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The map label for this gene is yfbG [C]

Identifier: 86747388

GI number: 86747388

Start: 295742

End: 296695

Strand: Direct

Name: yfbG [C]

Synonym: RPB_0262

Alternate gene names: 86747388

Gene position: 295742-296695 (Clockwise)

Preceding gene: 86747386

Following gene: 86747389

Centisome position: 5.55

GC content: 64.47

Gene sequence:

>954_bases
ATGCACATGCGACTTTCTCGACGAATTCTCGTGAGCGGCGGCGCCGGCTTCATCGGCTCGCATCTGTGCGACAAGCTGCT
GGCCGAAGGCCACGAAGTGCTGTGCGTCGACAATTACTTCACCGGCTGGCGGCGCAACATCGAGCATCTGGTCGGCACGC
CGCGCTTCGAGGTGATGCGCCACGACGTCACCTTTCCGCTCTATGTCGAAGTCGACGACATCTACAATCTCGCCTGCCCG
GCCTCGCCGGTGCACTACCAGCACGATCCGGTGCAGACGCTGAAGACCAGCGTGCACGGCGCGATCAACATGCTGGGGTT
GGCCAAGCGCACCCGCGCCAAGATCTTCCAGGCCTCGACCAGCGAGGTCTATGGCGACCCGACCGTGCATCCGCAGCCGG
AGAGCTATTGGGGCCACGTCAATCCGCTGGGCATCCGCGCCTGCTACGACGAGGGCAAGCGCGCCGCCGAGACGCTGTTC
TTCGACTATCACCGCCAGCACAAGGTGCGGATCAAGGTGGCGCGGATCTTCAACACCTACGGCCCGCGGATGCATCCGAA
CGACGGCCGCGTGGTGTCGAACTTCATCGTCCAGGCACTGTCCGGCAACGACATCACCATCTACGGCGACGGCAGCCAGA
CCCGCTCGTTCTGCTACGTCACCGATCTGCTCGACGGCTTCGGCCGGCTGATGGCGAGCGGCGATGAATTCATCGGGCCG
GTCAATCTCGGCAATCCGGTCGAGTTCAGCATTCGGCAGTTGGCCGAGCTGGTGATCGAGATGACGGATTCGACGTCGAA
GATCGTGGCGCGGCCGTTGCCCGCCGACGATCCGAGGCAACGCCAGCCCGACATCGCGCTGGCCCGCAGCGCGCTCGGCT
GGGAGCCGAAGGTCGCACTCGCCGACGGGCTGAAGGAGACCATCTCCTACTTCCGCAAGCTGCTGGCGTCGTGA

Upstream 100 bases:

>100_bases
CCCGCCGGGGCCGGTTTCGGCGCTTGCCTAGCATGGGGTTTCTTGCCATTCAATGCGGCGGACAACGGCCGTCGCGACAT
CGGGGCGGGATCAGCCCGGG

Downstream 100 bases:

>100_bases
GCGACCGGCCGGCGGTCGACTCGATGCCGTACCGGCGCAATGTCGGAATCGCGCTGTTCAACGCCGAAGGCCGGGTGCTG
ATCGGCCGCCGCTTCCGCGA

Product: sugar nucleotide dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHMRLSRRILVSGGAGFIGSHLCDKLLAEGHEVLCVDNYFTGWRRNIEHLVGTPRFEVMRHDVTFPLYVEVDDIYNLACP
ASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIFQASTSEVYGDPTVHPQPESYWGHVNPLGIRACYDEGKRAAETLF
FDYHRQHKVRIKVARIFNTYGPRMHPNDGRVVSNFIVQALSGNDITIYGDGSQTRSFCYVTDLLDGFGRLMASGDEFIGP
VNLGNPVEFSIRQLAELVIEMTDSTSKIVARPLPADDPRQRQPDIALARSALGWEPKVALADGLKETISYFRKLLAS

Sequences:

>Translated_317_residues
MHMRLSRRILVSGGAGFIGSHLCDKLLAEGHEVLCVDNYFTGWRRNIEHLVGTPRFEVMRHDVTFPLYVEVDDIYNLACP
ASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIFQASTSEVYGDPTVHPQPESYWGHVNPLGIRACYDEGKRAAETLF
FDYHRQHKVRIKVARIFNTYGPRMHPNDGRVVSNFIVQALSGNDITIYGDGSQTRSFCYVTDLLDGFGRLMASGDEFIGP
VNLGNPVEFSIRQLAELVIEMTDSTSKIVARPLPADDPRQRQPDIALARSALGWEPKVALADGLKETISYFRKLLAS
>Mature_317_residues
MHMRLSRRILVSGGAGFIGSHLCDKLLAEGHEVLCVDNYFTGWRRNIEHLVGTPRFEVMRHDVTFPLYVEVDDIYNLACP
ASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIFQASTSEVYGDPTVHPQPESYWGHVNPLGIRACYDEGKRAAETLF
FDYHRQHKVRIKVARIFNTYGPRMHPNDGRVVSNFIVQALSGNDITIYGDGSQTRSFCYVTDLLDGFGRLMASGDEFIGP
VNLGNPVEFSIRQLAELVIEMTDSTSKIVARPLPADDPRQRQPDIALARSALGWEPKVALADGLKETISYFRKLLAS

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=309, Percent_Identity=59.2233009708738, Blast_Score=391, Evalue=1e-109,
Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=27.9635258358663, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI1788589, Length=343, Percent_Identity=25.3644314868805, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI48994969, Length=338, Percent_Identity=24.2603550295858, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786974, Length=248, Percent_Identity=28.2258064516129, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=307, Percent_Identity=59.6091205211726, Blast_Score=396, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI115532424, Length=337, Percent_Identity=26.4094955489614, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17568069, Length=336, Percent_Identity=25.8928571428571, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21356223, Length=310, Percent_Identity=61.2903225806452, Blast_Score=411, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35511; Mature: 35511

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMRLSRRILVSGGAGFIGSHLCDKLLAEGHEVLCVDNYFTGWRRNIEHLVGTPRFEVMR
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHH
HDVTFPLYVEVDDIYNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIFQAST
HCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEVYGDPTVHPQPESYWGHVNPLGIRACYDEGKRAAETLFFDYHRQHKVRIKVARIFNTY
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHEEHHHHC
GPRMHPNDGRVVSNFIVQALSGNDITIYGDGSQTRSFCYVTDLLDGFGRLMASGDEFIGP
CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC
VNLGNPVEFSIRQLAELVIEMTDSTSKIVARPLPADDPRQRQPDIALARSALGWEPKVAL
CCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHH
ADGLKETISYFRKLLAS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHMRLSRRILVSGGAGFIGSHLCDKLLAEGHEVLCVDNYFTGWRRNIEHLVGTPRFEVMR
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHH
HDVTFPLYVEVDDIYNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIFQAST
HCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEVYGDPTVHPQPESYWGHVNPLGIRACYDEGKRAAETLFFDYHRQHKVRIKVARIFNTY
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHEEHHHHC
GPRMHPNDGRVVSNFIVQALSGNDITIYGDGSQTRSFCYVTDLLDGFGRLMASGDEFIGP
CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC
VNLGNPVEFSIRQLAELVIEMTDSTSKIVARPLPADDPRQRQPDIALARSALGWEPKVAL
CCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHH
ADGLKETISYFRKLLAS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]