Click here to switch to the map view.

The map label for this gene is 86747429

Identifier: 86747429

GI number: 86747429

Start: 344337

End: 344939

Strand: Reverse

Name: 86747429

Synonym: RPB_0303

Alternate gene names: NA

Gene position: 344939-344337 (Counterclockwise)

Preceding gene: 86747436

Following gene: 86747427

Centisome position: 6.47

GC content: 69.65

Gene sequence:

>603_bases
ATGGTCCAGGCAGCGCCCCATCCCACGATCGATTCGCCGGCGCCCGATGTGCGGATGTCCCCGCGCGATCGGCTGATCGA
AAGCGCCCGCGTGCTGTTCTGCCGCTACGGCATCAACTCGGTCGGGGTCGACGCCATCATCGAGAACGCCGGTACCGCCA
AGACCACCCTGTACAAGCTGTTCGGCTCCAAGGACGGGCTGGTCGAAGCCGTGCTGCAGCGCGAGGGGCAGAGCTGGCGC
ACCTGGTTCATCGACGAGATCGATGGGCCGGGCGGCAGCGCGCGCGAGCGGCTGGCGCGGATCGGCCCGGCGCTGAAGGG
CTGGTTCAGCCGCCCCGATTTTTACGGCTGCCCGTTCATCAATGCGGTCGGCGAATCCGACAAGGCTGACGACCGGATGC
GCAGCCTGGCGATTGCCCACAAGACCATCGTCCACGACCGGCTGACCGCGCTGTGCACCGAGGCCGAGATCGCCGAGCCG
GCGCAGGTGGCGCATACGCTCGGGCTGGTGATCGACGGCGCCATCGTGATGGCGCTGGTGACGCGCGACGCCGGCGCCGC
CGATGTCGCCGGCCGCGCTTGCGCGGCGATCCTGCCGGCGTGA

Upstream 100 bases:

>100_bases
TCGCCCTCTCGGTTGCCTGCATCGGCGTCAGCAAGGTTGCGAACAGACCATTCGGTTTCCCGGATTGCAGTTTGGCAGAG
GCGGGGGTATTTGCGTCTGA

Downstream 100 bases:

>100_bases
GGCTGCAGGTTCAGCGTCCGAACAGTTGGCGCGCGGTTTCGCGGACGAAGAAGATCGAGCTTGCGGCGGTCAGGTGGCTG
CCGTCGTACACCACCGGCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator Protein; Regulatory Protein; Transcriptional Regulator Tetr Family; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulatory Protein; TetR-Family Protein Transcriptional Regulator; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein; Transcriptional Repressor; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENAGTAKTTLYKLFGSKDGLVEAVLQREGQSWR
TWFIDEIDGPGGSARERLARIGPALKGWFSRPDFYGCPFINAVGESDKADDRMRSLAIAHKTIVHDRLTALCTEAEIAEP
AQVAHTLGLVIDGAIVMALVTRDAGAADVAGRACAAILPA

Sequences:

>Translated_200_residues
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENAGTAKTTLYKLFGSKDGLVEAVLQREGQSWR
TWFIDEIDGPGGSARERLARIGPALKGWFSRPDFYGCPFINAVGESDKADDRMRSLAIAHKTIVHDRLTALCTEAEIAEP
AQVAHTLGLVIDGAIVMALVTRDAGAADVAGRACAAILPA
>Mature_200_residues
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENAGTAKTTLYKLFGSKDGLVEAVLQREGQSWR
TWFIDEIDGPGGSARERLARIGPALKGWFSRPDFYGCPFINAVGESDKADDRMRSLAIAHKTIVHDRLTALCTEAEIAEP
AQVAHTLGLVIDGAIVMALVTRDAGAADVAGRACAAILPA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21411; Mature: 21411

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENAGTAKTTLYKL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHH
FGSKDGLVEAVLQREGQSWRTWFIDEIDGPGGSARERLARIGPALKGWFSRPDFYGCPFI
HCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCH
NAVGESDKADDRMRSLAIAHKTIVHDRLTALCTEAEIAEPAQVAHTLGLVIDGAIVMALV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TRDAGAADVAGRACAAILPA
HCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENAGTAKTTLYKL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHH
FGSKDGLVEAVLQREGQSWRTWFIDEIDGPGGSARERLARIGPALKGWFSRPDFYGCPFI
HCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCH
NAVGESDKADDRMRSLAIAHKTIVHDRLTALCTEAEIAEPAQVAHTLGLVIDGAIVMALV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TRDAGAADVAGRACAAILPA
HCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA