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The map label for this gene is ftsY [H]

Identifier: 86747488

GI number: 86747488

Start: 404397

End: 405344

Strand: Direct

Name: ftsY [H]

Synonym: RPB_0362

Alternate gene names: 86747488

Gene position: 404397-405344 (Clockwise)

Preceding gene: 86747486

Following gene: 86747489

Centisome position: 7.58

GC content: 67.41

Gene sequence:

>948_bases
ATGAGTGACACTCCGGAAAATGCGAAACCGAGCTGGTGGCGGCGGCTGTCCAGCGGACTGAAGCGCACGTCGAGCTCGAT
CGGCACGGCGCTGTCCGAATTCATATCCAAGCGCAAGCTCGACCGGGCGATGCTCGACGAGATCGAGGACGTGCTGCTGC
GCGCCGACCTCGGCACCGAGGTGGCGACGCGGATTTCGGACGCGGTCGGCGAGGGCCGCTACGACAAGATGATCTCGGCC
GGCGACGTCAAGGAGATCGTCGCCGCCGAGGTCGAGAAGGTGCTGGCGCCGGTAGCCAAGCCCCTGGTGATCGACCGCGC
CAAGAAGCCGTTCGTGGTGCTGGTGGTCGGCGTCAACGGCTCCGGCAAGACCACCACGATCGGCAAGCTGTCGGCGCGCT
ATGCGGCCGAAGGCCACAAGGTGATGATGGCGGCGGGCGACACCTTCCGGGCCGCGGCGATCGAGCAGCTCAAGGTCTGG
GGCGAGCGCACCGGCACGCCGGTGATCGCCGGCGCGCAGGGCTCGGATTCGGCCAGTCTGGCGTTCAACGCGCTGACCAC
GGCCAAAGAACAAGCCCGCGACGTGCTGCTGATCGACACCGCGGGCCGGCTGCAGAACCGCACCGAGCTGATGAACGAAC
TCGGCAAGGTGGTGCGGGTGATCAAGAAGGTCGACGACACCGCGCCGCATGCGGTGCTGCTGGTGCTCGACGCCACCGTC
GGCCAGAACGCGCTGTCGCAGGTCGAGGCCTTCACCAAGACCGCCGGCGTGACGGGCTTGGTGATGACCAAGCTCGACGG
CACCGCGCGCGGCGGGATTCTCGTCGCGATCGCCGAGAAGCACAAATTGCCGGTGCATTTCATCGGCGTCGGCGAAGGCG
TCGAGGATCTGGCGCCGTTCACCGCGCGCGATTTCGCCCAGGCGATCGCCGGCACGGAGACCACATGA

Upstream 100 bases:

>100_bases
CAGCACCCGCGACTGAATGTCCTCCGCCGACAGTTCCGGCACGTCGAATTGATCGGTGTGGCTTTCGTTCATGACGCGAA
ACGGCTAACACAGCGCCCTG

Downstream 100 bases:

>100_bases
CCAACGAGACCCTGCCGAACAACCAGCCGCATCCGCTGTTCAAGCTCGCCACCGAGCTTGGGCCATTGCTGGTGTTCTTC
GTCGTCAATGCGAAGTGGCA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSDTPENAKPSWWRRLSSGLKRTSSSIGTALSEFISKRKLDRAMLDEIEDVLLRADLGTEVATRISDAVGEGRYDKMISA
GDVKEIVAAEVEKVLAPVAKPLVIDRAKKPFVVLVVGVNGSGKTTTIGKLSARYAAEGHKVMMAAGDTFRAAAIEQLKVW
GERTGTPVIAGAQGSDSASLAFNALTTAKEQARDVLLIDTAGRLQNRTELMNELGKVVRVIKKVDDTAPHAVLLVLDATV
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAQAIAGTETT

Sequences:

>Translated_315_residues
MSDTPENAKPSWWRRLSSGLKRTSSSIGTALSEFISKRKLDRAMLDEIEDVLLRADLGTEVATRISDAVGEGRYDKMISA
GDVKEIVAAEVEKVLAPVAKPLVIDRAKKPFVVLVVGVNGSGKTTTIGKLSARYAAEGHKVMMAAGDTFRAAAIEQLKVW
GERTGTPVIAGAQGSDSASLAFNALTTAKEQARDVLLIDTAGRLQNRTELMNELGKVVRVIKKVDDTAPHAVLLVLDATV
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAQAIAGTETT
>Mature_314_residues
SDTPENAKPSWWRRLSSGLKRTSSSIGTALSEFISKRKLDRAMLDEIEDVLLRADLGTEVATRISDAVGEGRYDKMISAG
DVKEIVAAEVEKVLAPVAKPLVIDRAKKPFVVLVVGVNGSGKTTTIGKLSARYAAEGHKVMMAAGDTFRAAAIEQLKVWG
ERTGTPVIAGAQGSDSASLAFNALTTAKEQARDVLLIDTAGRLQNRTELMNELGKVVRVIKKVDDTAPHAVLLVLDATVG
QNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAQAIAGTETT

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=302, Percent_Identity=29.4701986754967, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI226371618, Length=236, Percent_Identity=32.2033898305085, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI295424842, Length=307, Percent_Identity=28.6644951140065, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI23308697, Length=296, Percent_Identity=29.0540540540541, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=30.1470588235294, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1789874, Length=312, Percent_Identity=46.7948717948718, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1788963, Length=281, Percent_Identity=35.9430604982206, Blast_Score=132, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=28.4210526315789, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=283, Percent_Identity=31.095406360424, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=306, Percent_Identity=29.4117647058824, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=308, Percent_Identity=25.974025974026, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=29.4964028776978, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24641198, Length=290, Percent_Identity=27.9310344827586, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33360; Mature: 33229

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPENAKPSWWRRLSSGLKRTSSSIGTALSEFISKRKLDRAMLDEIEDVLLRADLGTE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VATRISDAVGEGRYDKMISAGDVKEIVAAEVEKVLAPVAKPLVIDRAKKPFVVLVVGVNG
HHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
SGKTTTIGKLSARYAAEGHKVMMAAGDTFRAAAIEQLKVWGERTGTPVIAGAQGSDSASL
CCCEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHH
AFNALTTAKEQARDVLLIDTAGRLQNRTELMNELGKVVRVIKKVDDTAPHAVLLVLDATV
HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHH
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCH
TARDFAQAIAGTETT
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDTPENAKPSWWRRLSSGLKRTSSSIGTALSEFISKRKLDRAMLDEIEDVLLRADLGTE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VATRISDAVGEGRYDKMISAGDVKEIVAAEVEKVLAPVAKPLVIDRAKKPFVVLVVGVNG
HHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
SGKTTTIGKLSARYAAEGHKVMMAAGDTFRAAAIEQLKVWGERTGTPVIAGAQGSDSASL
CCCEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHH
AFNALTTAKEQARDVLLIDTAGRLQNRTELMNELGKVVRVIKKVDDTAPHAVLLVLDATV
HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHH
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCH
TARDFAQAIAGTETT
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]