| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609930
Identifier: 86609930
GI number: 86609930
Start: 2590989
End: 2591216
Strand: Direct
Name: 86609930
Synonym: CYB_2496
Alternate gene names: NA
Gene position: 2590989-2591216 (Clockwise)
Preceding gene: 86609929
Following gene: 86609934
Centisome position: 85.04
GC content: 54.82
Gene sequence:
>228_bases ATGCCGCATACAATTGTCACCGATATCTGTGAAGGTGTGGCCGACTGTGTAGAGGCTTGCCCTGTTGCCTGCATCCACCC CGGCGATACCAAAAATGCCAAAGGCACCGACTACTTTTGGATTGAGTTTTCCACCTGCATCGACTGTGGCATCTGTTTAC AGGTCTGCCCCGTAGAGGGCGCTATTCTGCCGGAGGAAAAGCCGCATCTGCAGCGAGTGCCCCGCTAA
Upstream 100 bases:
>100_bases ATCAAAAAGTCAAAAGCATAGGAAGCGCAGGCGACGTCAAGGCTGACCTTGTGGCAACTGCACTTAGAATTTGACTTAGA GCAATCATTGGGAGGGATCC
Downstream 100 bases:
>100_bases TTCCAGGGAAGCATCCCTGGCCACACGCCGGGATTCAACGAGAATTACAATCATTTCAATTCCAACCAGGACGCTGCACC CACACCTAAAGCCCTGGTCG
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 4Fe-4S; Ferredoxin Like Protein; NADHUbiquinone Oxidoreductase Chain I-Like Protein
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR
Sequences:
>Translated_75_residues MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR >Mature_74_residues PHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQRVPR
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8186; Mature: 8054
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 10.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEG CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHCCCCEEEECCCCC AILPEEKPHLQRVPR CCCCCCCCCCCCCCC >Mature Secondary Structure PHTIVTDICEGVADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEG CCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHCCCCEEEECCCCC AILPEEKPHLQRVPR CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA