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The map label for this gene is psbV

Identifier: 86609972

GI number: 86609972

Start: 2643696

End: 2644193

Strand: Direct

Name: psbV

Synonym: CYB_2539

Alternate gene names: 86609972

Gene position: 2643696-2644193 (Clockwise)

Preceding gene: 86609971

Following gene: 86609976

Centisome position: 86.77

GC content: 58.84

Gene sequence:

>498_bases
ATGCCGCATCTGGATCAGAAGTTGCCTATGAGATGGCGGATCCCGTCTCGCCTCTGGGCCTGGGTCGGGATCCTAGCTTT
GTTGTGGCTGGGGCTGGCCAGTCCGGTGGCTGCCCGCATTGATCCTTACGTGAACCAGTATTTGCGGGTGAGTGGCCCTG
TGGAATTGCCTCTAGATGCCGCAGGGCATACCCTCACCTTTACCCCAGAGCAGCTCACGGACGGCAAAAATCGTTTTCAG
TCCGCCTGTTTGAATTGTCATGTGGGCGGTGCCACTTTGCCGGCTCCCAACATTTCCCTCTCTTTGAAGGACTTGCGCGG
TGCCACTCCACCCCGAGATACCCTTCAAGCCTTGATGGAGTACCAGCGGGATCCCCGCAGCTACGATGGCTCGGATTCCA
GCTATGGATGCCGACCTGTACCCCCTTCCTGGATGGACGACGAAGCCGTAAACTACCCGGCTCCGACCGCTAAGCGGTAC
GGAGCGGGCTTTCAGTAG

Upstream 100 bases:

>100_bases
TGAAGCTGATTGCGGGCTACATTCTGGTGCAGGCCAAGACCGTTCCCGGCTGGGGTGGTACCAAGAACGAAAGCCACAGC
GACCTATCAGCCTATCTCTA

Downstream 100 bases:

>100_bases
CCCTGAGCCTGTTCTGCTCTACCAGAGAACAAAACAGGCCCGAACCTCTAGGCTGGTTTACGGCAGCCCCCAAGAGCGCA
ATCACATTCGCACCATTCAA

Product: cytochrome c-550

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPHLDQKLPMRWRIPSRLWAWVGILALLWLGLASPVAARIDPYVNQYLRVSGPVELPLDAAGHTLTFTPEQLTDGKNRFQ
SACLNCHVGGATLPAPNISLSLKDLRGATPPRDTLQALMEYQRDPRSYDGSDSSYGCRPVPPSWMDDEAVNYPAPTAKRY
GAGFQ

Sequences:

>Translated_165_residues
MPHLDQKLPMRWRIPSRLWAWVGILALLWLGLASPVAARIDPYVNQYLRVSGPVELPLDAAGHTLTFTPEQLTDGKNRFQ
SACLNCHVGGATLPAPNISLSLKDLRGATPPRDTLQALMEYQRDPRSYDGSDSSYGCRPVPPSWMDDEAVNYPAPTAKRY
GAGFQ
>Mature_164_residues
PHLDQKLPMRWRIPSRLWAWVGILALLWLGLASPVAARIDPYVNQYLRVSGPVELPLDAAGHTLTFTPEQLTDGKNRFQS
ACLNCHVGGATLPAPNISLSLKDLRGATPPRDTLQALMEYQRDPRSYDGSDSSYGCRPVPPSWMDDEAVNYPAPTAKRYG
AGFQ

Specific function: Possible low-potential cytochrome c (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PsbV subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBV2_SYNJB (Q2JIS7)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_478734.1
- ProteinModelPortal:   Q2JIS7
- SMR:   Q2JIS7
- STRING:   Q2JIS7
- GeneID:   3902065
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_2539
- TIGR:   CYB_2539
- eggNOG:   NOG42755
- HOGENOM:   HBG285698
- OMA:   NCKNCHV
- ProtClustDB:   PRK13621
- BioCyc:   SSP321332:CYB_2539-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_01378
- InterPro:   IPR009056
- InterPro:   IPR017490
- Gene3D:   G3DSA:1.10.760.10
- TIGRFAMs:   TIGR03046

Pfam domain/function: SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 18261; Mature: 18130

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS51007 CYTC

Important sites: BINDING 83-83 BINDING 86-86

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLDQKLPMRWRIPSRLWAWVGILALLWLGLASPVAARIDPYVNQYLRVSGPVELPLDA
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHEECCCCCCCCCCC
AGHTLTFTPEQLTDGKNRFQSACLNCHVGGATLPAPNISLSLKDLRGATPPRDTLQALME
CCCEEEECHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHH
YQRDPRSYDGSDSSYGCRPVPPSWMDDEAVNYPAPTAKRYGAGFQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
PHLDQKLPMRWRIPSRLWAWVGILALLWLGLASPVAARIDPYVNQYLRVSGPVELPLDA
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHEECCCCCCCCCCC
AGHTLTFTPEQLTDGKNRFQSACLNCHVGGATLPAPNISLSLKDLRGATPPRDTLQALME
CCCEEEECHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHH
YQRDPRSYDGSDSSYGCRPVPPSWMDDEAVNYPAPTAKRYGAGFQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA