| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609853
Identifier: 86609853
GI number: 86609853
Start: 2514926
End: 2515690
Strand: Direct
Name: 86609853
Synonym: CYB_2418
Alternate gene names: NA
Gene position: 2514926-2515690 (Clockwise)
Preceding gene: 86609852
Following gene: 86609854
Centisome position: 82.55
GC content: 63.01
Gene sequence:
>765_bases GTGAACCTGGCCAGAGGGCGCAAAGCGGGCGCTCAGACAGCGCCGGCACAAGGTTCGGAAACGCCAACAACCCCAGGGTC TATAGAGTTCACTCCCGGCTCCAGCTCGCAGGGGCTGCAACTGACTTGGCTGCACCACAGTTGTGTTTTGTTCGAGGGGG AGGGCCAACGGTTTCTGGTCAACCCGTTTCGGCCGGCGGGCTGTACGGCTGGCTATCCTGCCCCACGAGTTGCTGCCGAT CTGGTGTTGCTCAGCAGCCGCTTGTTGGATGAGGGTGCTTTGGATGTGGTGCCCGGCAACCCCAAGGTGCTGTTTCAGCC GGGAGACTATCTGATTGACGGGATCCGGGTGCAAGGAGTACGCATGCCCCGTGGCCCTCGCTTTGGCGTAAACGTGGGTT GGCGCTGGCGCATGGCTGGGATCGACATTGTCCATTTGGGAGGGGCGCTGCAGCCAATTACGCGGGAGCAGTCCATCCTG CTTGCTCGTCCCGACCTGTTGCTGGTGCCAGTGGGGGGTGGGCCGAAAAATTACGATCCTGCCGGGGCCAAGGCGGCCAT TGAGGCGCTGCAGCCCAAGCTGGTCATCCCCACCATGTATCGCACGGCCGCCGCCGAGGAATCCCAATGCGAGCTGCTGC CGCTGCAGGAGTTTTTGCGTCTCTTCCCCGCTGCTGCCCCGCAACCTGCCCTCAGCAACCCGTTGCTGCTCTCGGCCCAG GCTCTGCCCAGGCAGGGGCTCGCCATCCTTTTCTTTGAGGAATAG
Upstream 100 bases:
>100_bases AACCTCAGGAAACCGTTGCCGTTGTTACATCAGGGATCCCCACTCCATGAAGCGTCGCCAGCTTCTGCAAGCCAGCGCTG GGCTACTGGGATCGATGGCC
Downstream 100 bases:
>100_bases GGCTATGCGAGGTCAGGTCCTAAAAATCGCTGTCGGACTGGGATCCCTGCTAGTGGGGGGTCTGGGATTCTATGGATACT CCCTACCAGAAGATCCACAA
Product: metallo-beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Metallo-Beta-Lactamase Superfamily Hydrolase; Hydrolase Metallo-Beta-Lactamase Family Protein; Zinc-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zn-Dependent Hydrolases Of Beta-Lactamase Fold; Inactivated Zn-Dependent Hydrolase Of Beta-Lactamase Fold
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNLARGRKAGAQTAPAQGSETPTTPGSIEFTPGSSSQGLQLTWLHHSCVLFEGEGQRFLVNPFRPAGCTAGYPAPRVAAD LVLLSSRLLDEGALDVVPGNPKVLFQPGDYLIDGIRVQGVRMPRGPRFGVNVGWRWRMAGIDIVHLGGALQPITREQSIL LARPDLLLVPVGGGPKNYDPAGAKAAIEALQPKLVIPTMYRTAAAEESQCELLPLQEFLRLFPAAAPQPALSNPLLLSAQ ALPRQGLAILFFEE
Sequences:
>Translated_254_residues MNLARGRKAGAQTAPAQGSETPTTPGSIEFTPGSSSQGLQLTWLHHSCVLFEGEGQRFLVNPFRPAGCTAGYPAPRVAAD LVLLSSRLLDEGALDVVPGNPKVLFQPGDYLIDGIRVQGVRMPRGPRFGVNVGWRWRMAGIDIVHLGGALQPITREQSIL LARPDLLLVPVGGGPKNYDPAGAKAAIEALQPKLVIPTMYRTAAAEESQCELLPLQEFLRLFPAAAPQPALSNPLLLSAQ ALPRQGLAILFFEE >Mature_254_residues MNLARGRKAGAQTAPAQGSETPTTPGSIEFTPGSSSQGLQLTWLHHSCVLFEGEGQRFLVNPFRPAGCTAGYPAPRVAAD LVLLSSRLLDEGALDVVPGNPKVLFQPGDYLIDGIRVQGVRMPRGPRFGVNVGWRWRMAGIDIVHLGGALQPITREQSIL LARPDLLLVPVGGGPKNYDPAGAKAAIEALQPKLVIPTMYRTAAAEESQCELLPLQEFLRLFPAAAPQPALSNPLLLSAQ ALPRQGLAILFFEE
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27154; Mature: 27154
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLARGRKAGAQTAPAQGSETPTTPGSIEFTPGSSSQGLQLTWLHHSCVLFEGEGQRFLV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEEEECCCCEEEE NPFRPAGCTAGYPAPRVAADLVLLSSRLLDEGALDVVPGNPKVLFQPGDYLIDGIRVQGV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCEEEECEEEEEE RMPRGPRFGVNVGWRWRMAGIDIVHLGGALQPITREQSILLARPDLLLVPVGGGPKNYDP ECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCC AGAKAAIEALQPKLVIPTMYRTAAAEESQCELLPLQEFLRLFPAAAPQPALSNPLLLSAQ CCHHHHHHHHCCEEEECHHHHHHCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCEEEEEC ALPRQGLAILFFEE CCCCCCEEEEEEEC >Mature Secondary Structure MNLARGRKAGAQTAPAQGSETPTTPGSIEFTPGSSSQGLQLTWLHHSCVLFEGEGQRFLV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEEEECCCCEEEE NPFRPAGCTAGYPAPRVAADLVLLSSRLLDEGALDVVPGNPKVLFQPGDYLIDGIRVQGV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCEEEECEEEEEE RMPRGPRFGVNVGWRWRMAGIDIVHLGGALQPITREQSILLARPDLLLVPVGGGPKNYDP ECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCC AGAKAAIEALQPKLVIPTMYRTAAAEESQCELLPLQEFLRLFPAAAPQPALSNPLLLSAQ CCHHHHHHHHCCEEEECHHHHHHCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCEEEEEC ALPRQGLAILFFEE CCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA