| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pimA [H]
Identifier: 86609513
GI number: 86609513
Start: 2162301
End: 2163470
Strand: Direct
Name: pimA [H]
Synonym: CYB_2065
Alternate gene names: 86609513
Gene position: 2162301-2163470 (Clockwise)
Preceding gene: 86609512
Following gene: 86609514
Centisome position: 70.97
GC content: 59.4
Gene sequence:
>1170_bases ATGCACATCGCCTGGATAGGCAAAAAAACACCTTTCTGTGGCAACGTCACCTATAGCCGCGAGGTGACCAACGGCCTTTT GGATCGAGGGCATCAAGTGAGCTTTTTTCACTTCACCAACGAGGGCCAACCGCCCGCTCTGGATCCCGGTGGTGAAGGCT GGAGGGCGGAGCTGGATCGTCGAGACGTTTCCCTCCCCTGTCTGTACAAATCGCAGATTTACACGATCCCGGCCCCCAAC GCCAAGCGGTTGCTCACCCAGGCTCTCAAGGAATTGCAGCCGGATCTGGTGCATGCCTCCTTGACCATTTCTCCCATCGA CTTTGTGTTGCCGGAGATCTGCGCTGAGCTCAACCAGCCGCTGGTGGCTACTTTCCACCCTGCCTTCGACCGACGGCGGC GCAACATCGCCTCTCGCACCCAATACTTGGCCTACCAGCTCTACGCACCGTGTTTGGCCAACTATCACCGCACCATCGTC TTCTCGGAAACGCAGCGGGAGATCTTGGTCAAGCTGGGGGTGCGCCCCCAACAGGTGGTGGTCATTCCCAATGGGGTCGA TGTGGACAAGTATGCGCCTGGGCCCTCCACCCTCAAACAGCGGTTGGGACTGGAGCGGATCTTCGTCTATCAGGGGCGGG TTTCGCCGGAGAAAAACCTGGAGGCCCTGCTCAAGGCTTGGAAACACGCCCAAATGGGGGAGAAGTGTGGTCTGCTGATC GTGGGGGATGGGCCGCTGCTCAACACCCTCAAGCCCTTCTACACCCTTCAACATGGGATCCACTGGCTGGGCTATATTGC CGACGAGCAGCAACGCATCGAGATCTTGCGAGGAGCCGATGTGTTTATTTTGCCCTCTTTAATCGAGGGGCTCTCTTTGT CCCTGTTGGAGGCGATGGCCTGTGGGCTGGCAGCAGTGGCCACCGATGTGGGTGCTGATGGAGAGGTTTTGGCCGATGGA GCCGGGATCCCGCTGGATCCGACACGGGTGACAGCAGAGCTGCAAACGCTGCTGCCTTTGCTGCGGGATCAACGGGAGTT TACCCAACTGCTGGGGATGAAGGCCCGCCAGCGGGTGCTGGAGCGCTATACCCTCAGCCACAACCTCAGCCAGGTGGAAC AGCTCTACCGAGAGCTGTGCCAGGGATCCCGTCAGCATCGCTGGGTGTGA
Upstream 100 bases:
>100_bases GGACGGGCCAAGGCAGGAGCTAACTCTGCTACTCTTGTAGAGGCTTGAGCATCGAGACTCCCTTTGCAGCTCAGCGTTTT AGCTCCGCGGGGATCCGCCC
Downstream 100 bases:
>100_bases GGGATGAGTGTGATGAAGCTTGTGATATTTTTGCTAAGCTGTTTCGTTACGTTTCCAAGGGATTAACGCCAGTCTTCCCG ATGGATGATCACAGCCCCCA
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV
Sequences:
>Translated_389_residues MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV >Mature_389_residues MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI9755344, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 43685; Mature: 43685
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDR CEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCC RDVSLPCLYKSQIYTIPAPNAKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQP CCCCCCEEECCCEEEECCCCHHHHHHHHHHHHCHHHEEEEEEECHHHHHHHHHHHHCCCC LVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIVFSETQREILVKLGVRPQQVV EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCEEE VIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI EECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMA ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH CGLAAVATDVGADGEVLADGAGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVL HHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHH ERYTLSHNLSQVEQLYRELCQGSRQHRWV HHHHHHCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDR CEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCC RDVSLPCLYKSQIYTIPAPNAKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQP CCCCCCEEECCCEEEECCCCHHHHHHHHHHHHCHHHEEEEEEECHHHHHHHHHHHHCCCC LVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIVFSETQREILVKLGVRPQQVV EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCEEE VIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI EECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMA ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH CGLAAVATDVGADGEVLADGAGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVL HHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHH ERYTLSHNLSQVEQLYRELCQGSRQHRWV HHHHHHCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]