| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609670
Identifier: 86609670
GI number: 86609670
Start: 2329952
End: 2331613
Strand: Direct
Name: 86609670
Synonym: CYB_2226
Alternate gene names: NA
Gene position: 2329952-2331613 (Clockwise)
Preceding gene: 86609668
Following gene: 86609671
Centisome position: 76.48
GC content: 60.17
Gene sequence:
>1662_bases ATGAAAGGGGGCAAGGTGGCAGACTCTCAGAGCACGCCCAAGCAAGGGGAGACCTCTTCCGGTCGGGATCGGGCCTCGCG GCCGAAAAAAAGTAAGCCAAGCCCTTCTGCCCAGTCCGGGGATTTGGGAACCTCAGAAGCAAGAGCGCGGCCAAAACAGG CCGATAGCACTCCGCGCCGTGCGGAGCAGCAGGAGATTTTACAAGATCACCCTTCTGGCTTGAACCCGCCCAAAAATCTC TCTATACTGCAGGGAACTTTATCATTTGCTCCCGCTTCTTCATCTCTCCTTCAATCTATGCGTGCTCCTTCCTCAGGCGA CTTGGATCCCATCCTTTCAGAGACTCATGCGGGCTGTTCAGCATCCGAGCCGGATCCCAGCACGGAGCGCCATTTGGCCC TGAGGCAGCAACAGCCCTTGGAGAGCCGTCTGCTCAAAGCCGAAGCCGAGCTCCAAGAGCGGCGAGTTCTTCAGGAACAA CTGCGGGCTTTGCACCAGAAGGTGGCCGAACAAGAGAAGGCGCTGCAGGAGCGGGAGCATCTCTTGCAACAGTTGCAGCA GACTTTGGCGGCTCAGAAAGTCCAGATCTCGGATCAGGAAGCTCAGCTTGCTGCTCGGCAACGCTTAAATGAACGGCAGC GGCAGGATATCGAGGCCCTGCAGGAGCAGATTGAGCAGCTACGCTTGGCCCACGCTCAGGAGCGCCGTCAATGGGAACAG CGCCAGCAGGAGCTGCAGGCCTCTCTGCTGGAAGCCCAGGATGTGGCGGAAAAGCGGGTGGAAATGCTGCAACGCTTTAA GGCAGAGCTTTCTCTGGCCCGCACTCAAATTGCCGAAACTCAGGCGGAGCTGAGCAGCCTGCGGGCTTTGTACAGCGACC AACAGGCAGCCTGGCAGGAGCAACGGGAACACCTCGAGGCCCGTTTGGCGGGCTATGCCGAGACGGAAGCCGAGGCCGAG CAGCGCTGGCGGGAACAACGGCAAGAGCTAGAAGCAGCCCTGGCCGAAGCCCAAGCTCAATTGGCGGCTTTGCAAGCTCA GCAGGAGCATCTGCGCCAGGGATCCCTGGCGCAGCAACAGCTTCAACAGCAGTGGCAGGCCCAGGCCGAAGCGCTGCAAG TGGCCCTCTCTCAAGCCCAGGCGGAAGTTACCCGTTGGCAGCAAGAGCACCGCCATCTGCAGGAACAGTACGCCCAAGCC CAGCAGCATCTCTCCGCCATGGAGCGGCAGTTGCAGGCTGCCTTGGAGCAGTTGGCCGCCCAACCCGACTGGCAGCCACA GTTGCGCTCTGCGCAGGCAACCATTCTCCATCTGCAAGAAGAAATTGCAACCTTGTCCACGCAACTGGAGAAGCAAGCAG AGCAGATCAAAGCCCTGCAAGGGGAGCGTGCTGCCCTGTGGGAAGAAAACCGCTCTCTCCGAGAAAAATACGAGCAGCAG CAGATGCATGTGCTGAGCTTGAAGGCGGCTTTGGAACGCAAAGGCTTGGATGTCCCACCTCGGGCCGATACCTCCAGCGC CCTCACGCGAACAGAGTCCCTTGGCCAGGCTCTGTCTCCAACCCCTGCTGCCAAGCCTACAATTCAGCCCCTGGCCCAAC CTCTACCGTCTCGGGCAAGCAAGCGGGCGGTCGATCTGCCGAGGTTTCTGCCCCGTCCGTGA
Upstream 100 bases:
>100_bases GCAGAGACGCTTGGATTGAGACCGAGTCGATTTAGATTTAGACTCAGTTTAGAATGGTGGGGCCATCTGTCCGTGATGGC GGGGGTGGGTGTTGTGGGTG
Downstream 100 bases:
>100_bases GGGATCCCGTGTTGCAGCCTGTTCCTCCCCGCTGGCTGGAAGTGTGGGTGGATCATCCCCATTTGGGGGGTTGCTTTACC TATCGTGTGCCAGAGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKGGKVADSQSTPKQGETSSGRDRASRPKKSKPSPSAQSGDLGTSEARARPKQADSTPRRAEQQEILQDHPSGLNPPKNL SILQGTLSFAPASSSLLQSMRAPSSGDLDPILSETHAGCSASEPDPSTERHLALRQQQPLESRLLKAEAELQERRVLQEQ LRALHQKVAEQEKALQEREHLLQQLQQTLAAQKVQISDQEAQLAARQRLNERQRQDIEALQEQIEQLRLAHAQERRQWEQ RQQELQASLLEAQDVAEKRVEMLQRFKAELSLARTQIAETQAELSSLRALYSDQQAAWQEQREHLEARLAGYAETEAEAE QRWREQRQELEAALAEAQAQLAALQAQQEHLRQGSLAQQQLQQQWQAQAEALQVALSQAQAEVTRWQQEHRHLQEQYAQA QQHLSAMERQLQAALEQLAAQPDWQPQLRSAQATILHLQEEIATLSTQLEKQAEQIKALQGERAALWEENRSLREKYEQQ QMHVLSLKAALERKGLDVPPRADTSSALTRTESLGQALSPTPAAKPTIQPLAQPLPSRASKRAVDLPRFLPRP
Sequences:
>Translated_553_residues MKGGKVADSQSTPKQGETSSGRDRASRPKKSKPSPSAQSGDLGTSEARARPKQADSTPRRAEQQEILQDHPSGLNPPKNL SILQGTLSFAPASSSLLQSMRAPSSGDLDPILSETHAGCSASEPDPSTERHLALRQQQPLESRLLKAEAELQERRVLQEQ LRALHQKVAEQEKALQEREHLLQQLQQTLAAQKVQISDQEAQLAARQRLNERQRQDIEALQEQIEQLRLAHAQERRQWEQ RQQELQASLLEAQDVAEKRVEMLQRFKAELSLARTQIAETQAELSSLRALYSDQQAAWQEQREHLEARLAGYAETEAEAE QRWREQRQELEAALAEAQAQLAALQAQQEHLRQGSLAQQQLQQQWQAQAEALQVALSQAQAEVTRWQQEHRHLQEQYAQA QQHLSAMERQLQAALEQLAAQPDWQPQLRSAQATILHLQEEIATLSTQLEKQAEQIKALQGERAALWEENRSLREKYEQQ QMHVLSLKAALERKGLDVPPRADTSSALTRTESLGQALSPTPAAKPTIQPLAQPLPSRASKRAVDLPRFLPRP >Mature_553_residues MKGGKVADSQSTPKQGETSSGRDRASRPKKSKPSPSAQSGDLGTSEARARPKQADSTPRRAEQQEILQDHPSGLNPPKNL SILQGTLSFAPASSSLLQSMRAPSSGDLDPILSETHAGCSASEPDPSTERHLALRQQQPLESRLLKAEAELQERRVLQEQ LRALHQKVAEQEKALQEREHLLQQLQQTLAAQKVQISDQEAQLAARQRLNERQRQDIEALQEQIEQLRLAHAQERRQWEQ RQQELQASLLEAQDVAEKRVEMLQRFKAELSLARTQIAETQAELSSLRALYSDQQAAWQEQREHLEARLAGYAETEAEAE QRWREQRQELEAALAEAQAQLAALQAQQEHLRQGSLAQQQLQQQWQAQAEALQVALSQAQAEVTRWQQEHRHLQEQYAQA QQHLSAMERQLQAALEQLAAQPDWQPQLRSAQATILHLQEEIATLSTQLEKQAEQIKALQGERAALWEENRSLREKYEQQ QMHVLSLKAALERKGLDVPPRADTSSALTRTESLGQALSPTPAAKPTIQPLAQPLPSRASKRAVDLPRFLPRP
Specific function: Unknown
COG id: COG5022
COG function: function code Z; Myosin heavy chain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62277; Mature: 62277
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGGKVADSQSTPKQGETSSGRDRASRPKKSKPSPSAQSGDLGTSEARARPKQADSTPRR CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHH AEQQEILQDHPSGLNPPKNLSILQGTLSFAPASSSLLQSMRAPSSGDLDPILSETHAGCS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC ASEPDPSTERHLALRQQQPLESRLLKAEAELQERRVLQEQLRALHQKVAEQEKALQEREH CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQQLQQTLAAQKVQISDQEAQLAARQRLNERQRQDIEALQEQIEQLRLAHAQERRQWEQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQELQASLLEAQDVAEKRVEMLQRFKAELSLARTQIAETQAELSSLRALYSDQQAAWQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREHLEARLAGYAETEAEAEQRWREQRQELEAALAEAQAQLAALQAQQEHLRQGSLAQQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQQQWQAQAEALQVALSQAQAEVTRWQQEHRHLQEQYAQAQQHLSAMERQLQAALEQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPDWQPQLRSAQATILHLQEEIATLSTQLEKQAEQIKALQGERAALWEENRSLREKYEQQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QMHVLSLKAALERKGLDVPPRADTSSALTRTESLGQALSPTPAAKPTIQPLAQPLPSRAS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHH KRAVDLPRFLPRP HHHHCCHHCCCCC >Mature Secondary Structure MKGGKVADSQSTPKQGETSSGRDRASRPKKSKPSPSAQSGDLGTSEARARPKQADSTPRR CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHH AEQQEILQDHPSGLNPPKNLSILQGTLSFAPASSSLLQSMRAPSSGDLDPILSETHAGCS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC ASEPDPSTERHLALRQQQPLESRLLKAEAELQERRVLQEQLRALHQKVAEQEKALQEREH CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQQLQQTLAAQKVQISDQEAQLAARQRLNERQRQDIEALQEQIEQLRLAHAQERRQWEQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQELQASLLEAQDVAEKRVEMLQRFKAELSLARTQIAETQAELSSLRALYSDQQAAWQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREHLEARLAGYAETEAEAEQRWREQRQELEAALAEAQAQLAALQAQQEHLRQGSLAQQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQQQWQAQAEALQVALSQAQAEVTRWQQEHRHLQEQYAQAQQHLSAMERQLQAALEQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPDWQPQLRSAQATILHLQEEIATLSTQLEKQAEQIKALQGERAALWEENRSLREKYEQQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QMHVLSLKAALERKGLDVPPRADTSSALTRTESLGQALSPTPAAKPTIQPLAQPLPSRAS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHH KRAVDLPRFLPRP HHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA