| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 86747253
GI number: 86747253
Start: 136074
End: 137282
Strand: Direct
Name: livK [C]
Synonym: RPB_0126
Alternate gene names: 86747253
Gene position: 136074-137282 (Clockwise)
Preceding gene: 86747251
Following gene: 86747254
Centisome position: 2.55
GC content: 65.92
Gene sequence:
>1209_bases ATGGCTGGGCGCTTCGCGGTGAAACTGGTCTCGGTCGCGGTGGCATTGATGGCGAGCGGTTGGCGGGCCGACGCCGCCGA TCAACCACCGATCCGGATCGGCGACGTCTCCAGCTATTCGGCTCTGCCGATCGGCGCCCGTGGCTATCGGCAGGGCTGGG AGCTCGCGCGCGACGAGATCAACGGCAAAGGCGGCGTGCTGGGCCGGCAGCTCCAGATCATCTCCCGCGACGACGCCGGC AAGCCCGACGCGGCCATCACGCAGGCCGCGCAACTGGTCGACGCGGAGAACGTGGATCTGCTGACCGGGACGATCCTCTC CAATGTCGGCCTCGCCGTCTCCGATTTCGCCAAACGGCGGAAGATCTTCTTCCTGGCCTCGCAGCCCCTGACCGACGCGC TGATCTGGGACAAGCGCAGCCGCTACACTTACCGGCTGCGGCCTTCGACCTACACCCAGACCACCATCCTGGCCCAGGAA GCCGCCAAGCTGCCGGCGCGGCGCTGGGCCACGATCGCACCCAACTACGAGTTCGGGCAGGCGGCCGTCTCCAACTTCAA GCAGGAATTGCGGCGACTCCGACCTGATGTCGAGTTCATTTCCGAGCAATGGCCGCCGCTCGGCAAGATCGATGCGGGCT CGGTCGTGCAGGCGATGGCCGCCGATAACCCGGAGGCGATCTTCAACGTCACCTTCGGGTCCGATCTCGCCCGGCTGGTG CGGGAGGGAACCACGCGCAAGACGTTTGCGAACCGCACCGTCGTCAGCCTCCTGACCGGCGAGCCGGAATATCTGGCGCC GCTGAAGGACGAGGCGCCCGAGGGATGGATCGTGACCGGCTATCCGTGGAACGAGATCGCGACGCCAGAGCACCGCGCCT TCGTCGAGGCCTATCGGGCGCGCTTCAAGGATGCGCCGAACATCGGTGCGCTGATCGGCTACATCAACACGCTGGTGCTC GCCAAAGCGATCGAAACCGCCGGCTCGACCGAGACCGAAGCGCTTCTCGCGGCGATGGAGCACTTGAAAATCGACACGCC GTGCGGGCCGATCTCGTTCCGTGCCGTCGACCATCAGTCCACGCTGGGCATCTACATCGGCAAGCTGGCGGTGAGGGATG GCCAGGGGGTGATGACCGACTGGCGTTATGTCGACGGCGCCACTCACCAGCCGTCGGACGCCGACGTTCTGGCCAAAATC AAAGAGTAG
Upstream 100 bases:
>100_bases CAAGCCTTGCCACTTCTTGGGCGTTGACAATACCTCCAGAACGCATTCTGTTATGTAGTAAGTACTACATTCAATTGCAA CGGGGTCATGGAGGTTCGGG
Downstream 100 bases:
>100_bases CGCCGGCCATCGCCCTCATCACAACGCCACACGCCGTGAAAGACTCCGGAATGAAACTGATCGCCCCCCGCAACAACTGG TATCCGCTGACATGGTCACG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: Transporter Signal Peptide Protein; Amino Acid ABC Transporter Periplasmic Protein; ABC Transporter Periplasmic Protein; ABC Transporter Subunit; Amino Acid ABC Transporter; Histidine Kinase; ABC-Transporter; Branched Amino Acid ABC TRANSPORTER Periplasmic Component; Tat Pathway Signal Sequence Domain-Containing Protein; Aliphatic Amidase Expression-Regulating Protein; ABC-Type Branched-Chain Amino Acid Transport Systems; Branched-Chain Amino Acid ABC Transporter Permease Protein; Signal Protein In Twin-Arginine Translocation Pathway; Exported Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAGRFAVKLVSVAVALMASGWRADAADQPPIRIGDVSSYSALPIGARGYRQGWELARDEINGKGGVLGRQLQIISRDDAG KPDAAITQAAQLVDAENVDLLTGTILSNVGLAVSDFAKRRKIFFLASQPLTDALIWDKRSRYTYRLRPSTYTQTTILAQE AAKLPARRWATIAPNYEFGQAAVSNFKQELRRLRPDVEFISEQWPPLGKIDAGSVVQAMAADNPEAIFNVTFGSDLARLV REGTTRKTFANRTVVSLLTGEPEYLAPLKDEAPEGWIVTGYPWNEIATPEHRAFVEAYRARFKDAPNIGALIGYINTLVL AKAIETAGSTETEALLAAMEHLKIDTPCGPISFRAVDHQSTLGIYIGKLAVRDGQGVMTDWRYVDGATHQPSDADVLAKI KE
