Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609626

Identifier: 86609626

GI number: 86609626

Start: 2286473

End: 2286817

Strand: Direct

Name: 86609626

Synonym: CYB_2180

Alternate gene names: NA

Gene position: 2286473-2286817 (Clockwise)

Preceding gene: 86609619

Following gene: 86609629

Centisome position: 75.05

GC content: 62.03

Gene sequence:

>345_bases
GTGTTCAGCGTAAATGTATCAGCCATGAACTGGCAACACCTCTTCACTCGCGCTTTTTGGGCGGCGACCCTCGCCAGCTT
GTGCCTGCCGGGAGCGGTTCTGGCCCAGGCTAACCTGCGGGAACTCCCTCCAGACCTGGCAGAACAGCTAACCACAGAGC
AAATTTTGCAAGCCTGCGCCGCCAACCAAGCCGATACCCTGCCCAGCCCCTTCCCGGACGTGGTGCCGACCGACTGGGCC
TACAAGGCAGTGCTGACGCTCTACTACTGTGGGGCCTACCGGGGGGCTATCCCACCGGAGACCTTCCGGCGCTACCTGGA
GCAACAACGGGGATCCCAAACCTAG

Upstream 100 bases:

>100_bases
CTTTGCGGGATACCGCCATTCTGTTTGGACTCCGTCCCGCTAACGCGAATGGAAACAAACAGAATGCTATCGCTGCATAG
TTGAACAGTGATGTTCAGCA

Downstream 100 bases:

>100_bases
AAGGCTGGCTCTACTTCAAAGATCGGTACATCTCCTCGATGAGGTGAGCGTAGCGCTCCGCCACAGGGTTGCGCTTAATT
TTCAGCGTCTGGGTCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MFSVNVSAMNWQHLFTRAFWAATLASLCLPGAVLAQANLRELPPDLAEQLTTEQILQACAANQADTLPSPFPDVVPTDWA
YKAVLTLYYCGAYRGAIPPETFRRYLEQQRGSQT

Sequences:

>Translated_114_residues
MFSVNVSAMNWQHLFTRAFWAATLASLCLPGAVLAQANLRELPPDLAEQLTTEQILQACAANQADTLPSPFPDVVPTDWA
YKAVLTLYYCGAYRGAIPPETFRRYLEQQRGSQT
>Mature_114_residues
MFSVNVSAMNWQHLFTRAFWAATLASLCLPGAVLAQANLRELPPDLAEQLTTEQILQACAANQADTLPSPFPDVVPTDWA
YKAVLTLYYCGAYRGAIPPETFRRYLEQQRGSQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12680; Mature: 12680

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVNVSAMNWQHLFTRAFWAATLASLCLPGAVLAQANLRELPPDLAEQLTTEQILQACA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ANQADTLPSPFPDVVPTDWAYKAVLTLYYCGAYRGAIPPETFRRYLEQQRGSQT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFSVNVSAMNWQHLFTRAFWAATLASLCLPGAVLAQANLRELPPDLAEQLTTEQILQACA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ANQADTLPSPFPDVVPTDWAYKAVLTLYYCGAYRGAIPPETFRRYLEQQRGSQT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA