Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609537

Identifier: 86609537

GI number: 86609537

Start: 2185415

End: 2185909

Strand: Reverse

Name: 86609537

Synonym: CYB_2089

Alternate gene names: NA

Gene position: 2185909-2185415 (Counterclockwise)

Preceding gene: 86609539

Following gene: 86609532

Centisome position: 71.75

GC content: 57.98

Gene sequence:

>495_bases
ATGCAAGTGGAGTTTCGCGAGTGCGATCCGGGAAATCTGTGGATCTGGTTTGAGTTTGCCGAGCCGCCGGTCGAAGCTGA
GCTGAAGTACCTCAACGAGGTGCTGGAGTCATGGTACGTGCTGGGCAAACTGGGGGGATTTAACGCCGAGCGCCTGGTGG
CCCAAGAGGCAGAGGCGGATCTGAGCTATCTGGAGTATCCCAACGAATCGGATCCCTTGCCTTCCCTGATGCACAACATG
GGATCCCTGGAAGAGAAGGACAACTGGGCCCGCTGCTGGTTTGATCTGGGCACCGCCGATGCGATGGCGCTGGATGTGTT
GATCAACGCCCTGCGCACCCTCAGCCTGGAATACATCGGCCTCAGCCGCGTGATTATCGGCGGGCAAAATGAGGATTGGC
CAACGGCGGATCCGGAGGAGATGGATGACATGGATGACTACGATCTAAACGGCTATGTGCGGGATCACAGGGAGGAGGAA
GGAGGGCTGGAATAG

Upstream 100 bases:

>100_bases
GCGGGATACCGCCTTCCTGCTCAGAGATAGGCAGGATGCGATCGCTTCTTTCCTGAACCATGTTCAGGAGAGTTTAGCGT
GAATGTATCAGGAACTGTCC

Downstream 100 bases:

>100_bases
CGGGATCCCTGCCTACTCCAAGTAGCCCAGCTCTTGCATCTGCCGCACCAAGTCGGCATCGCTTTCCACATTCACCTTGC
GAGGAGCCGTGCTAGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQVEFRECDPGNLWIWFEFAEPPVEAELKYLNEVLESWYVLGKLGGFNAERLVAQEAEADLSYLEYPNESDPLPSLMHNM
GSLEEKDNWARCWFDLGTADAMALDVLINALRTLSLEYIGLSRVIIGGQNEDWPTADPEEMDDMDDYDLNGYVRDHREEE
GGLE

Sequences:

>Translated_164_residues
MQVEFRECDPGNLWIWFEFAEPPVEAELKYLNEVLESWYVLGKLGGFNAERLVAQEAEADLSYLEYPNESDPLPSLMHNM
GSLEEKDNWARCWFDLGTADAMALDVLINALRTLSLEYIGLSRVIIGGQNEDWPTADPEEMDDMDDYDLNGYVRDHREEE
GGLE
>Mature_164_residues
MQVEFRECDPGNLWIWFEFAEPPVEAELKYLNEVLESWYVLGKLGGFNAERLVAQEAEADLSYLEYPNESDPLPSLMHNM
GSLEEKDNWARCWFDLGTADAMALDVLINALRTLSLEYIGLSRVIIGGQNEDWPTADPEEMDDMDDYDLNGYVRDHREEE
GGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18829; Mature: 18829

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVEFRECDPGNLWIWFEFAEPPVEAELKYLNEVLESWYVLGKLGGFNAERLVAQEAEAD
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
LSYLEYPNESDPLPSLMHNMGSLEEKDNWARCWFDLGTADAMALDVLINALRTLSLEYIG
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
LSRVIIGGQNEDWPTADPEEMDDMDDYDLNGYVRDHREEEGGLE
EEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MQVEFRECDPGNLWIWFEFAEPPVEAELKYLNEVLESWYVLGKLGGFNAERLVAQEAEAD
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
LSYLEYPNESDPLPSLMHNMGSLEEKDNWARCWFDLGTADAMALDVLINALRTLSLEYIG
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
LSRVIIGGQNEDWPTADPEEMDDMDDYDLNGYVRDHREEEGGLE
EEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA