| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is acsA [H]
Identifier: 86747445
GI number: 86747445
Start: 362549
End: 364507
Strand: Direct
Name: acsA [H]
Synonym: RPB_0319
Alternate gene names: 86747445
Gene position: 362549-364507 (Clockwise)
Preceding gene: 86747444
Following gene: 86747446
Centisome position: 6.8
GC content: 65.34
Gene sequence:
>1959_bases ATGTCCGAGAAGATCTACGACGTGCCCTCGGAATGGGCGAGCCGCGCCTTCGTCGACGACGCGAAGTACCGCGAGATGTA CGCCCGCTCGGTCAATGACCCGAACGGCTTCTGGGCCGACCAAGCCAAACGCATCGACTGGATCAAGCCGCCGCACAAGA TCGAGAACTGCTCGTTCGCGCCCGGCAACGTCTCGATCAAATGGTTCGAGGACGGCGTCCTCAACGTCGCGCACAACTGC ATCGACCGCCATCTCGCCACCCGCGGCGACCAGGTCGCGATCATCTGGGAGGGCGACGACCCGTCGCAGTCGCGCCACAT CACCTATCGCGAGCTGCACGACGAGGTCTGCAAATTCGCCAACATCCTGCGCAGCCGCAATGTCGAGAAGGGCGACCGCG TCACCATCTATCTGCCGATGATCCCCGAAGCGGCCTTCGCGATGCTGGCCTGCGCGCGGATCGGCGCGATCCATTCGGTG GTGTTCGCCGGCTTCTCGCCGGACTCGCTGGCCGGCCGCATCAACGACTGCCAGTCCAAGATCGTGATCACCGCCGACGA AGGCCTGCGCGGCGGCAAGAAGGTGCCGCTGAAGGCCAATGTCGACGCCGCGCTGAAGAAGTGCGACGGCGTCGACTGGG TGATGGTGGTGAAGCGCACCAGCGCCGCCATCGAGATGGATGACGTTCGCGACTTCTGGTACCACGAGGCCGCCGAGATG GTGACCACCGAGTGCCCGATCGAGCACATGCACGCGGAAGATCCGCTGTTCATCCTGTACACGTCGGGATCGACCGGCCA GCCCAAGGGCGTGCTGCACACCTCGGGCGGCTATCTGGTGTTCGCCTCGATGACGCACCAATACGTGTTCGATTATCACG ACGGCGACATCTACTGGTGCACCGCCGACGTCGGCTGGGTCACCGGCCACAGCTACATCCTCTATGGGCCGCTCGCCAAT GGCGCCACCACGCTGATGTTCGAAGGCGTGCCGAACTACCCGACCAATTCGCGGTTCTGGGACGTCATCGACAAGCACAA GGTCAACATCTTCTACACCGCGCCGACCGCGATCCGGGCGCTGATGCAGGCCGGCGACGAGCCGGTGAAAAAGACCTCGC GCAAATCGCTGCGGCTGCTCGGCTCGGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAGTGGTATCACCGCGTCGTCGGC GACGACCGCTGCCCGATCGTCGATACCTGGTGGCAGACCGAAACCGGCGGCATCCTGATCACGCCGCTGCCCGGCGCGAC CAAGCTGAAGCCCGGCTCGGCGACGCGGCCGTTCTTCGGCGTGGTGCCGGAGATCCTCGATCCGGAAGGCGTGGTGCTGG AAGGCGAATGCACCGGCAATCTGTGCCTGGCGCGGTCCTGGCCGGGGCAGATGCGCACCGTCTATGGCGACCACGAACGG TTCGAGCAGACCTATTTCTCGGCCTATAAGGGCAAATACTTCACCGGCGACGGCTGCCGCCGCGACGCCGACGGCTATTA CTGGATCACCGGCCGGGTCGACGACGTCATCAACGTCTCCGGCCACCGCATGGGCACCGCCGAGGTCGAGTCCTCGCTGG TGGCGCATCCCAAGGTGTCGGAGGCCGCCGTGGTCGGCTATCCGCACGACATCAAGGGTCAGGGCATCTACGCCTATGTG ACCCTGATGGCCGGGATCGAGCCGTCGGAGGAGCTGCGCAAGGAGCTGGTGGCCTGGGTCCGCAAGGACATCGGCCCGAT CGCCTCGCCGGACCTGATCCAGTTCGCGCCCGGCCTGCCGAAGACCCGCTCCGGCAAGATCATGCGCCGCATCCTGCGCA AGATCGCCGAGGACGAGCCCTCGACGCTCGGCGATACCTCGACGCTGGCCGATCCCGCGGTGGTCGACGATCTCGTCGAG CATCGCCAGAACAAGCACCACAAGGACAAGGTCGGCTGA
Upstream 100 bases:
>100_bases CGGAAGGTGCTGACGGATGAGCCCGCCGGGTTTGAAGCGATTTGCGGTCCGTGCACCGACGGCGGGTGCGGCAAGGCCGC GTATTCGGGTGGAGGAAAGA
Downstream 100 bases:
>100_bases GCCGCAAGCCGGCTCGCAGGGCGTCACGATCGGCCCCGTCCCTCGCGCGAGGGGCGGGGCTTTTTCGTGCCGTGGCCGGA TGATCTGACGCCCGTCATCC
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MSEKIYDVPSEWASRAFVDDAKYREMYARSVNDPNGFWADQAKRIDWIKPPHKIENCSFAPGNVSIKWFEDGVLNVAHNC IDRHLATRGDQVAIIWEGDDPSQSRHITYRELHDEVCKFANILRSRNVEKGDRVTIYLPMIPEAAFAMLACARIGAIHSV VFAGFSPDSLAGRINDCQSKIVITADEGLRGGKKVPLKANVDAALKKCDGVDWVMVVKRTSAAIEMDDVRDFWYHEAAEM VTTECPIEHMHAEDPLFILYTSGSTGQPKGVLHTSGGYLVFASMTHQYVFDYHDGDIYWCTADVGWVTGHSYILYGPLAN GATTLMFEGVPNYPTNSRFWDVIDKHKVNIFYTAPTAIRALMQAGDEPVKKTSRKSLRLLGSVGEPINPEAWEWYHRVVG DDRCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVVPEILDPEGVVLEGECTGNLCLARSWPGQMRTVYGDHER FEQTYFSAYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVSEAAVVGYPHDIKGQGIYAYV TLMAGIEPSEELRKELVAWVRKDIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAEDEPSTLGDTSTLADPAVVDDLVE HRQNKHHKDKVG
Sequences:
>Translated_652_residues MSEKIYDVPSEWASRAFVDDAKYREMYARSVNDPNGFWADQAKRIDWIKPPHKIENCSFAPGNVSIKWFEDGVLNVAHNC IDRHLATRGDQVAIIWEGDDPSQSRHITYRELHDEVCKFANILRSRNVEKGDRVTIYLPMIPEAAFAMLACARIGAIHSV VFAGFSPDSLAGRINDCQSKIVITADEGLRGGKKVPLKANVDAALKKCDGVDWVMVVKRTSAAIEMDDVRDFWYHEAAEM VTTECPIEHMHAEDPLFILYTSGSTGQPKGVLHTSGGYLVFASMTHQYVFDYHDGDIYWCTADVGWVTGHSYILYGPLAN GATTLMFEGVPNYPTNSRFWDVIDKHKVNIFYTAPTAIRALMQAGDEPVKKTSRKSLRLLGSVGEPINPEAWEWYHRVVG DDRCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVVPEILDPEGVVLEGECTGNLCLARSWPGQMRTVYGDHER FEQTYFSAYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVSEAAVVGYPHDIKGQGIYAYV TLMAGIEPSEELRKELVAWVRKDIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAEDEPSTLGDTSTLADPAVVDDLVE HRQNKHHKDKVG >Mature_651_residues SEKIYDVPSEWASRAFVDDAKYREMYARSVNDPNGFWADQAKRIDWIKPPHKIENCSFAPGNVSIKWFEDGVLNVAHNCI DRHLATRGDQVAIIWEGDDPSQSRHITYRELHDEVCKFANILRSRNVEKGDRVTIYLPMIPEAAFAMLACARIGAIHSVV FAGFSPDSLAGRINDCQSKIVITADEGLRGGKKVPLKANVDAALKKCDGVDWVMVVKRTSAAIEMDDVRDFWYHEAAEMV TTECPIEHMHAEDPLFILYTSGSTGQPKGVLHTSGGYLVFASMTHQYVFDYHDGDIYWCTADVGWVTGHSYILYGPLANG ATTLMFEGVPNYPTNSRFWDVIDKHKVNIFYTAPTAIRALMQAGDEPVKKTSRKSLRLLGSVGEPINPEAWEWYHRVVGD DRCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVVPEILDPEGVVLEGECTGNLCLARSWPGQMRTVYGDHERF EQTYFSAYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVSEAAVVGYPHDIKGQGIYAYVT LMAGIEPSEELRKELVAWVRKDIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAEDEPSTLGDTSTLADPAVVDDLVEH RQNKHHKDKVG
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=666, Percent_Identity=55.1051051051051, Blast_Score=724, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=679, Percent_Identity=54.0500736377025, Blast_Score=721, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=631, Percent_Identity=51.3470681458003, Blast_Score=672, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=633, Percent_Identity=37.914691943128, Blast_Score=411, Evalue=1e-114, Organism=Homo sapiens, GI42544132, Length=540, Percent_Identity=29.8148148148148, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI38505220, Length=516, Percent_Identity=31.3953488372093, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI31982927, Length=631, Percent_Identity=25.3565768621236, Blast_Score=193, Evalue=5e-49, Organism=Homo sapiens, GI122937307, Length=510, Percent_Identity=28.4313725490196, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI115511026, Length=544, Percent_Identity=28.3088235294118, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI58082049, Length=564, Percent_Identity=26.9503546099291, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI157311624, Length=563, Percent_Identity=26.4653641207815, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI157311622, Length=563, Percent_Identity=26.4653641207815, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI42544134, Length=357, Percent_Identity=26.0504201680672, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI195947378, Length=438, Percent_Identity=25.7990867579909, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI187761345, Length=388, Percent_Identity=27.8350515463918, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI187761343, Length=388, Percent_Identity=27.8350515463918, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI156151445, Length=558, Percent_Identity=24.0143369175627, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1790505, Length=640, Percent_Identity=65.9375, Blast_Score=911, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=634, Percent_Identity=38.1703470031546, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI221142682, Length=527, Percent_Identity=24.2884250474383, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI145693145, Length=509, Percent_Identity=24.1650294695481, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1788107, Length=556, Percent_Identity=24.2805755395683, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71983001, Length=640, Percent_Identity=50.78125, Blast_Score=650, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=640, Percent_Identity=50.78125, Blast_Score=649, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=659, Percent_Identity=21.5477996965099, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI32563687, Length=524, Percent_Identity=25, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17538037, Length=562, Percent_Identity=24.3772241992883, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17557194, Length=562, Percent_Identity=24.5551601423488, Blast_Score=109, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17558820, Length=518, Percent_Identity=22.7799227799228, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71985884, Length=607, Percent_Identity=22.0757825370675, Blast_Score=85, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323182, Length=654, Percent_Identity=50.3058103975535, Blast_Score=639, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=634, Percent_Identity=49.0536277602524, Blast_Score=608, Evalue=1e-175, Organism=Saccharomyces cerevisiae, GI6319699, Length=542, Percent_Identity=24.169741697417, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24667955, Length=662, Percent_Identity=54.2296072507553, Blast_Score=712, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=58.5409252669039, Blast_Score=659, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=58.8461538461538, Blast_Score=612, Evalue=1e-175, Organism=Drosophila melanogaster, GI21355225, Length=650, Percent_Identity=36, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI18859661, Length=535, Percent_Identity=25.7943925233645, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI21355181, Length=518, Percent_Identity=22.972972972973, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24581924, Length=528, Percent_Identity=22.3484848484848, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24656500, Length=382, Percent_Identity=24.0837696335079, Blast_Score=82, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 72729; Mature: 72598
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00018 EF_HAND_1 ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKIYDVPSEWASRAFVDDAKYREMYARSVNDPNGFWADQAKRIDWIKPPHKIENCSFA CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC PGNVSIKWFEDGVLNVAHNCIDRHLATRGDQVAIIWEGDDPSQSRHITYRELHDEVCKFA CCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH NILRSRNVEKGDRVTIYLPMIPEAAFAMLACARIGAIHSVVFAGFSPDSLAGRINDCQSK HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCE IVITADEGLRGGKKVPLKANVDAALKKCDGVDWVMVVKRTSAAIEMDDVRDFWYHEAAEM EEEEECCCCCCCCCCCEECCHHHHHHHCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHH VTTECPIEHMHAEDPLFILYTSGSTGQPKGVLHTSGGYLVFASMTHQYVFDYHDGDIYWC HHHCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEEEECCEEEEE TADVGWVTGHSYILYGPLANGATTLMFEGVPNYPTNSRFWDVIDKHKVNIFYTAPTAIRA ECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHH LMQAGDEPVKKTSRKSLRLLGSVGEPINPEAWEWYHRVVGDDRCPIVDTWWQTETGGILI HHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEE TPLPGATKLKPGSATRPFFGVVPEILDPEGVVLEGECTGNLCLARSWPGQMRTVYGDHER ECCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEECCCCCCEEEEECCCCCHHEECCCHHH FEQTYFSAYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVS HHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCC EAAVVGYPHDIKGQGIYAYVTLMAGIEPSEELRKELVAWVRKDIGPIASPDLIQFAPGLP CEEEECCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC KTRSGKIMRRILRKIAEDEPSTLGDTSTLADPAVVDDLVEHRQNKHHKDKVG CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEKIYDVPSEWASRAFVDDAKYREMYARSVNDPNGFWADQAKRIDWIKPPHKIENCSFA CCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC PGNVSIKWFEDGVLNVAHNCIDRHLATRGDQVAIIWEGDDPSQSRHITYRELHDEVCKFA CCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH NILRSRNVEKGDRVTIYLPMIPEAAFAMLACARIGAIHSVVFAGFSPDSLAGRINDCQSK HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCE IVITADEGLRGGKKVPLKANVDAALKKCDGVDWVMVVKRTSAAIEMDDVRDFWYHEAAEM EEEEECCCCCCCCCCCEECCHHHHHHHCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHH VTTECPIEHMHAEDPLFILYTSGSTGQPKGVLHTSGGYLVFASMTHQYVFDYHDGDIYWC HHHCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEEEECCEEEEE TADVGWVTGHSYILYGPLANGATTLMFEGVPNYPTNSRFWDVIDKHKVNIFYTAPTAIRA ECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHH LMQAGDEPVKKTSRKSLRLLGSVGEPINPEAWEWYHRVVGDDRCPIVDTWWQTETGGILI HHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEE TPLPGATKLKPGSATRPFFGVVPEILDPEGVVLEGECTGNLCLARSWPGQMRTVYGDHER ECCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEECCCCCCEEEEECCCCCHHEECCCHHH FEQTYFSAYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVS HHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCC EAAVVGYPHDIKGQGIYAYVTLMAGIEPSEELRKELVAWVRKDIGPIASPDLIQFAPGLP CEEEECCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC KTRSGKIMRRILRKIAEDEPSTLGDTSTLADPAVVDDLVEHRQNKHHKDKVG CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA