Click here to switch to the map view.

The map label for this gene is rpmI [H]

Identifier: 86747170

GI number: 86747170

Start: 43356

End: 43556

Strand: Direct

Name: rpmI [H]

Synonym: RPB_0043

Alternate gene names: 86747170

Gene position: 43356-43556 (Clockwise)

Preceding gene: 86747168

Following gene: 86747171

Centisome position: 0.81

GC content: 58.71

Gene sequence:

>201_bases
ATGCCCAAGCTGAAGACCAAATCGGGCGCCAAAAAGCGCTTCAAAGTCACCGCCACCGGCAAGGTGATGTCCGCCCAGCG
CGGCAAGCGCCACGGCATGATCAAGCGCACCAAGAAGCAGATCCGTCAGCTTCGCGGCACCCGCGTGATCTTCAAGACCG
ACGGCGACAACATCAAGAAGTATTTCTTGCCGAACGCCTGA

Upstream 100 bases:

>100_bases
TCGCGAGAGAATAAATCGAGCAACTTCAACGCTCTAACGAGCATTTTGAGCCTGCGCAGCGCCTCACCGGCGCGTTTTGC
GCGTGGCATAGGAGAGCCAA

Downstream 100 bases:

>100_bases
CCGTTCACGCCGCGCCTCTGCGCGGCAGCCTCATCGGGCCGCGTCCGCGCGGCCAAGCAAACCAATTTCAGATGAAGGAG
ATCAGTCATGGCTCGCGTCA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKKYFLPNA

Sequences:

>Translated_66_residues
MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKKYFLPNA
>Mature_65_residues
PKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKKYFLPNA

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706 [H]

Pfam domain/function: PF01632 Ribosomal_L35p [H]

EC number: NA

Molecular weight: Translated: 7575; Mature: 7444

Theoretical pI: Translated: 12.45; Mature: 12.45

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE
YFLPNA
EECCCC
>Mature Secondary Structure 
PKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE
YFLPNA
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]