| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609522
Identifier: 86609522
GI number: 86609522
Start: 2170908
End: 2171189
Strand: Direct
Name: 86609522
Synonym: CYB_2074
Alternate gene names: NA
Gene position: 2170908-2171189 (Clockwise)
Preceding gene: 86609521
Following gene: 86609523
Centisome position: 71.25
GC content: 57.8
Gene sequence:
>282_bases ATGGCAACCAAAGTTCTGATCCCCTCTCCCCTGCGCCCCTACACCGACAACCTGGAAGCTGTCGAGATCGAGGGCAGCAA TGTTGGCGAAGTGATGGGCAACCTCATCGCCCGCTATGGCGAGCTGAAGCGCCACCTCTACACCGAGGATGGGAAGCTGC GCAATTTTGTCAATGTCTACCTCAACGACGAGGATGTGCGCACGTTGCCCCAAGGCAACAACACCCCCGTGGGAGAACAA GCCGTCATCAGCATCGTTCCCGCTATTGCTGGAGGGTTGTGA
Upstream 100 bases:
>100_bases TAGACAGCCCCAACAAGATCGACAAACGGATAGGTCAGCCCAGATCCTCTGGATCCTCAAAAGTCTCCAGTAGATACCCA AGATCTCTCCCCGAACTCCC
Downstream 100 bases:
>100_bases GCATGTTGAACCTGGATACCAGCCAAGTCAGCCTCTCCCGCGAGGAGATGGAGCGGTTTTCTCGGCATTTGATCCTGCCC GAGGTGGGCCTAGAAGGACA
Product: ThiS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQ AVISIVPAIAGGL
Sequences:
>Translated_93_residues MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQ AVISIVPAIAGGL >Mature_92_residues ATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQA VISIVPAIAGGL
Specific function: Unknown
COG id: COG1977
COG function: function code H; Molybdopterin converting factor, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfur carrier protein CysO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR016155 - InterPro: IPR003749 [H]
Pfam domain/function: PF02597 ThiS [H]
EC number: NA
Molecular weight: Translated: 10137; Mature: 10005
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVY CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE LNDEDVRTLPQGNNTPVGEQAVISIVPAIAGGL ECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVY CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE LNDEDVRTLPQGNNTPVGEQAVISIVPAIAGGL ECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]