| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ppnK [H]
Identifier: 86609817
GI number: 86609817
Start: 2483164
End: 2484087
Strand: Direct
Name: ppnK [H]
Synonym: CYB_2378
Alternate gene names: 86609817
Gene position: 2483164-2484087 (Clockwise)
Preceding gene: 86609816
Following gene: 86609821
Centisome position: 81.5
GC content: 60.39
Gene sequence:
>924_bases ATGACCAAGCCCAAAGCCGGGATCCTCTACAACGACGCCAAACCCGCCGCCAAACGCAGCAGCGAAACCCTAGCCCGCTG GTTTCAGGAGCAGGGCTGGGAAGTCTGTGTGGCCCCCAACTGGGGCGGTATCCTCGGTTATGCCAAGCCCGACAGCCCCA TCTGCCTGACCAAAGTAGATAGCCTGGCCCCGGCTGGATTTGATCAAACCATGAAGTTTGCGGTGGTGTTGGGGGGAGAT GGCACCGTCTTGGCAGCAGCACGGCAACTGGCCCCCAAAGGGATCCCCTTGTTGGCGGTGAATACGGGCCATCTGGGCTT TCTGACGGAGACCTACCTTCCTCACCTAGAAGAGGCAGCCAGTGCCGCCATTGCCGGGGAATACACCCTGGATCGCCGCA GCATGTTGCTGGTGCAAGCCTACCGAGGGCAAGAATTGCGCTGGGAGGTCTTGAGCTTAAACGAGATGGTGCTGCACCGC GAGCCTTTGACCAGCATGTGCCACTTCGAGATCACCATCGGGGATCACTCACCTCTGGATGTGGCTGCCGACGGAGTCAT CTTGGCTACTCCCACCGGCTCGACGGCCTATGCCCTCTCGGCGGGTGGGCCGGTGATCACACCGGGGGTGCCGGTTTTGC AGCTGATTCCCATCTGCCCCCATTCCATGGCGTCGCGGGCCTTGGTCTTCCCCGATTCGGAGGAGGTATGGATTAGCCCC GTTACCCCTCAGCCACTGGTTTTGGTGGTAGATGGAAATGCCGGCTGCTACATCATGCCGGAAGACCAGATTCGGGTGGT ACGTGCCCCCTATTGGACAGATTTGATGCGCCTGCGCCGACCGGAATTTTTCCGGGTTATGCGAGAGAAGTTGGGGTGGG GACTGCCCCACGCTTCCAAGCCCACGTCGGTGGAGTTGCCTTAA
Upstream 100 bases:
>100_bases CAGCGAAGTCTGCTGGCAGAAATTGTGGAATGGATCACCTGGCCAGCAGAGGGGCCTGCAGAACTGATAGAGTTTTGGCA CCTCTGCCTTCCCATTGCCC
Downstream 100 bases:
>100_bases CTTTGCCGAGGCAGGACAAGCCATAGCTGCAAAATGGCCAATGCCCTTAACAACTCCACCCCTCTGTCGCTATGATGGTT AGGCTCGGAAGCGGATGTGG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase 1 [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTKPKAGILYNDAKPAAKRSSETLARWFQEQGWEVCVAPNWGGILGYAKPDSPICLTKVDSLAPAGFDQTMKFAVVLGGD GTVLAAARQLAPKGIPLLAVNTGHLGFLTETYLPHLEEAASAAIAGEYTLDRRSMLLVQAYRGQELRWEVLSLNEMVLHR EPLTSMCHFEITIGDHSPLDVAADGVILATPTGSTAYALSAGGPVITPGVPVLQLIPICPHSMASRALVFPDSEEVWISP VTPQPLVLVVDGNAGCYIMPEDQIRVVRAPYWTDLMRLRRPEFFRVMREKLGWGLPHASKPTSVELP
Sequences:
>Translated_307_residues MTKPKAGILYNDAKPAAKRSSETLARWFQEQGWEVCVAPNWGGILGYAKPDSPICLTKVDSLAPAGFDQTMKFAVVLGGD GTVLAAARQLAPKGIPLLAVNTGHLGFLTETYLPHLEEAASAAIAGEYTLDRRSMLLVQAYRGQELRWEVLSLNEMVLHR EPLTSMCHFEITIGDHSPLDVAADGVILATPTGSTAYALSAGGPVITPGVPVLQLIPICPHSMASRALVFPDSEEVWISP VTPQPLVLVVDGNAGCYIMPEDQIRVVRAPYWTDLMRLRRPEFFRVMREKLGWGLPHASKPTSVELP >Mature_306_residues TKPKAGILYNDAKPAAKRSSETLARWFQEQGWEVCVAPNWGGILGYAKPDSPICLTKVDSLAPAGFDQTMKFAVVLGGDG TVLAAARQLAPKGIPLLAVNTGHLGFLTETYLPHLEEAASAAIAGEYTLDRRSMLLVQAYRGQELRWEVLSLNEMVLHRE PLTSMCHFEITIGDHSPLDVAADGVILATPTGSTAYALSAGGPVITPGVPVLQLIPICPHSMASRALVFPDSEEVWISPV TPQPLVLVVDGNAGCYIMPEDQIRVVRAPYWTDLMRLRRPEFFRVMREKLGWGLPHASKPTSVELP
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=257, Percent_Identity=29.9610894941634, Blast_Score=89, Evalue=6e-18, Organism=Escherichia coli, GI1788968, Length=288, Percent_Identity=31.5972222222222, Blast_Score=149, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320794, Length=251, Percent_Identity=30.2788844621514, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6322509, Length=251, Percent_Identity=32.6693227091633, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325068, Length=181, Percent_Identity=34.2541436464088, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI28573830, Length=221, Percent_Identity=32.1266968325792, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28573828, Length=221, Percent_Identity=32.1266968325792, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI161077047, Length=221, Percent_Identity=32.1266968325792, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28573832, Length=221, Percent_Identity=32.1266968325792, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28573826, Length=221, Percent_Identity=32.1266968325792, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI20129957, Length=246, Percent_Identity=30.0813008130081, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI281363321, Length=246, Percent_Identity=30.0813008130081, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653422, Length=246, Percent_Identity=30.0813008130081, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI281363323, Length=246, Percent_Identity=30.0813008130081, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653424, Length=246, Percent_Identity=30.0813008130081, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 33375; Mature: 33244
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPKAGILYNDAKPAAKRSSETLARWFQEQGWEVCVAPNWGGILGYAKPDSPICLTKVD CCCCCCCEEECCCCCHHHCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEECC SLAPAGFDQTMKFAVVLGGDGTVLAAARQLAPKGIPLLAVNTGHLGFLTETYLPHLEEAA CCCCCCCCCCEEEEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHH SAAIAGEYTLDRRSMLLVQAYRGQELRWEVLSLNEMVLHREPLTSMCHFEITIGDHSPLD HHHCCCCEEECCHHEEEEEECCCCCEEEEEEEHHHHHHCCCCCCCEEEEEEEECCCCCCC VAADGVILATPTGSTAYALSAGGPVITPGVPVLQLIPICPHSMASRALVFPDSEEVWISP EECCCEEEECCCCCCEEEEECCCCEECCCCCHHHEECCCCHHHHCCEEECCCCCCEEEEC VTPQPLVLVVDGNAGCYIMPEDQIRVVRAPYWTDLMRLRRPEFFRVMREKLGWGLPHASK CCCCCEEEEEECCCCEEEECCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC PTSVELP CCEECCC >Mature Secondary Structure TKPKAGILYNDAKPAAKRSSETLARWFQEQGWEVCVAPNWGGILGYAKPDSPICLTKVD CCCCCCEEECCCCCHHHCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEECC SLAPAGFDQTMKFAVVLGGDGTVLAAARQLAPKGIPLLAVNTGHLGFLTETYLPHLEEAA CCCCCCCCCCEEEEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHH SAAIAGEYTLDRRSMLLVQAYRGQELRWEVLSLNEMVLHREPLTSMCHFEITIGDHSPLD HHHCCCCEEECCHHEEEEEECCCCCEEEEEEEHHHHHHCCCCCCCEEEEEEEECCCCCCC VAADGVILATPTGSTAYALSAGGPVITPGVPVLQLIPICPHSMASRALVFPDSEEVWISP EECCCEEEECCCCCCEEEEECCCCEECCCCCHHHEECCCCHHHHCCEEECCCCCCEEEEC VTPQPLVLVVDGNAGCYIMPEDQIRVVRAPYWTDLMRLRRPEFFRVMREKLGWGLPHASK CCCCCEEEEEECCCCEEEECCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC PTSVELP CCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA