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The map label for this gene is erfK [H]

Identifier: 86747446

GI number: 86747446

Start: 364866

End: 365393

Strand: Direct

Name: erfK [H]

Synonym: RPB_0320

Alternate gene names: 86747446

Gene position: 364866-365393 (Clockwise)

Preceding gene: 86747445

Following gene: 86747448

Centisome position: 6.84

GC content: 67.42

Gene sequence:

>528_bases
ATGTCTGTTGGATTTCGGTCGGCGAAGATGGCGGTTGCAGGCGCGGTGCTGGCCGCGACGTCGATGCTGGCGGCGCCCGG
CGCCGAGGCAGGGCCGAGCCTGGTCGCCTTCCGCGGCGACTACTCGCCCGGGACCATCGTGGTCAAAACGCACGAGCGCA
AATTGTATCTGGTGGTCGAGCCGGGCCAGGCGGTGCGCTATCCGGTCGGCGTCGGCAAGCCCGGCAAGAGCTGGCAAGGC
GTCACCAAGATCGACGGCAAGTATCGCAACCCGGCCTGGGCGCCGCCCGCGGACGTCAAGCGCGACAATCCGGCCATCCC
GGATGTGATCGCCGGCGGCACGCCGGAGAATCCGATGGGCGTCGCGGCGATGACATTGGCCGGCGGCGAATACGCCATCC
ACGGCACCAACCGGCCGAACTCGATCGGCGGCTTCGTCTCCTATGGCTGCATCCGGATGCTCAACGACGACATCACCGAT
TTGTATCAGCGCGTCCCGGTCGGCACCCAGGTGGTCGTGACGCGTTGA

Upstream 100 bases:

>100_bases
CACCGCACGGTACCGGTCGGTTAACGCGCGTCGTTACAATGGCATCGCGTAGCGGCGGCGGGACGGACGACGAGACCTGC
ACGGGACACTGGAGAGACGG

Downstream 100 bases:

>100_bases
GCGCGGGCTCGCGCTCGCGAGCCGGCTGTTTCGCTAAGCGCCCCACTCTCTCTGCGTCATCCTGAGGCGCACGCCCGGCG
CGCTTTTGCGCGGCGGGCGT

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSVGFRSAKMAVAGAVLAATSMLAAPGAEAGPSLVAFRGDYSPGTIVVKTHERKLYLVVEPGQAVRYPVGVGKPGKSWQG
VTKIDGKYRNPAWAPPADVKRDNPAIPDVIAGGTPENPMGVAAMTLAGGEYAIHGTNRPNSIGGFVSYGCIRMLNDDITD
LYQRVPVGTQVVVTR

Sequences:

>Translated_175_residues
MSVGFRSAKMAVAGAVLAATSMLAAPGAEAGPSLVAFRGDYSPGTIVVKTHERKLYLVVEPGQAVRYPVGVGKPGKSWQG
VTKIDGKYRNPAWAPPADVKRDNPAIPDVIAGGTPENPMGVAAMTLAGGEYAIHGTNRPNSIGGFVSYGCIRMLNDDITD
LYQRVPVGTQVVVTR
>Mature_174_residues
SVGFRSAKMAVAGAVLAATSMLAAPGAEAGPSLVAFRGDYSPGTIVVKTHERKLYLVVEPGQAVRYPVGVGKPGKSWQGV
TKIDGKYRNPAWAPPADVKRDNPAIPDVIAGGTPENPMGVAAMTLAGGEYAIHGTNRPNSIGGFVSYGCIRMLNDDITDL
YQRVPVGTQVVVTR

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=137, Percent_Identity=39.4160583941606, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787040, Length=135, Percent_Identity=39.2592592592593, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=39.4160583941606, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1787356, Length=137, Percent_Identity=39.4160583941606, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18294; Mature: 18163

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGFRSAKMAVAGAVLAATSMLAAPGAEAGPSLVAFRGDYSPGTIVVKTHERKLYLVVE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEC
PGQAVRYPVGVGKPGKSWQGVTKIDGKYRNPAWAPPADVKRDNPAIPDVIAGGTPENPMG
CCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
VAAMTLAGGEYAIHGTNRPNSIGGFVSYGCIRMLNDDITDLYQRVPVGTQVVVTR
EEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
SVGFRSAKMAVAGAVLAATSMLAAPGAEAGPSLVAFRGDYSPGTIVVKTHERKLYLVVE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEC
PGQAVRYPVGVGKPGKSWQGVTKIDGKYRNPAWAPPADVKRDNPAIPDVIAGGTPENPMG
CCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
VAAMTLAGGEYAIHGTNRPNSIGGFVSYGCIRMLNDDITDLYQRVPVGTQVVVTR
EEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]