| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fixI [H]
Identifier: 86747138
GI number: 86747138
Start: 10656
End: 12851
Strand: Reverse
Name: fixI [H]
Synonym: RPB_0011
Alternate gene names: 86747138
Gene position: 12851-10656 (Counterclockwise)
Preceding gene: 86747139
Following gene: 86747137
Centisome position: 0.24
GC content: 69.54
Gene sequence:
>2196_bases ATGTTGATGACCCGGGACTTCTCGCACTACGTCAAGGACGTCGATCCGCAGACCGCGCATCTCGACCTCGCGGTCGAGGG CGTCAGCTGCGCCGGCTGCATGGCCAAGATCGAGCGCGGGCTGTCGGCGATTCCGGACGTGACGCTGGCCCGCGTCAACC TCACCGACCGCCGCCTCGCGGTGGAGTGGAAGAAGGGCGCGGTGGAGCCGGCGCTGTTCATCGATCGGCTCGCCGAACTA GGCTACAAGGCCTATCCCTACGAGCCGGTCCGCGCCGAGGTCGAGGAGACCGAGCGCAGCAAGTTCCTGCTGCGCTGCCT CGGCGTCGCCGCCTTCGCGACCATGAACGTGATGATGCTGTCGGTGCCGGTGTGGGTCGGCGGCGATCTCAGTCCCGAAG CACGCGATTTCTTCCACTGGCTGTCGGCGCTGGTGGTGCTGCCCTGCGCCGCCTATGCGGGCCAGCCGTTCTTCCAGTCG GCCTGGCGCGCGCTGAAGGCCAAGAGCGTCAACATGGACGTGCCGATCACGATCGGCGTGGTGCTGGCGCTGGGCATGTC GCTGGTCGAGACCATCAATCACGCCGAGCACACGTATTTCGATGCGGCGATCATGTTGATCGCCTTCCTGCTGGCGGGCC GCTTCCTCGACCAGAAGATGCGGCAGAAGACCCGCGCGGTCGCCGGCAATCTGGCCGCGCTGAAGGCCGAGACCGCGACC AAATTCGTCGGTCCCGACGAAATCAGCGAAGTGCCGATCGCCGCGGTGCGCGCCGGCGACCTCGTGTTGCTGCGCCCGGG CGAGCGCTGCGCGGTCGACGGCAGCGTGGTCGAGGGCCGCTCCGAGATCGACCAGAGCCTGATCACCGGCGAGACGCTGT ATGTGAAGGCCGAGCGCGGCACCCAGGTCTATGCCGGCACGCTCAACATCTCCGGCACGCTGCGCGTGCGGGTTTCCGCG GCGTCGGAAGGCACGCTGCTCGCCGAGATCACCCGGCTGCTCGACCATGCGCTGCAGGCGCGCTCGCGCTACGTTCGGCT CGCCGATCGTGCCTCGCAGCTCTATGCGCCGGTGGTGCACGCCACCGCGCTGCTCACCGTGATCGGCTGGGTGCTGGCCG GCGCGAGCTGGCACGATGCCATCGTCATCGGCATCGCCGTGCTGATCATCACCTGCCCCTGCGCGCTCGGTCTGGCGATC CCCGCGGTGCAGACGGTGGCCTCGGGCGCGATGTTCCGCGCCGGCGTGTTGCTCAATGCCGGCGACGCAATCGAGCGCGC CGCCGCGGTCGACACCGTCGTGTTCGACAAGACCGGCACGCTGACGCTGCCGGAGCTCGACGTCGTCAACGGCGCCGGCG TGCCCGACGAGGTCTTCCAGCTCGCCGGGCGCCTCGCGCTCGCCAGCCATCATCCGGTCGCCGCCGCGGTGGCGCGCGCC GCCCAGGCCAAGGCGCCGCTGCCCGGTGTCACCGAGGAGCCCGGCCGCGGCGTCCGCGCGCTGTTCGAGGGCGAGGAGCT GCGGCTCGGCAGCCCGGCCTTCTGCGGCGCCGATGCCGAGGCCAACGCCATTCTCAGCGCCGATCCGGAAGTCTCGGTGG TCGCCTTCAGCCGCGGCGATCGGCACACCGTGTTCGCGGTCCGGCAGTTGCTGCGGCCCGACGCCGCCCGGACGATCGAC GCGCTGCTCAATCGCGGCATCGCCGTGGAATTGCTGTCCGGCGACCGCGAGCCGGCGGTGCGGCATGCGGCCGACGCGCT CGGCGTCAGCGCCTGGCGCGCCGGGGTGACGCCGGCCGAGAAGATCGCCCATATCGAGGCCTTGAAGGCGCAGGGGCGCG TGGTGATGATGGTCGGCGACGGCATGAACGACGCGCCGTCACTCGCCGCCGCGCATGTGTCGATGTCGCCGATCAGCGCC ACCCATCTCAGCCAGGCGACCGCCGATCTGGTGTTTCTTGGCAAGGAACTTGCACCGGTATTGGCCGCGATCGACTATTC GCGCAAGGCGATGGCAGTGATGCGGGAGAATCTGACGCTGGCGATCGGCTACAATGTGCTCGCGGTGCCGATTGCGATCG CGGGCCTCGCCACGCCGCTGATCGCCGCATTGGCGATGTCCGGCTCGTCGATCCTGGTGATGCTGAATGCGATGCGCGCC CGTCGGGTCCGCCTGGGGGGTGCGTCATGGAAGTGA
Upstream 100 bases:
>100_bases TGCTGGAGGGCGATCAGAACGGCAACCGCATGTTCTTGTCGAAGAACCGCCTGACGCTGAACTGACGAGCGATCCGGACG AGGATCAAAAGGCGCGCCGC
Downstream 100 bases:
>100_bases TGGTGTTTTTGGTGCCGCTGGCGCTGATGCTGGGGCTGCTCGGTCTGGCGGCGTTCCTGTGGTCGCTGAAGAGCGGCCAA TACGAGGACCTCGACGGCGC
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MLMTRDFSHYVKDVDPQTAHLDLAVEGVSCAGCMAKIERGLSAIPDVTLARVNLTDRRLAVEWKKGAVEPALFIDRLAEL GYKAYPYEPVRAEVEETERSKFLLRCLGVAAFATMNVMMLSVPVWVGGDLSPEARDFFHWLSALVVLPCAAYAGQPFFQS AWRALKAKSVNMDVPITIGVVLALGMSLVETINHAEHTYFDAAIMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETAT KFVGPDEISEVPIAAVRAGDLVLLRPGERCAVDGSVVEGRSEIDQSLITGETLYVKAERGTQVYAGTLNISGTLRVRVSA ASEGTLLAEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTVIGWVLAGASWHDAIVIGIAVLIITCPCALGLAI PAVQTVASGAMFRAGVLLNAGDAIERAAAVDTVVFDKTGTLTLPELDVVNGAGVPDEVFQLAGRLALASHHPVAAAVARA AQAKAPLPGVTEEPGRGVRALFEGEELRLGSPAFCGADAEANAILSADPEVSVVAFSRGDRHTVFAVRQLLRPDAARTID ALLNRGIAVELLSGDREPAVRHAADALGVSAWRAGVTPAEKIAHIEALKAQGRVVMMVGDGMNDAPSLAAAHVSMSPISA THLSQATADLVFLGKELAPVLAAIDYSRKAMAVMRENLTLAIGYNVLAVPIAIAGLATPLIAALAMSGSSILVMLNAMRA RRVRLGGASWK
Sequences:
>Translated_731_residues MLMTRDFSHYVKDVDPQTAHLDLAVEGVSCAGCMAKIERGLSAIPDVTLARVNLTDRRLAVEWKKGAVEPALFIDRLAEL GYKAYPYEPVRAEVEETERSKFLLRCLGVAAFATMNVMMLSVPVWVGGDLSPEARDFFHWLSALVVLPCAAYAGQPFFQS AWRALKAKSVNMDVPITIGVVLALGMSLVETINHAEHTYFDAAIMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETAT KFVGPDEISEVPIAAVRAGDLVLLRPGERCAVDGSVVEGRSEIDQSLITGETLYVKAERGTQVYAGTLNISGTLRVRVSA ASEGTLLAEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTVIGWVLAGASWHDAIVIGIAVLIITCPCALGLAI PAVQTVASGAMFRAGVLLNAGDAIERAAAVDTVVFDKTGTLTLPELDVVNGAGVPDEVFQLAGRLALASHHPVAAAVARA AQAKAPLPGVTEEPGRGVRALFEGEELRLGSPAFCGADAEANAILSADPEVSVVAFSRGDRHTVFAVRQLLRPDAARTID ALLNRGIAVELLSGDREPAVRHAADALGVSAWRAGVTPAEKIAHIEALKAQGRVVMMVGDGMNDAPSLAAAHVSMSPISA THLSQATADLVFLGKELAPVLAAIDYSRKAMAVMRENLTLAIGYNVLAVPIAIAGLATPLIAALAMSGSSILVMLNAMRA RRVRLGGASWK >Mature_731_residues MLMTRDFSHYVKDVDPQTAHLDLAVEGVSCAGCMAKIERGLSAIPDVTLARVNLTDRRLAVEWKKGAVEPALFIDRLAEL GYKAYPYEPVRAEVEETERSKFLLRCLGVAAFATMNVMMLSVPVWVGGDLSPEARDFFHWLSALVVLPCAAYAGQPFFQS AWRALKAKSVNMDVPITIGVVLALGMSLVETINHAEHTYFDAAIMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETAT KFVGPDEISEVPIAAVRAGDLVLLRPGERCAVDGSVVEGRSEIDQSLITGETLYVKAERGTQVYAGTLNISGTLRVRVSA ASEGTLLAEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTVIGWVLAGASWHDAIVIGIAVLIITCPCALGLAI PAVQTVASGAMFRAGVLLNAGDAIERAAAVDTVVFDKTGTLTLPELDVVNGAGVPDEVFQLAGRLALASHHPVAAAVARA AQAKAPLPGVTEEPGRGVRALFEGEELRLGSPAFCGADAEANAILSADPEVSVVAFSRGDRHTVFAVRQLLRPDAARTID ALLNRGIAVELLSGDREPAVRHAADALGVSAWRAGVTPAEKIAHIEALKAQGRVVMMVGDGMNDAPSLAAAHVSMSPISA THLSQATADLVFLGKELAPVLAAIDYSRKAMAVMRENLTLAIGYNVLAVPIAIAGLATPLIAALAMSGSSILVMLNAMRA RRVRLGGASWK
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=789, Percent_Identity=25.7287705956907, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI115529486, Length=844, Percent_Identity=24.8815165876777, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI55743073, Length=561, Percent_Identity=25.8467023172906, Blast_Score=153, Evalue=6e-37, Organism=Escherichia coli, GI1786691, Length=745, Percent_Identity=31.6778523489933, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI1789879, Length=715, Percent_Identity=29.2307692307692, Blast_Score=205, Evalue=7e-54, Organism=Escherichia coli, GI1786914, Length=525, Percent_Identity=26.6666666666667, Blast_Score=112, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17556548, Length=661, Percent_Identity=28.1391830559758, Blast_Score=199, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6319772, Length=621, Percent_Identity=29.951690821256, Blast_Score=235, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6320475, Length=620, Percent_Identity=27.258064516129, Blast_Score=207, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6325221, Length=523, Percent_Identity=23.9005736137667, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6321430, Length=505, Percent_Identity=24.3564356435644, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI221329854, Length=535, Percent_Identity=30.4672897196262, Blast_Score=187, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 77354; Mature: 77354
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMTRDFSHYVKDVDPQTAHLDLAVEGVSCAGCMAKIERGLSAIPDVTLARVNLTDRRLA CCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE VEWKKGAVEPALFIDRLAELGYKAYPYEPVRAEVEETERSKFLLRCLGVAAFATMNVMML EEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE SVPVWVGGDLSPEARDFFHWLSALVVLPCAAYAGQPFFQSAWRALKAKSVNMDVPITIGV EECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH VLALGMSLVETINHAEHTYFDAAIMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KFVGPDEISEVPIAAVRAGDLVLLRPGERCAVDGSVVEGRSEIDQSLITGETLYVKAERG HCCCCCHHCCCCEEEEECCCEEEECCCCCEEECCHHHCCHHHHHHHHHCCCEEEEEECCC TQVYAGTLNISGTLRVRVSAASEGTLLAEITRLLDHALQARSRYVRLADRASQLYAPVVH CEEEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALLTVIGWVLAGASWHDAIVIGIAVLIITCPCALGLAIPAVQTVASGAMFRAGVLLNA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEC GDAIERAAAVDTVVFDKTGTLTLPELDVVNGAGVPDEVFQLAGRLALASHHPVAAAVARA CHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AQAKAPLPGVTEEPGRGVRALFEGEELRLGSPAFCGADAEANAILSADPEVSVVAFSRGD HHCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCEEEECCCCEEEEEECCCC RHTVFAVRQLLRPDAARTIDALLNRGIAVELLSGDREPAVRHAADALGVSAWRAGVTPAE CHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH KIAHIEALKAQGRVVMMVGDGMNDAPSLAAAHVSMSPISATHLSQATADLVFLGKELAPV HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDYSRKAMAVMRENLTLAIGYNVLAVPIAIAGLATPLIAALAMSGSSILVMLNAMRA HHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RRVRLGGASWK HHEECCCCCCC >Mature Secondary Structure MLMTRDFSHYVKDVDPQTAHLDLAVEGVSCAGCMAKIERGLSAIPDVTLARVNLTDRRLA CCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE VEWKKGAVEPALFIDRLAELGYKAYPYEPVRAEVEETERSKFLLRCLGVAAFATMNVMML EEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE SVPVWVGGDLSPEARDFFHWLSALVVLPCAAYAGQPFFQSAWRALKAKSVNMDVPITIGV EECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH VLALGMSLVETINHAEHTYFDAAIMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KFVGPDEISEVPIAAVRAGDLVLLRPGERCAVDGSVVEGRSEIDQSLITGETLYVKAERG HCCCCCHHCCCCEEEEECCCEEEECCCCCEEECCHHHCCHHHHHHHHHCCCEEEEEECCC TQVYAGTLNISGTLRVRVSAASEGTLLAEITRLLDHALQARSRYVRLADRASQLYAPVVH CEEEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALLTVIGWVLAGASWHDAIVIGIAVLIITCPCALGLAIPAVQTVASGAMFRAGVLLNA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEC GDAIERAAAVDTVVFDKTGTLTLPELDVVNGAGVPDEVFQLAGRLALASHHPVAAAVARA CHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AQAKAPLPGVTEEPGRGVRALFEGEELRLGSPAFCGADAEANAILSADPEVSVVAFSRGD HHCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCEEEECCCCEEEEEECCCC RHTVFAVRQLLRPDAARTIDALLNRGIAVELLSGDREPAVRHAADALGVSAWRAGVTPAE CHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH KIAHIEALKAQGRVVMMVGDGMNDAPSLAAAHVSMSPISATHLSQATADLVFLGKELAPV HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDYSRKAMAVMRENLTLAIGYNVLAVPIAIAGLATPLIAALAMSGSSILVMLNAMRA HHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RRVRLGGASWK HHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661920; 12597275 [H]