| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610185
Identifier: 86610185
GI number: 86610185
Start: 2855903
End: 2857357
Strand: Direct
Name: 86610185
Synonym: CYB_2759
Alternate gene names: NA
Gene position: 2855903-2857357 (Clockwise)
Preceding gene: 86610184
Following gene: 86610186
Centisome position: 93.74
GC content: 60.96
Gene sequence:
>1455_bases TTGGCGGCCCTGAGCCAATATCTGCAATGGGTTAGCGGGATCTATAGCTTTATCGCCCCCCATTCGTTGCCGCTGGCGGA TCTGGCAGTGGCCGGGATCCTGGGAGGGACAGCAGCAGCAGGTCTGGCAGCGCGCCATTGGTGGCAGCAGGCTGGCCGAC GGCAAAGTACTCCAAACCAGCGGACACAACCGCTGCGGCGGGTTAAGTTAACTCGGAATCAGGTGCAAGCCGATCTGGAA GATGCCGATCGCCTGATCCAGAAGCTGCAGAATGACATCAGTCGCCGTGCCCTGCGTGCCAAGCTGCAAGAGATCAATCA GCGGCTTAACCAGGAGGAATTGCATCTGGTGGTGTTCGGCACCAGTTCCGCCGGCAAGACCTCGTTGATCAATGCCTTGA TGGGCCGACCAGTGGGCGAAACAGCCCCCACCCTGGGCACCACCCAGCAGGGATCCATCCACACCTACCAATTGGAGGGC TGGAACGGCCCCATTTCCCTTACCGACACACCTGGGCTGCTGACGATTGGGGGAGCAGGTGAAGCGGAAGCCCGCGCCCT GGCCCAGAAGGCGGATCTGCTGATCTTGGTGGTGGCCGGAGACCTGCTGGCTTCGGAGTATGCCGAAATGCTGGAGTTGG CCCGGCTGGGCAAATCCGCCATCCTGGCCCTCAACAAAACCGATCAGATGCTGCCGGAGGATGTAGAGACCATCTTGGCC CATTTGCGCCGACGCACCGCCGGTGTTATCCCTGCCGAACAGGTGGTGGCCATCGCCGCTGATCCAGAGCCCCTCAAGGT TCGCTACTACTCCGAAGATGGCTCTGTGTGGGAAACTTGGGAGCCGCAGCCCCCCGAGACAGAGGCCCTCATTCAACAAA TGGCTCACCTGCTGCAGCAGAAGGGATCCCACCTGCGCTTGGCCAATGCCTTGTTGCAAACCCGAACTCTCAGCGAAGCC GTCCAGCAGGCCCTCCAAGAAGAACGTCGCCAACAGGGTCGCCAGATCGTGGAACGGATGCAGTGGGCCACCGCTGCTGC CCTGGCGGCAAACCCTCTTCCTGCTTTGGATGTGCTGGCAGGAGTAGCCATTCAGGCGCGCATGATTGGGGAACTGCACC AGGTGTTTGACCGACGCATTACCTTACGCCGGGCCCAGCAAATCGCCCAGAGTTTGGCGCAAATGGTGGTGCAACTGGGG GGGCTGGAGCTGGCCACTCAGGCTTTGGGCTCTCTGCTCAAGGCCAGCCCCTTGATGGTTATGGGGATCCCCCTGCAGGC AGTGACGGGGGCCTATCTGACACGGGTGGCGGGGCTCAGTTACCTAGAGTGGCTGTCCTCTGGGGATCCCTGGCAAGAGG AAATCCTGCAAGAGCGGATTAGGCAGCAGCTCCAAAACCGTCATCCTCTGGCCTTTCTCACCCAACTGGCCCGCCAAGCC CATTCCAACAGCTAG
Upstream 100 bases:
>100_bases TCAGCAATTTTGGGTTGCTTGATTTGAAGATTTGGGCAGGCTGTGGGTTGGGATGGTGCTGTCGCGCTCCACTTGGGTGT GGTTGTGGGCAGGGCTGGGT
Downstream 100 bases:
>100_bases TCCAAGCATCCGTCTTTTCGCCGCCACAGGCCCAACCTATCCCGTTCTCCGCCCGCTGCGGAAAATCCATTACTCCATTA CACTGAATACAGCTTTCTAA
Product: GTP-binding domain-containing protein
Products: NA
Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1-Like Protein; GTPase SAR1 And Related Small G Protein
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLE DADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEG WNGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEA VQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLG GLELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA HSNS
Sequences:
>Translated_484_residues MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLE DADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEG WNGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEA VQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLG GLELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA HSNS >Mature_483_residues AALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLED ADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGW NGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILAH LRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEAV QQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGG LELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQAH SNS
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53059; Mature: 52927
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RTQPLRRVKLTRNQVQADLEDADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGWNGPISLTDTPGLLTIGGAG CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCC EAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA CHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHCCHHHHHHHHH HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQ HHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH KGSHLRLANALLQTRTLSEAVQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGGLELATQALGSLLKASPLMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE MGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HSNS CCCC >Mature Secondary Structure AALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RTQPLRRVKLTRNQVQADLEDADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGWNGPISLTDTPGLLTIGGAG CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCC EAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA CHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHCCHHHHHHHHH HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQ HHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH KGSHLRLANALLQTRTLSEAVQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGGLELATQALGSLLKASPLMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE MGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HSNS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA