| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609748
Identifier: 86609748
GI number: 86609748
Start: 2418300
End: 2418983
Strand: Direct
Name: 86609748
Synonym: CYB_2307
Alternate gene names: NA
Gene position: 2418300-2418983 (Clockwise)
Preceding gene: 86609744
Following gene: 86609749
Centisome position: 79.37
GC content: 59.8
Gene sequence:
>684_bases GTGCCCCCGCCGCCTCAGCCTTCTGTGCAGGATGACTTTCCTCCCTTACCCCCCCCACCTCCCCGTTCTCCGGCTTTGAG GGTGGTGGAAACGGCTTTTTTGGCCAGTACCGCGGCCTTGATCTGGATCCTGAGCTACACGCCGCTGGCCCCCTTTATAC GTCTGTTTTTCCCCATTCCGGTGGCGCTGGCGGTGATGCGCTGGGATCCCCGCACAGGGGCAATGGCCCTGGTGGTCTCC GGCCTGTTGCTGACGGTGCTGATAGGGCCCACGCGCAGCATTCTCTATGTCATTCCCTATGGTCTGCTGGGCTATTGGTG TGCCCGCCTGTGGCAGCAGCGTCTTTCCTGGTACGTCTCGGTGGTGAGCGGGGCTGTGCTCAGCGCCCTGGGCTTGATCT TTCAGTTGGTGCTTTCCTCCCTACTGGTGGGGGAAAACCTCTGGATCTACGTAACCATTCAACTTACCGGCCTAACCAAC TGGCTCCTGGATGTGTCCCTCAGCCGATGGGGCGTCTACTGGGTGGCAGAACCCTGGATGGTTCAGGTGGTGGTGGTGGG ATTTATTGCCTTCAATTCCCTCATCTACGTATTCACGGTGCATTTGGTGGCCGCCCTGGTGATGGAGCACTTTCGTTGCC CGCTGCCACCCCCGCCGAAGTGGGTACAGTTTTTGCTGGATTAG
Upstream 100 bases:
>100_bases TGGGGGTCGGTTTGCAGTCCAAATCCACACCTCCAAGCAACAATTGCGCCCAGCCCGGCAACCGGTGGCCTAAGCTGGGA AAAGTTGTGCTTTTCTGGAT
Downstream 100 bases:
>100_bases CAGCCCCTGTGAGTTGTACAAGAGCAGAGCAAGCTGCTCTACAAATGAGTTCTTGACAAATCTTGACAAATGAGTTCTTG GCAAAAGTCCCACCCTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPPPPQPSVQDDFPPLPPPPPRSPALRVVETAFLASTAALIWILSYTPLAPFIRLFFPIPVALAVMRWDPRTGAMALVVS GLLLTVLIGPTRSILYVIPYGLLGYWCARLWQQRLSWYVSVVSGAVLSALGLIFQLVLSSLLVGENLWIYVTIQLTGLTN WLLDVSLSRWGVYWVAEPWMVQVVVVGFIAFNSLIYVFTVHLVAALVMEHFRCPLPPPPKWVQFLLD
Sequences:
>Translated_227_residues MPPPPQPSVQDDFPPLPPPPPRSPALRVVETAFLASTAALIWILSYTPLAPFIRLFFPIPVALAVMRWDPRTGAMALVVS GLLLTVLIGPTRSILYVIPYGLLGYWCARLWQQRLSWYVSVVSGAVLSALGLIFQLVLSSLLVGENLWIYVTIQLTGLTN WLLDVSLSRWGVYWVAEPWMVQVVVVGFIAFNSLIYVFTVHLVAALVMEHFRCPLPPPPKWVQFLLD >Mature_226_residues PPPPQPSVQDDFPPLPPPPPRSPALRVVETAFLASTAALIWILSYTPLAPFIRLFFPIPVALAVMRWDPRTGAMALVVSG LLLTVLIGPTRSILYVIPYGLLGYWCARLWQQRLSWYVSVVSGAVLSALGLIFQLVLSSLLVGENLWIYVTIQLTGLTNW LLDVSLSRWGVYWVAEPWMVQVVVVGFIAFNSLIYVFTVHLVAALVMEHFRCPLPPPPKWVQFLLD
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25375; Mature: 25243
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPPQPSVQDDFPPLPPPPPRSPALRVVETAFLASTAALIWILSYTPLAPFIRLFFPIP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VALAVMRWDPRTGAMALVVSGLLLTVLIGPTRSILYVIPYGLLGYWCARLWQQRLSWYVS HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSGAVLSALGLIFQLVLSSLLVGENLWIYVTIQLTGLTNWLLDVSLSRWGVYWVAEPWM HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCEEEECCHHH VQVVVVGFIAFNSLIYVFTVHLVAALVMEHFRCPLPPPPKWVQFLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure PPPPQPSVQDDFPPLPPPPPRSPALRVVETAFLASTAALIWILSYTPLAPFIRLFFPIP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VALAVMRWDPRTGAMALVVSGLLLTVLIGPTRSILYVIPYGLLGYWCARLWQQRLSWYVS HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSGAVLSALGLIFQLVLSSLLVGENLWIYVTIQLTGLTNWLLDVSLSRWGVYWVAEPWM HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCEEEECCHHH VQVVVVGFIAFNSLIYVFTVHLVAALVMEHFRCPLPPPPKWVQFLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA