIKRYYESDRPIEL RPVELSRYFGQKIEDGRIHVWIRTAAKLPDDPALHMCALAYASDFSLLDAVMARYGRTLFDKRMMPASLDHAMWFHRPFR ADEWLLYVQDSPSAQSGRGLTRGMIYKADGTLVASVAQEGSVRQRRDLPRT
Sequences:
>Translated_291_residues MSKSLIDLISILDLEPLEVNLFRGTSPQTSWQRVFGGQVIGQAMVAGCRTVENRLPHSLHCYFILPGDPAVPIIYEVERL RDGKSYTTRRVTAIQHGQAIFSLMMSFHDDEETEFDHQDKMPDVPPPEALSAEEIVKQPFFKEMPDFIKRYYESDRPIEL RPVELSRYFGQKIEDGRIHVWIRTAAKLPDDPALHMCALAYASDFSLLDAVMARYGRTLFDKRMMPASLDHAMWFHRPFR ADEWLLYVQDSPSAQSGRGLTRGMIYKADGTLVASVAQEGSVRQRRDLPRT >Mature_290_residues SKSLIDLISILDLEPLEVNLFRGTSPQTSWQRVFGGQVIGQAMVAGCRTVENRLPHSLHCYFILPGDPAVPIIYEVERLR DGKSYTTRRVTAIQHGQAIFSLMMSFHDDEETEFDHQDKMPDVPPPEALSAEEIVKQPFFKEMPDFIKRYYESDRPIELR PVELSRYFGQKIEDGRIHVWIRTAAKLPDDPALHMCALAYASDFSLLDAVMARYGRTLFDKRMMPASLDHAMWFHRPFRA DEWLLYVQDSPSAQSGRGLTRGMIYKADGTLVASVAQEGSVRQRRDLPRT
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=285, Percent_Identity=39.2982456140351, Blast_Score=211, Evalue=7e-55, Organism=Escherichia coli, GI1786657, Length=287, Percent_Identity=44.5993031358885, Blast_Score=241, Evalue=4e-65, Organism=Caenorhabditis elegans, GI71988741, Length=305, Percent_Identity=37.3770491803279, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17558508, Length=319, Percent_Identity=36.0501567398119, Blast_Score=180, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17531889, Length=276, Percent_Identity=36.5942028985507, Blast_Score=166, Evalue=9e-42, Organism=Caenorhabditis elegans, GI115532456, Length=277, Percent_Identity=36.4620938628159, Blast_Score=166, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17531885, Length=276, Percent_Identity=36.5942028985507, Blast_Score=166, Evalue=1e-41, Organism=Caenorhabditis elegans, GI71982224, Length=297, Percent_Identity=32.3232323232323, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI212645202, Length=266, Percent_Identity=32.7067669172932, Blast_Score=121, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6322480, Length=333, Percent_Identity=26.4264264264264, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 33322; Mature: 33190
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSLIDLISILDLEPLEVNLFRGTSPQTSWQRVFGGQVIGQAMVAGCRTVENRLPHSLH CCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE CYFILPGDPAVPIIYEVERLRDGKSYTTRRVTAIQHGQAIFSLMMSFHDDEETEFDHQDK EEEEECCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC MPDVPPPEALSAEEIVKQPFFKEMPDFIKRYYESDRPIELRPVELSRYFGQKIEDGRIHV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCEEEE WIRTAAKLPDDPALHMCALAYASDFSLLDAVMARYGRTLFDKRMMPASLDHAMWFHRPFR EEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC ADEWLLYVQDSPSAQSGRGLTRGMIYKADGTLVASVAQEGSVRQRRDLPRT CCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHHCCCHHHHHCCCCC >Mature Secondary Structure SKSLIDLISILDLEPLEVNLFRGTSPQTSWQRVFGGQVIGQAMVAGCRTVENRLPHSLH CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE CYFILPGDPAVPIIYEVERLRDGKSYTTRRVTAIQHGQAIFSLMMSFHDDEETEFDHQDK EEEEECCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC MPDVPPPEALSAEEIVKQPFFKEMPDFIKRYYESDRPIELRPVELSRYFGQKIEDGRIHV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCEEEE WIRTAAKLPDDPALHMCALAYASDFSLLDAVMARYGRTLFDKRMMPASLDHAMWFHRPFR EEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC ADEWLLYVQDSPSAQSGRGLTRGMIYKADGTLVASVAQEGSVRQRRDLPRT CCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]