Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609541

Identifier: 86609541

GI number: 86609541

Start: 2189704

End: 2190357

Strand: Reverse

Name: 86609541

Synonym: CYB_2093

Alternate gene names: NA

Gene position: 2190357-2189704 (Counterclockwise)

Preceding gene: 86609542

Following gene: 86609540

Centisome position: 71.89

GC content: 62.54

Gene sequence:

>654_bases
GTGTTGGCGATTTACCTGCATGGATTCGGCTCTGGGCCGCAGTCGGCCAAGGCAACTTTCTTTCGGCAGCGGCTGCAGCA
GGTGGGGATCCCTGTTCAGGTGCCCGATCTGAACCAGGACAATTTTGCCCAGCTCACCTTGACCCGCCAGATCCAGCAGG
TTTCCAGCCAGCTTGCCGAGATGAACTACCCCCCTGTCACCCTCATCGGCTCTAGCCTGGGGGGGCTGGTGGCTGCCTGG
GTTGCCGAACAACAACCCTGTGTGCAGCGCTTGGTGCTCTTGGCGCCGGCTTTTGGCTTTTTAGGCCATTGGCTGCCGCG
GCTGGGGGCAGAGGCGGTGGAGACTTGGCGGCGAACCGGACAACTCATGGTGTTTCACTACGGAGAAGGCCGCCCTCTCC
CTTTGGAGTACGGCTTTGTCGCCGATGCCCAGCGCTACCCGGATGGGGGGTTACGACGGCCTGTGCCCACCCTAATTGTG
CACGGGATCCAAGACGACACCATCCCCATTCAAGCCAGTCGAGACTATGTGGCCCGTCGCCCCTGGGCCCAACTGGTGGC
GGTGGAGAGCGACCACGCCCTGACCGATGTGTTGGATCCCATTTGGCAGATCACCAGCCGCTTCTGCGGGTGGGGGATGG
AGACGGGGCAGTAG

Upstream 100 bases:

>100_bases
CCGCATCACCTGGACGGTAGCGACCCTTTTCCTCTCCATCAGCGTGGTGTTGGGGGCGGGCTGGCTCTCGGCAGCCACAG
GGCCATAGGGATCCCTTTCC

Downstream 100 bases:

>100_bases
GGTTGTTAAAGGGGATCCCTGTCCCGTGCTTGCCCATTCGCGAAAGCGTCGCGTAGCGATAATGTCTATGCAATCCAAAG
TGCTGTGCCTACAACAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW
VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV
HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ

Sequences:

>Translated_217_residues
MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW
VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV
HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ
>Mature_217_residues
MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW
VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV
HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24117; Mature: 24117

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAE
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
MNYPPVTLIGSSLGGLVAAWVAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTG
CCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
QLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIVHGIQDDTIPIQASRDYVARR
CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHC
PWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ
CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAE
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
MNYPPVTLIGSSLGGLVAAWVAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTG
CCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
QLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIVHGIQDDTIPIQASRDYVARR
CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHC
PWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ
CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA