| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609545
Identifier: 86609545
GI number: 86609545
Start: 2192898
End: 2193341
Strand: Direct
Name: 86609545
Synonym: CYB_2098
Alternate gene names: NA
Gene position: 2192898-2193341 (Clockwise)
Preceding gene: 86609543
Following gene: 86609549
Centisome position: 71.98
GC content: 55.63
Gene sequence:
>444_bases ATGCAACTTTACGAGTACGACTTCTATGCCTGGACGCAAAAGCAAGCCGCACTGCTGAAATCGGGGCAGTGGGATCAACT GGATATCGCCAACTTGGTGGAGGAAATCGAGGCTTTGGGCAGGCAAGAACGCCGGGAATTGCTGCACCGGCTGGGGATCC TGGTAGGGCATTTGCTGAAGTGGCAATTGCAACCCCACCTGCGAGGCAAAAGTTGGCGGGCAACGATTACTGAACAACGC CGCCAGATCCAGCGATTGCTCAGAGACAGTCCCAGCCTCAAGCCCGATCTTTCGGCAGCCCTGCAAGAGGCTCACCAGGA CGGGATCCTGTTGGTGGTGAGAGAAACGCCATTGTCTGAAGCAGATCTGCCTGCCCAGTGTCCCTACACATTTGAGCAGG TGATGGATCCCGACTTTTATCCTGGCAAGGAAGATCCCCAGTGA
Upstream 100 bases:
>100_bases CATCGCCCGCTTCTCCCAGCCAACCCGCAAAACCCGCTTCCCACAAGCATTCCCGGATTTGGCCTAGTCCGGGAAATCGA TGGGCTCAGGGTAAGGAAGC
Downstream 100 bases:
>100_bases TCTGCTCAGCCCCCGGAACCAGAACCAGGGAGGGAGGGATCCCGACCCCGGTGGGTCTCCATCTGGCTGTCCACTACCCG TCGCAGCACTCCGTTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MQLYEYDFYAWTQKQAALLKSGQWDQLDIANLVEEIEALGRQERRELLHRLGILVGHLLKWQLQPHLRGKSWRATITEQR RQIQRLLRDSPSLKPDLSAALQEAHQDGILLVVRETPLSEADLPAQCPYTFEQVMDPDFYPGKEDPQ
Sequences:
>Translated_147_residues MQLYEYDFYAWTQKQAALLKSGQWDQLDIANLVEEIEALGRQERRELLHRLGILVGHLLKWQLQPHLRGKSWRATITEQR RQIQRLLRDSPSLKPDLSAALQEAHQDGILLVVRETPLSEADLPAQCPYTFEQVMDPDFYPGKEDPQ >Mature_147_residues MQLYEYDFYAWTQKQAALLKSGQWDQLDIANLVEEIEALGRQERRELLHRLGILVGHLLKWQLQPHLRGKSWRATITEQR RQIQRLLRDSPSLKPDLSAALQEAHQDGILLVVRETPLSEADLPAQCPYTFEQVMDPDFYPGKEDPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17147; Mature: 17147
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLYEYDFYAWTQKQAALLKSGQWDQLDIANLVEEIEALGRQERRELLHRLGILVGHLLK CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQLQPHLRGKSWRATITEQRRQIQRLLRDSPSLKPDLSAALQEAHQDGILLVVRETPLSE HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC ADLPAQCPYTFEQVMDPDFYPGKEDPQ CCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQLYEYDFYAWTQKQAALLKSGQWDQLDIANLVEEIEALGRQERRELLHRLGILVGHLLK CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQLQPHLRGKSWRATITEQRRQIQRLLRDSPSLKPDLSAALQEAHQDGILLVVRETPLSE HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC ADLPAQCPYTFEQVMDPDFYPGKEDPQ CCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA