Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609930

Identifier: 86609930

GI number: 86609930

Start: 2590989

End: 2591216

Strand: Direct

Name: 86609930

Synonym: CYB_2496

Alternate gene names: NA

Gene position: 2590989-2591216 (Clockwise)

Preceding gene: 86609929

Following gene: 86609934

Centisome position: 85.04

GC content: 54.82

Gene sequence:

>228_bases
ATGCCGCATACAATTGTCACCGATATCTGTGAAGGTGTGGCCGACTGTGTAGAGGCTTGCCCTGTTGCCTGCATCCACCC
CGGCGATACCAAAAATGCCAAAGGCACCGACTACTTTTGGATTGAGTTTTCCACCTGCATCGACTGTGGCATCTGTTTAC
AGGTCTGCCCCGTAGAGGGCGCTATTCTGCCGGAGGAAAAGCCGCATCTGCAGCGAGTGCCCCGCTAA

Upstream 100 bases:

>100_bases
ATCAAAAAGTCAAAAGCATAGGAAGCGCAGGCGACGTCAAGGCTGACCTTGTGGCAACTGCACTTAGAATTTGACTTAGA
GCAATCATTGGGAGGGATCC

Downstream 100 bases:

>100_bases
TTCCAGGGAAGCATCCCTGGCCACACGCCGGGATTCAACGAGAATTACAATCATTTCAATTCCAACCAGGACGCTGCACC
CACACCTAAAGCCCTGGTCG

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 4Fe-4S; Ferredoxin Like Protein; NADHUbiquinone Oxidoreductase Chain I-Like Protein

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR

Sequences:

>Translated_75_residues
MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR
>Mature_74_residues
PHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8186; Mature: 8054

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEG
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHCCCCEEEECCCCC
AILPEEKPHLQRVPR
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEG
CCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHCCCCEEEECCCCC
AILPEEKPHLQRVPR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA