| Definition | Frankia sp. CcI3 chromosome, complete genome. |
|---|---|
| Accession | NC_007777 |
| Length | 5,433,628 |
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Identifier: 86742425
GI number:
Start: 4485421
End: 4490505
Strand: Direct
Name: Not Available
Synonym: Francci3_3745
Alternate gene names: NA
Gene position: NA
Preceding gene: 86742423
Following gene: 86742427
Centisome position: NA
GC content: NA
Gene sequence:
>5085_bases ATGACGACGCAGACCGCCGGCCCCGAGCGGCATGCCGCCCTCGCGGACCGCTGTCACCGGCTGGTGCGGTTCCTCCATGA GGTCGCGGCGGCCCGGTCGGGCCGGATCCGGACCATCGAGGAGCATCCGCTCACGGTGTGGCTCGCCGACATCCCGGCCG GCGTGCCGCTGTCCGAGCACGCCGGGGCCGGCGAGGTGCTGCTGACCGCCCCCGCCGCCACCGTCCTACCCCCACCGCCG CCACCGCCCGCGATCCTCGCCGGCCAGATCGTGCTGCCCGACGCGGCCGGCGCCGATCCCGACCAGCCGCCGGTGTGGAA CGGCGCCGCCGCCGAGCAGACCGCCGCCGAGCAGACCGCCGCGGCGGCGGCCTACCAGGCCTGGTTGCCGCGATGGCAGC TCTGGGCGACACGCGCGCGCGTTGACGCGGAGCGACGCAATCTGCACAACACGCTGCACGCGGTCGCGGCCCGGGTGGCC CAGGAGGGTGACGCGCTGGAACTCGTGCTGGCGACCGGCCTGCTGACCTGGCAGCCACCGGGCGGCCCCACCGTCCGCGA GCACCTGCTGACCACCCGGCTGACCTGCGACATCGACCCGGTCACCTCCGATATCAGGGTGCGGGTCCCGGCGGGGGCCA CCACGCGCCTCGCCGACGGCCCGCTACTCGACGGCATCGCCGGCTTCCGCCGGGAACGGACGAACGCGCTGCACGAGCGC CTGCGGGGACGACCGTCGGCGCCACTGGGTCCGGACGACATCCGGCTGCTGCGGGACTGGCTGGCGCTGGCGCTCGACGT GCCGACGGACGGCTTCGAACCCGACCTCGCGCCGCCCGCGCCCGACAGCGCGTCACGCCCGCGGGTGACCTTCGCCCCGG CCTTCGTCCTGCGCACCCGTGACCAGGCCGCCCTGCTGACCTACTACGAGCGGATGCTCGACGTCCTGCGGGGTGACGGA CCTCCGCCGCTCGGCCTCGTCCAGCTGGTGGAGACCCTCGACGCCGCCGACCGGTTGGCCTGGCTCGAGGCAGAGGGAGC GACGAGCGGCGCCGAACTCGGTGCGGACCCGCTGCTCCCGCTCCCGGCCAGTCCCGAGCAGGCCCGGGTGCTGGAGCGGC TTCGCCACGACAACGGCGTCGTCGTCGAGGGCCCGCCCGGCACCGGCAAGACGCACACGATCGCCAACCTGGTCTGCGCC TTGCTGGCGGAGGGGCAACGGGTTCTGGTCACCAGCCAGAAGTCGCAAGCCCTGCGGGTCCTGCGGGAGAAACTGCCCCC GGACCTGCAGCGGCTGTGCGTGTCGTTCACCGATACCGAGGAGGCGCGCGACGCACCGGTCGACCAGGCCGGGAACGCGG GGGCGGACCTGGACGGCCGGCCCGACGCAGTCTTCGACCCCGCCCCGGCCGGGGCCGAAGACGAAGCGGACGAGCTTGGC GGCATCGGCGTGGGTTCCCCCGAGCTCGCCGCGAGCGTGAGCGCCCTGGCCGCGGAGAAGGCCACCTATCACCCCGAGGC GCTCGACCGGCGGATCGTGCGGGCCGCCGCGCGCCGGCAGGAGGCGATCCGCGCCCGCGATGTCCTGGCGGACCGGGCCC GCGCCCTGCGGTTGGCCGAGCACACGGTGCATCCGGACAGCGAGGTGGCCGCGGGCTGGGGCGGGACGCGGGCGAGCATC GCGGCGCGGGTCCGGGCCGAGGCCGACGCGTCGCGGTGGCTGCCGCGGCCCGTGCCCCGGAGCGCGGCAGCCACCACCAC CGCGAGGACCACGGCGACGGGGTCCGGGTCTGTCGGCCCTGCGCCGGTTCCCCCGCCGTTGACCGACGCCGAGGCGCTGG AGCTCCACGCCCTGCTGCGATCCGGTCAGGTGCGATCCGGTCAGGTGCGATCCGGTCAGGACGTCGGCGCGGACCGGTCC GCCGGCCCGGTGGTCGAGATGAGCCGATTCCTACCCGCCGAGCGGTTCGCGGACCTGGTGGCCACCGCCCGCGCGGCCGA CGAGGCGGTCCGCCTTGCCCGCGCGGCCGTCCGTCCCGCGACCCGGGGTCTCCTCGACACGCTCGCCGCCGTCGATCCCG CGGTGGTCTCCCTCGATCCGCTACAGCAGGCGGTCGCCAGCCTCTCCCGCGCGCTCGAGGAGCTCGACGGGCGCGGGCAG CGGTCGAACAGACGGCACTGGGTTCCGGCGGCCCTCGACGACGCCCTCGCCGGCCGGGACCGGGTCCTCTGGGCGAAGGT GGCCGCGGCCACGCCGATGATCGCCGAGGCGACGCGGCACGTGACCGAGCTCGGTCTGCACGCGGTCGCCCTTCCGACCT CCGCCTCCCCGGACGGCTCCGCCTCGGCGGCCGACGCCGGCTCCCCGGCGGATCCGGGCTTCGACCCCGCCGCCCTGCTC GCCCGGGGGGAGGCGCTGCGCGAGTACCTCGACGCCGGGGGCGAGCTACGGCGCAGGTTCCGGCCGAAGGTCCAGAAGGA GGCGGACACGCTGCTGACCCGGACGCTGGTGGACGGCGTCGCGCCGACCACCCCGGAGCTGCTCGATCTCGTGCTCGTCC GGCTCCGGGCGGAGGTCGCGGTCGAGGCCGCGACCCGCGGATGGGTCCTGGTCGGGATCGCGCCGCGGCCCACCGATCCC TTCGAGGTACGCCTGTCCCGGCTGGTTGAGGCGCAGGAGGCCGTCACGGAGATCCAGGCGATCGTGGCGGCGCGGAACCG GGTCGTGGCAATCCTGGAGGACATCGTGCCCGGCCGGGCACCGGCGATGGACTCCGCCGAGCGCGTCCGGGATCTCGCGG CCGTCATGGCCGCGCTGCGCCCGATGGCAGCCGCCACCGACGCCGAGCGGGCGCTGGGGGAACTGCGGGAGGGCTACGCC GGGCTTGCCACCGCGGCGGGCACGCCGTCCGAGGTCGCCGAGCTGGCCGGCGCGGTAGCGGCCCGCAATGTGGCCGCGTA CACGCGGACCCGGGCCGCGCTCGCCACCACCATGGCTGCCCGGGAGGTGGCGCTGCGCCGGGACGAGCTGCTCGGCCGGC TGCGCGCGGCGCATCCCGACCTCGCCGATCTCCTCGTCTCGACGGCCGGCGCGACCCGGCCCAATGGAGCGGAGATCTGG CCGGCCAGGCTCGCGGCGTTCACGACCGCCTGGTCCTGGGCGGTGGCCGCGAGCTGGCTGACCGCCACGGCCCCCGGCGC CGCCACGGCCCCCGGCGGCCCGGCTGGACCACCTGTCGATCTGGACGCCGAGCTGGACGCGGCGGAGGACATGGTCGCCG CGGCCACCGCGGAGCTGGCCGGCGCCCGCGCGTGGAAACACTGCCTCGAACGGATGGGCGCCGAGCAGTCGGCCGCGCTG CGCGCCTATGCCGACGCGGTGGCGGCCAGCGGCACCTTCGGCGGCCGCCACGCCGAGCGTTTCCGCCAGGCCGCCCGGGA GGCGATGGAGATCGCCCAGACGGCGGTGCCGGCCTGGGTCATGCCGATCCGGGAGGTGCTGTCGACGATCCCGGCGGTGC GCGACAGCTTCGACGTCGTGATCGTCGACGAAGGCAGTCAGGCCGGGCTCGACAGCCTGTTCCTGCTCTGGCTCGCCCCA CGGGTGATCGTCGTGGGCGACGACCGGCAGTGCACGCCGCCGGTGGAGGTCACGGACGAGCTCGACCGGGTCTTCGACCG GCTGGAGGCCCTGCTGCCGGAGGTGCCGGCGTGGCTACGCGTCGGGTTCACCCCCCGGTCGAGCCTGTTCACGCTGTTGC GAACCCGCTTCGGCGAGGTGATCCGGCTGCGGGAGCACTTCCGGTGCATGCCGGAGATCATCGAGTGGTCGTCGGCCATG TTCTACCGGGACGCGCCGCTGCTTCCCCTGCGCCAGTTTGGCGCCGACCGGCTGCCGCCGCTGGTGGCCCGGTTCGTTCC CCACGGTTTCACCACGGACGCGGGCCTCGGTCCACGCAATCCGGCCGAGGCCGATGCCCTGGTCGCACAGGTGCTCTCCT GCGCCGAGGATCCCCGGTACGCCCGGCTCTCCTTCGGCGTCGTCGTCCCACAGGGCACCGCACAGGCGGCGCTGATCCGC GACCAGCTGGCCGACCGGATGTCCGCCGCCGAGCACCAGCGTCGACGGCTGCGGGTGGGCGTCCCCGCCGACTTCCAGGG TGACGAGCGCGACGTCGTCTTCCTGTCCCTGGTGGTGGCGCCCGACTCGCGCATCACCCCGCTGACCCGGCTGGAGTACC AGCGGCGGTTCAACGTCGCGGCCTCCCGGGCCCGCGACCAGGTCTGGCTGTTCCACTCCGTACCGGTCACCAATCTTGAC CCTCGCGATCTGCGGCACAACTATCTGAGCTACGTGCTGTCCACGACGCACCCGGCGGCCGGCGGCCGCGGCGAGGAGCC CCCGGCACTCGCCGAAGTGCCGACCAACCGTCCGCATCCGGCCTTCGGATCCCTGTTCGAACAGCGGGTCTTCCGGGAGA TCGTCGGCCGCGGCTACCTGGTCACCCCGCAGGTGGAGATCAACGGTCGGCGGGTCGACCTGGTCGTCTCCGGCGGTCGG GCCCGGCTCGCCGTCGAGTGCGACGGGGACGTCGGCTCCGGTCCGGACGAGATCGCGCACGAGTTCGCCCGGGAGCGCGA GCTGCGCCGGGCGGGCTGGCGGTTCTGGCGGGTCCGCCAGTCCGAGTTCGAACTCGACGCCGACGCCGCGTTGGCCTCGT TGTGGCCGCGGCTGGCGAGGGCCGGTATCGCGCCCGTGAACACCGGGGCGCGAGGACTGCGGGACGAGGCCGCCACCGGC CTCCCCCGCGTCGAACATTCCACCGTCCGGGCGAGCGCCGACGAGGCGCTGCACCGGTGGCGGCCCATCGCCCTGTCCGA TCTGGAGGGCCTCGACGACGCACCGCCGGACGCCGATCCGCGCGGTTCGGCCCGTGATTCGGCCCCTGCCCTCCGGCGAG GCACGGGCACGGCCCCGGGCGCCGGTGGGGGAGACTGCTCCCCGCGTGCCGAACGGGTCGGTCAGGCCGGCGGCCCGGTC ACCCCGTCCGGTTCGAACGGCGCCGGCAGGACGTCGGGATCGTGA
Upstream 100 bases:
>100_bases CGGGAGAACAGCGCCGACGGGAGGAAAGTCACGTGTCGACAACCGACGGACGGCGTTTCCCTCCCGGCGCGGGCGCCGGG ATCTCCAGAGCGAGGTCCTG
Downstream 100 bases:
>100_bases TCGTCGTGGGATGCCTCGACACCTGCTCCGGCGCCCGGCCGGTCACGGGGTGTCCGGGCCGCCGGCTTCCGCGTCGATCG GGGGTGAGGCACCGGCCGGC
Product: superfamily I DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1694_residues MTTQTAGPERHAALADRCHRLVRFLHEVAAARSGRIRTIEEHPLTVWLADIPAGVPLSEHAGAGEVLLTAPAATVLPPPP PPPAILAGQIVLPDAAGADPDQPPVWNGAAAEQTAAEQTAAAAAYQAWLPRWQLWATRARVDAERRNLHNTLHAVAARVA QEGDALELVLATGLLTWQPPGGPTVREHLLTTRLTCDIDPVTSDIRVRVPAGATTRLADGPLLDGIAGFRRERTNALHER LRGRPSAPLGPDDIRLLRDWLALALDVPTDGFEPDLAPPAPDSASRPRVTFAPAFVLRTRDQAALLTYYERMLDVLRGDG PPPLGLVQLVETLDAADRLAWLEAEGATSGAELGADPLLPLPASPEQARVLERLRHDNGVVVEGPPGTGKTHTIANLVCA LLAEGQRVLVTSQKSQALRVLREKLPPDLQRLCVSFTDTEEARDAPVDQAGNAGADLDGRPDAVFDPAPAGAEDEADELG GIGVGSPELAASVSALAAEKATYHPEALDRRIVRAAARRQEAIRARDVLADRARALRLAEHTVHPDSEVAAGWGGTRASI AARVRAEADASRWLPRPVPRSAAATTTARTTATGSGSVGPAPVPPPLTDAEALELHALLRSGQVRSGQVRSGQDVGADRS AGPVVEMSRFLPAERFADLVATARAADEAVRLARAAVRPATRGLLDTLAAVDPAVVSLDPLQQAVASLSRALEELDGRGQ RSNRRHWVPAALDDALAGRDRVLWAKVAAATPMIAEATRHVTELGLHAVALPTSASPDGSASAADAGSPADPGFDPAALL ARGEALREYLDAGGELRRRFRPKVQKEADTLLTRTLVDGVAPTTPELLDLVLVRLRAEVAVEAATRGWVLVGIAPRPTDP FEVRLSRLVEAQEAVTEIQAIVAARNRVVAILEDIVPGRAPAMDSAERVRDLAAVMAALRPMAAATDAERALGELREGYA GLATAAGTPSEVAELAGAVAARNVAAYTRTRAALATTMAAREVALRRDELLGRLRAAHPDLADLLVSTAGATRPNGAEIW PARLAAFTTAWSWAVAASWLTATAPGAATAPGGPAGPPVDLDAELDAAEDMVAAATAELAGARAWKHCLERMGAEQSAAL RAYADAVAASGTFGGRHAERFRQAAREAMEIAQTAVPAWVMPIREVLSTIPAVRDSFDVVIVDEGSQAGLDSLFLLWLAP RVIVVGDDRQCTPPVEVTDELDRVFDRLEALLPEVPAWLRVGFTPRSSLFTLLRTRFGEVIRLREHFRCMPEIIEWSSAM FYRDAPLLPLRQFGADRLPPLVARFVPHGFTTDAGLGPRNPAEADALVAQVLSCAEDPRYARLSFGVVVPQGTAQAALIR DQLADRMSAAEHQRRRLRVGVPADFQGDERDVVFLSLVVAPDSRITPLTRLEYQRRFNVAASRARDQVWLFHSVPVTNLD PRDLRHNYLSYVLSTTHPAAGGRGEEPPALAEVPTNRPHPAFGSLFEQRVFREIVGRGYLVTPQVEINGRRVDLVVSGGR ARLAVECDGDVGSGPDEIAHEFARERELRRAGWRFWRVRQSEFELDADAALASLWPRLARAGIAPVNTGARGLRDEAATG LPRVEHSTVRASADEALHRWRPIALSDLEGLDDAPPDADPRGSARDSAPALRRGTGTAPGAGGGDCSPRAERVGQAGGPV TPSGSNGAGRTSGS
Sequences:
NA
Specific function: NA
COG id: COG1112
COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA