Click here to switch to the map view.

The map label for this gene is nrtA [H]

Identifier: 86747434

GI number: 86747434

Start: 348932

End: 350176

Strand: Direct

Name: nrtA [H]

Synonym: RPB_0308

Alternate gene names: 86747434

Gene position: 348932-350176 (Clockwise)

Preceding gene: 86747433

Following gene: 86747435

Centisome position: 6.54

GC content: 64.34

Gene sequence:

>1245_bases
ATGTGCATCAATTGCGGAAATGACATCGTTCATGCCGATGACGATCGCTTCCGGTTCGCGATCAACCGCCGGCAGACGCT
CGACATGCTCGCCGCCGGCGGCCTCGCCGCGCTCGGCACCATGCTGGGCGGCTTCGGCCAATCCGCACGCGCGGCCGACG
ACGACGTCGTCCGCATCGGCTATCTGCCGATCACCGACGCCACCGCGCTCCTGGTCGCGCACGGCATGGGCTACTTCAAG
GACGAGGGTCTCGAGGCCGAGCGCCCGACGCTGATCCGCGGCTGGTCGCCGCTGGTGGAGAGCTTCGCGGCCGGCAAGTT
CAACCTGGTGCATCTGCTCAAGCCGATCCCGGTGTGGATGCGCTACAACAACAACTTCCCGGTCAAGATCATGGCCTGGG
CCCACACCAACGGCTCCGGCGTCGTGGTCGGCGGCGAGAGCGGCATCGCGTCGTTCAAGGATTTCGGCGGCAAGCAGGTC
GCGGTGCCGTTCTGGTACTCGATGCACAACATCGTGCTGCAATACGCGCTGCGCAAATCCGGCATCAAGCCGGTGATCAA
GGGCCAGGGCGAGACGCTCGCGGCCGACGAGTGCAATCTGCAGGTGATGGCGCCGCCCGACATGCCGCCGGCGCTCGCGG
CCAAAAAGATCGACGCCTACATCGTCGCCGAGCCGTTCAACGCGCTGGGCGAAACCAAGGCCGGCGGCCGGATGCTGCGC
TTCACCGGCGACATCTGGAAGAATCACCCCTGCTGCGTGCTGTGCATGAACGAGGAGGTGACCAGAAAGAAGCCGGAATG
GACCCAGAAGGTGATGAACGCCCTGGTCCGCGCCGAGATCTACGCCAGCGCCAACAAGAAGGAAGTCGCCAAGCTGCTGT
CGAAGGACGGCGAAGGCTATCTGCCGCTGCCGGCGCCGGTGATCGAGCGCGCGATGACTTACTACGACGACAAGACCTAT
GGCGAGAGCGGCGCCATTACCCATCCGGACTGGAAGCTCGGCCGGATCGACTTCCAGCCCTGGCCGTATCCGTCGGCGAC
CAAGCTGATCGTCGGCGCGATGAACGAGACGGTGGTCTCGGGCGACACCACCTTCCTGAAGAAGCTCGATCCGGAATTCG
TCGCCAAGGATCTGGTCGACTATCACTTCGTCAAGCAGGCGATGACGAAGTACCCGGACTGGAAGACATCGCCGAGCGTC
AATCCCGACGATCCGTTCGCCCGGACCGAGGTGCTGTCGCTGTGA

Upstream 100 bases:

>100_bases
GCCGGACGCATCGCTGACTCCCGACTCCCACAACCAAGAAACGCCACGGACGGAACCGCTCAAGATCGTCGCTGCCGGCC
ACCGCTGAAAGGATCTCGTA

Downstream 100 bases:

>100_bases
GCCTCGATCTGACGATCGACGACGCCCCGGCACCGGCGGCGGCGGCGCGAAACGCCGCCTTCGCCGGCCGGCTGCGCAGC
TCCGGCCATATCGCGCTCGG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MCINCGNDIVHADDDRFRFAINRRQTLDMLAAGGLAALGTMLGGFGQSARAADDDVVRIGYLPITDATALLVAHGMGYFK
DEGLEAERPTLIRGWSPLVESFAAGKFNLVHLLKPIPVWMRYNNNFPVKIMAWAHTNGSGVVVGGESGIASFKDFGGKQV
AVPFWYSMHNIVLQYALRKSGIKPVIKGQGETLAADECNLQVMAPPDMPPALAAKKIDAYIVAEPFNALGETKAGGRMLR
FTGDIWKNHPCCVLCMNEEVTRKKPEWTQKVMNALVRAEIYASANKKEVAKLLSKDGEGYLPLPAPVIERAMTYYDDKTY
GESGAITHPDWKLGRIDFQPWPYPSATKLIVGAMNETVVSGDTTFLKKLDPEFVAKDLVDYHFVKQAMTKYPDWKTSPSV
NPDDPFARTEVLSL

Sequences:

>Translated_414_residues
MCINCGNDIVHADDDRFRFAINRRQTLDMLAAGGLAALGTMLGGFGQSARAADDDVVRIGYLPITDATALLVAHGMGYFK
DEGLEAERPTLIRGWSPLVESFAAGKFNLVHLLKPIPVWMRYNNNFPVKIMAWAHTNGSGVVVGGESGIASFKDFGGKQV
AVPFWYSMHNIVLQYALRKSGIKPVIKGQGETLAADECNLQVMAPPDMPPALAAKKIDAYIVAEPFNALGETKAGGRMLR
FTGDIWKNHPCCVLCMNEEVTRKKPEWTQKVMNALVRAEIYASANKKEVAKLLSKDGEGYLPLPAPVIERAMTYYDDKTY
GESGAITHPDWKLGRIDFQPWPYPSATKLIVGAMNETVVSGDTTFLKKLDPEFVAKDLVDYHFVKQAMTKYPDWKTSPSV
NPDDPFARTEVLSL
>Mature_414_residues
MCINCGNDIVHADDDRFRFAINRRQTLDMLAAGGLAALGTMLGGFGQSARAADDDVVRIGYLPITDATALLVAHGMGYFK
DEGLEAERPTLIRGWSPLVESFAAGKFNLVHLLKPIPVWMRYNNNFPVKIMAWAHTNGSGVVVGGESGIASFKDFGGKQV
AVPFWYSMHNIVLQYALRKSGIKPVIKGQGETLAADECNLQVMAPPDMPPALAAKKIDAYIVAEPFNALGETKAGGRMLR
FTGDIWKNHPCCVLCMNEEVTRKKPEWTQKVMNALVRAEIYASANKKEVAKLLSKDGEGYLPLPAPVIERAMTYYDDKTY
GESGAITHPDWKLGRIDFQPWPYPSATKLIVGAMNETVVSGDTTFLKKLDPEFVAKDLVDYHFVKQAMTKYPDWKTSPSV
NPDDPFARTEVLSL

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45638; Mature: 45638

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCINCGNDIVHADDDRFRFAINRRQTLDMLAAGGLAALGTMLGGFGQSARAADDDVVRIG
CEEECCCCCEECCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEE
YLPITDATALLVAHGMGYFKDEGLEAERPTLIRGWSPLVESFAAGKFNLVHLLKPIPVWM
EEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEHHCCCEEEE
RYNNNFPVKIMAWAHTNGSGVVVGGESGIASFKDFGGKQVAVPFWYSMHNIVLQYALRKS
EECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHC
GIKPVIKGQGETLAADECNLQVMAPPDMPPALAAKKIDAYIVAEPFNALGETKAGGRMLR
CCCCEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCEEEEECCHHHHCCCCCCCEEEE
FTGDIWKNHPCCVLCMNEEVTRKKPEWTQKVMNALVRAEIYASANKKEVAKLLSKDGEGY
EECHHHCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
LPLPAPVIERAMTYYDDKTYGESGAITHPDWKLGRIDFQPWPYPSATKLIVGAMNETVVS
CCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEECCCCCCCCHHHEEEEECCCEEEC
GDTTFLKKLDPEFVAKDLVDYHFVKQAMTKYPDWKTSPSVNPDDPFARTEVLSL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MCINCGNDIVHADDDRFRFAINRRQTLDMLAAGGLAALGTMLGGFGQSARAADDDVVRIG
CEEECCCCCEECCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEE
YLPITDATALLVAHGMGYFKDEGLEAERPTLIRGWSPLVESFAAGKFNLVHLLKPIPVWM
EEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEHHCCCEEEE
RYNNNFPVKIMAWAHTNGSGVVVGGESGIASFKDFGGKQVAVPFWYSMHNIVLQYALRKS
EECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHC
GIKPVIKGQGETLAADECNLQVMAPPDMPPALAAKKIDAYIVAEPFNALGETKAGGRMLR
CCCCEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCEEEEECCHHHHCCCCCCCEEEE
FTGDIWKNHPCCVLCMNEEVTRKKPEWTQKVMNALVRAEIYASANKKEVAKLLSKDGEGY
EECHHHCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
LPLPAPVIERAMTYYDDKTYGESGAITHPDWKLGRIDFQPWPYPSATKLIVGAMNETVVS
CCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEECCCCCCCCHHHEEEEECCCEEEC
GDTTFLKKLDPEFVAKDLVDYHFVKQAMTKYPDWKTSPSVNPDDPFARTEVLSL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8990301; 11759840; 8982006 [H]