Sequences:
>Translated_402_residues MAGRFAVKLVSVAVALMASGWRADAADQPPIRIGDVSSYSALPIGARGYRQGWELARDEINGKGGVLGRQLQIISRDDAG KPDAAITQAAQLVDAENVDLLTGTILSNVGLAVSDFAKRRKIFFLASQPLTDALIWDKRSRYTYRLRPSTYTQTTILAQE AAKLPARRWATIAPNYEFGQAAVSNFKQELRRLRPDVEFISEQWPPLGKIDAGSVVQAMAADNPEAIFNVTFGSDLARLV REGTTRKTFANRTVVSLLTGEPEYLAPLKDEAPEGWIVTGYPWNEIATPEHRAFVEAYRARFKDAPNIGALIGYINTLVL AKAIETAGSTETEALLAAMEHLKIDTPCGPISFRAVDHQSTLGIYIGKLAVRDGQGVMTDWRYVDGATHQPSDADVLAKI KE >Mature_401_residues AGRFAVKLVSVAVALMASGWRADAADQPPIRIGDVSSYSALPIGARGYRQGWELARDEINGKGGVLGRQLQIISRDDAGK PDAAITQAAQLVDAENVDLLTGTILSNVGLAVSDFAKRRKIFFLASQPLTDALIWDKRSRYTYRLRPSTYTQTTILAQEA AKLPARRWATIAPNYEFGQAAVSNFKQELRRLRPDVEFISEQWPPLGKIDAGSVVQAMAADNPEAIFNVTFGSDLARLVR EGTTRKTFANRTVVSLLTGEPEYLAPLKDEAPEGWIVTGYPWNEIATPEHRAFVEAYRARFKDAPNIGALIGYINTLVLA KAIETAGSTETEALLAAMEHLKIDTPCGPISFRAVDHQSTLGIYIGKLAVRDGQGVMTDWRYVDGATHQPSDADVLAKIK E
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43929; Mature: 43798
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRFAVKLVSVAVALMASGWRADAADQPPIRIGDVSSYSALPIGARGYRQGWELARDEI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHC NGKGGVLGRQLQIISRDDAGKPDAAITQAAQLVDAENVDLLTGTILSNVGLAVSDFAKRR CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCC KIFFLASQPLTDALIWDKRSRYTYRLRPSTYTQTTILAQEAAKLPARRWATIAPNYEFGQ EEEEEECCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHCEEECCCCCHHH AAVSNFKQELRRLRPDVEFISEQWPPLGKIDAGSVVQAMAADNPEAIFNVTFGSDLARLV HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHH REGTTRKTFANRTVVSLLTGEPEYLAPLKDEAPEGWIVTGYPWNEIATPEHRAFVEAYRA HCCCCHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH RFKDAPNIGALIGYINTLVLAKAIETAGSTETEALLAAMEHLKIDTPCGPISFRAVDHQS HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TLGIYIGKLAVRDGQGVMTDWRYVDGATHQPSDADVLAKIKE CCEEEEEEEEEECCCCCEECCEEECCCCCCCCCCHHHHEECC >Mature Secondary Structure AGRFAVKLVSVAVALMASGWRADAADQPPIRIGDVSSYSALPIGARGYRQGWELARDEI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHC NGKGGVLGRQLQIISRDDAGKPDAAITQAAQLVDAENVDLLTGTILSNVGLAVSDFAKRR CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCC KIFFLASQPLTDALIWDKRSRYTYRLRPSTYTQTTILAQEAAKLPARRWATIAPNYEFGQ EEEEEECCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHCEEECCCCCHHH AAVSNFKQELRRLRPDVEFISEQWPPLGKIDAGSVVQAMAADNPEAIFNVTFGSDLARLV HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHH REGTTRKTFANRTVVSLLTGEPEYLAPLKDEAPEGWIVTGYPWNEIATPEHRAFVEAYRA HCCCCHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH RFKDAPNIGALIGYINTLVLAKAIETAGSTETEALLAAMEHLKIDTPCGPISFRAVDHQS HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TLGIYIGKLAVRDGQGVMTDWRYVDGATHQPSDADVLAKIKE CCEEEEEEEEEECCCCCEECCEEECCCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA