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The map label for this gene is slyA [C]

Identifier: 86747160

GI number: 86747160

Start: 33043

End: 33582

Strand: Direct

Name: slyA [C]

Synonym: RPB_0033

Alternate gene names: 86747160

Gene position: 33043-33582 (Clockwise)

Preceding gene: 86747159

Following gene: 86747161

Centisome position: 0.62

GC content: 67.22

Gene sequence:

>540_bases
ATGCGGTTTTCCGCGCCGGCACGACATATTGACAGTATGCTGCCATTTTGGCAGTATACTGTCATGACTGATGAAGCTCA
CGCCCCCTTTGACCACCCCGCCAATGCGCTGGTGCTGGAAGTCTTCCGGCTCAACGGCGCGTTGATCCGGTTCGGCGACG
CACTGGTGAAGCCGCTCGGCCTCAGCAGCGCGCGCTGGCAGGTGCTGGGCTCGATCGCGCATGGCCGCGGCACGTTTTCG
GTGGCGCGGCTCGCCGACAATATGGGTCTCGCCCGCCAGTCGGTGCAGCGCATCGTCGACGAATTGGCCGAGGCCGGCCT
GGTCGGCTTCGAAGCCAACCCGGCGCACAAGCGCGCCAAGCTGGTGGTGATGACGCCGCGCGGCGAGCGCGCCTTCGCCC
GCGCCACCGACTTGTGGCGGCCGGTCGCCGACGCGATGGCGGGCGGGCTCGCCGCCCGCGACCTTCGCAAGACCATCGAC
AACCTCGCGGCCCTGCGGGGCCGGCTGGAAGATCAATCCGAAAACGGGAGTTCAGCATGA

Upstream 100 bases:

>100_bases
GCAAGCCGGTTCGCCGCATCGTCCTCTGACATCGACCGAGATCACCAGACCGAGCGTCGCGACGGCGGCGCCGCACGCGG
CCGCAGGAAGCCGTGCGCCG

Downstream 100 bases:

>100_bases
TCAGGACGCTTCACCCGGTTGCCGGGATCATCGCCTTCGTCACCATCCTCTGCTTCTGGCTGTCGACCGTGGTCGTCGAA
CTCGGCGGCGACCAGGCCAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcription Regulator Protein; Regulatory Protein MarR; Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIRFGDALVKPLGLSSARWQVLGSIAHGRGTFS
VARLADNMGLARQSVQRIVDELAEAGLVGFEANPAHKRAKLVVMTPRGERAFARATDLWRPVADAMAGGLAARDLRKTID
NLAALRGRLEDQSENGSSA

Sequences:

>Translated_179_residues
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIRFGDALVKPLGLSSARWQVLGSIAHGRGTFS
VARLADNMGLARQSVQRIVDELAEAGLVGFEANPAHKRAKLVVMTPRGERAFARATDLWRPVADAMAGGLAARDLRKTID
NLAALRGRLEDQSENGSSA
>Mature_179_residues
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIRFGDALVKPLGLSSARWQVLGSIAHGRGTFS
VARLADNMGLARQSVQRIVDELAEAGLVGFEANPAHKRAKLVVMTPRGERAFARATDLWRPVADAMAGGLAARDLRKTID
NLAALRGRLEDQSENGSSA

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19472; Mature: 19472

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIRFGDALVKPLG
CCCCCHHHHHHHHCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC
LSSARWQVLGSIAHGRGTFSVARLADNMGLARQSVQRIVDELAEAGLVGFEANPAHKRAK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LVVMTPRGERAFARATDLWRPVADAMAGGLAARDLRKTIDNLAALRGRLEDQSENGSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIRFGDALVKPLG
CCCCCHHHHHHHHCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC
LSSARWQVLGSIAHGRGTFSVARLADNMGLARQSVQRIVDELAEAGLVGFEANPAHKRAK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LVVMTPRGERAFARATDLWRPVADAMAGGLAARDLRKTIDNLAALRGRLEDQSENGSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA