Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is glnH [H]

Identifier: 86610271

GI number: 86610271

Start: 2945585

End: 2946514

Strand: Direct

Name: glnH [H]

Synonym: CYB_2850

Alternate gene names: 86610271

Gene position: 2945585-2946514 (Clockwise)

Preceding gene: 86610270

Following gene: 86610276

Centisome position: 96.68

GC content: 62.37

Gene sequence:

>930_bases
ATGGTCTCAAAAAAGCCAATATCCAGCTCAACCGCAAAATGTTGGCCCGCTTGGCTTTCCTGGATCCAGAGGCCTTTACC
CAGGTGGTGGAGGCAGCGCGCCAGTCTCGCGCCTCCTGAGGAGGTTCCGACGGCTATCCAGAAGTCCTTCCTGGCAGCCA
TTCTGGCCCTCGCCTGCCTGGGGAGAGGGATCCCTACTGTGGCTCGTCCTTGGCCGGAGATTGTGGATTCTGGACGGCTG
CGCGTTGCCGTAAAAGACAACTTGAGGCCGCTGGGGTTTCGCACTCCCCAAGGGGATCTGCAGGGGTTTGAGATCGAGCT
GGCTTGTGAGCTGGGATCCCGGCTGTTGGGCTCGGCAGAGGCTGTGGAGTTGGTGCCGGTCTCGAATGTAGAGCGGCTGC
AGGTGCTGGCTGACGGCCAGGTGGATTTGGCCATTGCTCAGATCGGCATTACCCCGGATCGGGCGCGCCAGGTGGAGTTC
ACTTCTGCTTACTATCAGGATGGCCCCAGCTTGGTTGTGGCTCGTTCCCACAACTGGGAAAGCTGGTCGGACTTGCGGGG
CGGTCGCGTTGCAGTCTTGCGCGGTTCCAGCGCCATTCCCCTGCTGAATCGATACCTGCCAGGGGTGGAGTTGGTGCCTG
TCGATTCCTACCGAGAAGGGGCGGAACTGCTCCTGAAAGGGGCGGTGCAGGGGTGGGCAGCAGATCGCTCGGTGCTGGCA
GGGTGGCTAGCAGAGCATCCCCGTCGCGAAAGCGCTGCGGAGCAACAGTTTCAATTTCTGGGATCCCCCTTGGCAACGGT
GGGGCTGGGCATTGCCATGCCCAAGGGGCTGCAGCACGCCGAATTGCGGCTGCGGGTGCGCCGAGAACTGGAGAATTTGC
GGGCTGAGGGCTGGCTGGCAGAGCGGGCCAGAGCCTGGGGGTTGCCCTAA

Upstream 100 bases:

>100_bases
CGGGATCGCCGCCGCAAGAAGCGGGATTTTCGTCGCCTATGGATTACCCGCATCAACGCGGCCACCCGTGCCCAGGGCCT
GCGTTACCACGAGTTCATCG

Downstream 100 bases:

>100_bases
AGTTGAGGATACTTGCTACTCTTTGTCTCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCG
ATAGCATTCTGTTTGTTTCC

Product: amino acid transporter, periplasmic amino acid-binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL
RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF
TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA
GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP

Sequences:

>Translated_309_residues
MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL
RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF
TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA
GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP
>Mature_309_residues
MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL
RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF
TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA
GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787088, Length=234, Percent_Identity=26.0683760683761, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787085, Length=213, Percent_Identity=26.2910798122066, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 34032; Mature: 34032

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GRGIPTVARPWPEIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAE
CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCC
AVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEFTSAYYQDGPSLVVARSHNWE
CEEEEECCCHHHEEEEECCCEEEEEEEECCCCCHHHEEEHHHHHHCCCCCEEEEECCCCC
SWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA
CHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLA
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH
ERARAWGLP
HHHHHCCCC
>Mature Secondary Structure
MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GRGIPTVARPWPEIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAE
CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCC
AVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEFTSAYYQDGPSLVVARSHNWE
CEEEEECCCHHHEEEEECCCEEEEEEEECCCCCHHHEEEHHHHHHCCCCCEEEEECCCCC
SWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA
CHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLA
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH
ERARAWGLP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]