Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609712

Identifier: 86609712

GI number: 86609712

Start: 2376131

End: 2377504

Strand: Direct

Name: 86609712

Synonym: CYB_2271

Alternate gene names: NA

Gene position: 2376131-2377504 (Clockwise)

Preceding gene: 86609711

Following gene: 86609714

Centisome position: 77.99

GC content: 60.33

Gene sequence:

>1374_bases
ATGCGTCGTCTTCTCCAGATTTTCATGCTGGGATTGGCCTCTCTTTGGGCGGCGAGCTTTCTGGCTTTCCCCGCTGCCCC
AGAGGGATCCCAGCCATTGCCCCCTCGAGCGGGTGGCGAAACAACCCTTTGGAACCGCACCTCAACAGCCTACGAGCAGC
CGGCTCCCAACTTGGATCCCCGCTGGGCCAGGTTGCATGCCCTGGGGGACATCGCCTTTGAGGCTCGCTTCGTCACCGCT
CCGGCGCCTGTTAACCCCGGCCTTGGGCCTCTGTTCAACAACAACTCCTGCGCCGGTTGTCATGTTAAAAACGGCCGAGG
TTTTCCTGACAAGGGGCAGCGGGTCGTCAGAGTCAGCCAGGTTGGATCCCTGGATAGAAGCGGGGATCCCCAGCCTTTTG
GATGGGAGGCCATTGCTCCTCATAGCAACACTCCCCCTGTGGCCGGCATCGGCACGCAGGTTCAAGAAAAGGCCGTTCGG
GGCTATCGGCCAGAGGCCAAGGTGGAGTTGCACTGGGTAGAGCAGACCAGAGAGTACGCCGACGGAACTCCCTACAGGCT
GCGTTCTCCTGTTGTAAAGCTGTTAACTCTGGAGGGATCGCCCATCGATCCTGTCCTCATCTCCCTGCGGATCCCCCAGC
CGGTGTTTGGAGCGGGCCTACTGGAGGCCGTTCCCGCTTCTAGGATCCTGGCAGCAGCCGATCCTGACGACGCCGATGGG
GATGGCATCTCTGGCCGCCCCAACTTGGTTTGGGATCAAGAGCAGCAGCGTCTGGTGCTGGGACGGTTTGGTTGGAAAGC
CAATACCCCCAACCTCAGGCAACAAACTGCGGCCGCCTACGCCAACGACATGGGTGTCACGAATCCTCTTTTTCCGGCCG
CGGATGGCAGCCAAGATATCGACGAGGCCACTCTCCAAGCGACAACCGTTTACGTGCAAACCCTGGCCGTGCCTGGCCGC
GCCCTTTGGCAGGATCCCCAAGTTCAGCGAGGGGAAAAGCTCTTCGTCCAAGCCCAATGCGCCAAGTGTCACCGACCAGA
GCTACAAACCGGCATTCATGAGATCCCTGCCCTGGCCAACCAAGTCATCCACCCCTACACCGATTTGCTGTTGCATGACA
TGGGCGAAGGACTAGCAGATGGCCGCGCTGACTTCGAGGCCACGGGCCGAGAATGGCGCACCCCCCCTTTGTGGGGCATC
GGCTTGTCGCAGACAGTTCTGCCCTCCTCCGGCTATTTGCACGATGGCCGCGCCCGCAGCCTCGAGGAGGCCATTCTCTG
GCATGGGGGAGAAGCTGAACGCTCCCGCGAGATCTTTAAAAATATGGCTGCTGAAGACAGAGAAGCCCTGCTCTATTTTC
TTCGATCCCTCTAG

Upstream 100 bases:

>100_bases
AATTGAAGACGCTTTCGACAGCTTTGCTCAGGAAGTTGTGCCGCTCCTGCAGTAGTAAGAAAGTCCCAAAAGAGCTGAGT
TGCCGATATTTTGATAGCCG

Downstream 100 bases:

>100_bases
AGCTCTGCCCATTTCCGCAGCAGGTTCGCGTAAACTTTGGAGATCAAATCAAAGTGGCGTGTCTTGCCCGATTCCTGAAA
CATCTGCTGCCGCACAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRRLLQIFMLGLASLWAASFLAFPAAPEGSQPLPPRAGGETTLWNRTSTAYEQPAPNLDPRWARLHALGDIAFEARFVTA
PAPVNPGLGPLFNNNSCAGCHVKNGRGFPDKGQRVVRVSQVGSLDRSGDPQPFGWEAIAPHSNTPPVAGIGTQVQEKAVR
GYRPEAKVELHWVEQTREYADGTPYRLRSPVVKLLTLEGSPIDPVLISLRIPQPVFGAGLLEAVPASRILAAADPDDADG
DGISGRPNLVWDQEQQRLVLGRFGWKANTPNLRQQTAAAYANDMGVTNPLFPAADGSQDIDEATLQATTVYVQTLAVPGR
ALWQDPQVQRGEKLFVQAQCAKCHRPELQTGIHEIPALANQVIHPYTDLLLHDMGEGLADGRADFEATGREWRTPPLWGI
GLSQTVLPSSGYLHDGRARSLEEAILWHGGEAERSREIFKNMAAEDREALLYFLRSL

Sequences:

>Translated_457_residues
MRRLLQIFMLGLASLWAASFLAFPAAPEGSQPLPPRAGGETTLWNRTSTAYEQPAPNLDPRWARLHALGDIAFEARFVTA
PAPVNPGLGPLFNNNSCAGCHVKNGRGFPDKGQRVVRVSQVGSLDRSGDPQPFGWEAIAPHSNTPPVAGIGTQVQEKAVR
GYRPEAKVELHWVEQTREYADGTPYRLRSPVVKLLTLEGSPIDPVLISLRIPQPVFGAGLLEAVPASRILAAADPDDADG
DGISGRPNLVWDQEQQRLVLGRFGWKANTPNLRQQTAAAYANDMGVTNPLFPAADGSQDIDEATLQATTVYVQTLAVPGR
ALWQDPQVQRGEKLFVQAQCAKCHRPELQTGIHEIPALANQVIHPYTDLLLHDMGEGLADGRADFEATGREWRTPPLWGI
GLSQTVLPSSGYLHDGRARSLEEAILWHGGEAERSREIFKNMAAEDREALLYFLRSL
>Mature_457_residues
MRRLLQIFMLGLASLWAASFLAFPAAPEGSQPLPPRAGGETTLWNRTSTAYEQPAPNLDPRWARLHALGDIAFEARFVTA
PAPVNPGLGPLFNNNSCAGCHVKNGRGFPDKGQRVVRVSQVGSLDRSGDPQPFGWEAIAPHSNTPPVAGIGTQVQEKAVR
GYRPEAKVELHWVEQTREYADGTPYRLRSPVVKLLTLEGSPIDPVLISLRIPQPVFGAGLLEAVPASRILAAADPDDADG
DGISGRPNLVWDQEQQRLVLGRFGWKANTPNLRQQTAAAYANDMGVTNPLFPAADGSQDIDEATLQATTVYVQTLAVPGR
ALWQDPQVQRGEKLFVQAQCAKCHRPELQTGIHEIPALANQVIHPYTDLLLHDMGEGLADGRADFEATGREWRTPPLWGI
GLSQTVLPSSGYLHDGRARSLEEAILWHGGEAERSREIFKNMAAEDREALLYFLRSL

Specific function: Unknown

COG id: COG3488

COG function: function code C; Predicted thiol oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49917; Mature: 49917

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLQIFMLGLASLWAASFLAFPAAPEGSQPLPPRAGGETTLWNRTSTAYEQPAPNLDP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
RWARLHALGDIAFEARFVTAPAPVNPGLGPLFNNNSCAGCHVKNGRGFPDKGQRVVRVSQ
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHH
VGSLDRSGDPQPFGWEAIAPHSNTPPVAGIGTQVQEKAVRGYRPEAKVELHWVEQTREYA
HCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHC
DGTPYRLRSPVVKLLTLEGSPIDPVLISLRIPQPVFGAGLLEAVPASRILAAADPDDADG
CCCCHHHHCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCHHHEEEECCCCCCCC
DGISGRPNLVWDQEQQRLVLGRFGWKANTPNLRQQTAAAYANDMGVTNPLFPAADGSQDI
CCCCCCCCCEECCCHHEEEEHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
DEATLQATTVYVQTLAVPGRALWQDPQVQRGEKLFVQAQCAKCHRPELQTGIHEIPALAN
HHHHHHHHHEEEHHHHCCCHHHCCCCCHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHH
QVIHPYTDLLLHDMGEGLADGRADFEATGREWRTPPLWGIGLSQTVLPSSGYLHDGRARS
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHH
LEEAILWHGGEAERSREIFKNMAAEDREALLYFLRSL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRRLLQIFMLGLASLWAASFLAFPAAPEGSQPLPPRAGGETTLWNRTSTAYEQPAPNLDP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
RWARLHALGDIAFEARFVTAPAPVNPGLGPLFNNNSCAGCHVKNGRGFPDKGQRVVRVSQ
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHH
VGSLDRSGDPQPFGWEAIAPHSNTPPVAGIGTQVQEKAVRGYRPEAKVELHWVEQTREYA
HCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHC
DGTPYRLRSPVVKLLTLEGSPIDPVLISLRIPQPVFGAGLLEAVPASRILAAADPDDADG
CCCCHHHHCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCHHHEEEECCCCCCCC
DGISGRPNLVWDQEQQRLVLGRFGWKANTPNLRQQTAAAYANDMGVTNPLFPAADGSQDI
CCCCCCCCCEECCCHHEEEEHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
DEATLQATTVYVQTLAVPGRALWQDPQVQRGEKLFVQAQCAKCHRPELQTGIHEIPALAN
HHHHHHHHHEEEHHHHCCCHHHCCCCCHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHH
QVIHPYTDLLLHDMGEGLADGRADFEATGREWRTPPLWGIGLSQTVLPSSGYLHDGRARS
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHH
LEEAILWHGGEAERSREIFKNMAAEDREALLYFLRSL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA