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The map label for this gene is rimP [H]

Identifier: 86609688

GI number: 86609688

Start: 2352338

End: 2352808

Strand: Reverse

Name: rimP [H]

Synonym: CYB_2246

Alternate gene names: 86609688

Gene position: 2352808-2352338 (Counterclockwise)

Preceding gene: 86609691

Following gene: 86609687

Centisome position: 77.23

GC content: 57.96

Gene sequence:

>471_bases
ATGGTTCACCCTCTTATTCCACAGTTGGAGAGCTTGGCCCGTCCCTTGGCCGCTCAACTGGGATACCAGTTGGTGCAGAT
GGTTTTCCACACCAACCAGCATCCGCCAGTTCTGCGGGTGGATATTCGTCCACTGGATCCCGACCGAGAAACCAGCCATG
CCGATTGCGAAGCCATGAGCCAAGCCTTGGAAGTCGAGCTGGATCGGGTGGATCTGATCCCAGGCCAGTATGTGTTGGAG
GTGTCCAGCCCTGGCATCAGCAACCTTCTCACCAGCGATCGCGACTTTGTGGTTTTCAAAGGGTTTGCGGTGGAGGTGAC
CTTGGATCCACCCTACAAGGGCAAAGCCGTTTGGTCAGGACACCTGCTGGGTCGGGATGAGGAGAGGGTTGCCTTATCCC
TCAAGGGGCGGCGAGTTCAGTTGCCCCGCGCTTCGGTGCAGCGGGTTGCCCTCTCATCGGAAACTGACTAG

Upstream 100 bases:

>100_bases
CACTTCTTTGCTTTTTGAGGGGGCTTACTGTCCCCTTTGCCGGCTCCGGCTCAAAGGGGTTTGGATCTGGCGGCAACACC
CGGTTGGTGACAAGTTGGTT

Downstream 100 bases:

>100_bases
GAGACCGGAGATAGAGAGAGCGTTTGACCGCAGGTGGTGCGGCCCTCCCTTCGCATCAGAGATGCGGGTTCAGTTCCCGC
TGTGGAGCAATAGCAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MVHPLIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALEVELDRVDLIPGQYVLE
VSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSGHLLGRDEERVALSLKGRRVQLPRASVQRVALSSETD

Sequences:

>Translated_156_residues
MVHPLIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALEVELDRVDLIPGQYVLE
VSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSGHLLGRDEERVALSLKGRRVQLPRASVQRVALSSETD
>Mature_156_residues
MVHPLIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALEVELDRVDLIPGQYVLE
VSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSGHLLGRDEERVALSLKGRRVQLPRASVQRVALSSETD

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17358; Mature: 17358

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPLIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHH
QALEVELDRVDLIPGQYVLEVSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSG
HHHHEECCEEEECCCCEEEEECCCCHHHHHCCCCCEEEEECEEEEEEECCCCCCCEEEEC
HLLGRDEERVALSLKGRRVQLPRASVQRVALSSETD
CCCCCCCCEEEEEECCCEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVHPLIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHH
QALEVELDRVDLIPGQYVLEVSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSG
HHHHEECCEEEECCCCEEEEECCCCHHHHHCCCCCEEEEECEEEEEEECCCCCCCEEEEC
HLLGRDEERVALSLKGRRVQLPRASVQRVALSSETD
CCCCCCCCEEEEEECCCEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA