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The map label for this gene is slyA [C]

Identifier: 86609954

GI number: 86609954

Start: 2619379

End: 2619876

Strand: Direct

Name: slyA [C]

Synonym: CYB_2520

Alternate gene names: 86609954

Gene position: 2619379-2619876 (Clockwise)

Preceding gene: 86609951

Following gene: 86609955

Centisome position: 85.97

GC content: 57.23

Gene sequence:

>498_bases
ATGGTTCAATCGGAAAAGCAGGCTTTCCTGGAACGGTGGCATGACATTCTCGCCCCCAACTCCCTGGGCTACCGCATTCG
ATTGTTGTCTCAATTGGTGCGGCGGAAGTTGCAGTCTCATTTGGAGCCTTTTGGCCTGACCATCTCCCATTGGGTGGTGC
TCTGCTGCCTTTGGGAAGAAGACGGGATCCCTACTTCCACTATTTGTGAGCGCTTGCAGCAGTTGGGGGGCACCATGACC
GGGGTGTTGGATGGCATGGAAAAACGGGAGCTGATCCGGCGGCAGCGAGATCCTGAGGATCGGCGGATTTGGCGGGTCTA
CCTCACACCTGCAGGGGAGGAGCTGAAAGACGTTTTACCCCCTCTGATTTGGCAGTTGCGGGAGCAAACCTACGGCTGTC
TCAGCCTAGAAGAACAGGCAACCCTCTCGCGGTTGGTGGATCGGCTGATCGCCCATCTGTCAGCTAGAAATCGCAGGAGC
CCCGCACTGTACCCGTAG

Upstream 100 bases:

>100_bases
CGTAAGCTCCTTCTCTCCTTCTCCTCAGTAAAAGATAAAATAGGGCGATTTAGATTCCGAGCATTCCAGGCCGCCGATGG
GAAACAGTCAAACCGGGGAG

Downstream 100 bases:

>100_bases
GGTCAGTGCCGGGAGGAATGCGCTTTGATGAAGTACAATGAACTTATGACCCAAGTCCTGACCGTATCCTGCAAGCTCAA
GGCGTCCCAGTCGCAAGCCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; HTH-Type Transcriptional Regulator; MarR Family Protein; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVQSEKQAFLERWHDILAPNSLGYRIRLLSQLVRRKLQSHLEPFGLTISHWVVLCCLWEEDGIPTSTICERLQQLGGTMT
GVLDGMEKRELIRRQRDPEDRRIWRVYLTPAGEELKDVLPPLIWQLREQTYGCLSLEEQATLSRLVDRLIAHLSARNRRS
PALYP

Sequences:

>Translated_165_residues
MVQSEKQAFLERWHDILAPNSLGYRIRLLSQLVRRKLQSHLEPFGLTISHWVVLCCLWEEDGIPTSTICERLQQLGGTMT
GVLDGMEKRELIRRQRDPEDRRIWRVYLTPAGEELKDVLPPLIWQLREQTYGCLSLEEQATLSRLVDRLIAHLSARNRRS
PALYP
>Mature_165_residues
MVQSEKQAFLERWHDILAPNSLGYRIRLLSQLVRRKLQSHLEPFGLTISHWVVLCCLWEEDGIPTSTICERLQQLGGTMT
GVLDGMEKRELIRRQRDPEDRRIWRVYLTPAGEELKDVLPPLIWQLREQTYGCLSLEEQATLSRLVDRLIAHLSARNRRS
PALYP

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19286; Mature: 19286

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSEKQAFLERWHDILAPNSLGYRIRLLSQLVRRKLQSHLEPFGLTISHWVVLCCLWEE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
DGIPTSTICERLQQLGGTMTGVLDGMEKRELIRRQRDPEDRRIWRVYLTPAGEELKDVLP
CCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH
PLIWQLREQTYGCLSLEEQATLSRLVDRLIAHLSARNRRSPALYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVQSEKQAFLERWHDILAPNSLGYRIRLLSQLVRRKLQSHLEPFGLTISHWVVLCCLWEE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
DGIPTSTICERLQQLGGTMTGVLDGMEKRELIRRQRDPEDRRIWRVYLTPAGEELKDVLP
CCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH
PLIWQLREQTYGCLSLEEQATLSRLVDRLIAHLSARNRRSPALYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA