Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is pimA [H]

Identifier: 86609513

GI number: 86609513

Start: 2162301

End: 2163470

Strand: Direct

Name: pimA [H]

Synonym: CYB_2065

Alternate gene names: 86609513

Gene position: 2162301-2163470 (Clockwise)

Preceding gene: 86609512

Following gene: 86609514

Centisome position: 70.97

GC content: 59.4

Gene sequence:

>1170_bases
ATGCACATCGCCTGGATAGGCAAAAAAACACCTTTCTGTGGCAACGTCACCTATAGCCGCGAGGTGACCAACGGCCTTTT
GGATCGAGGGCATCAAGTGAGCTTTTTTCACTTCACCAACGAGGGCCAACCGCCCGCTCTGGATCCCGGTGGTGAAGGCT
GGAGGGCGGAGCTGGATCGTCGAGACGTTTCCCTCCCCTGTCTGTACAAATCGCAGATTTACACGATCCCGGCCCCCAAC
GCCAAGCGGTTGCTCACCCAGGCTCTCAAGGAATTGCAGCCGGATCTGGTGCATGCCTCCTTGACCATTTCTCCCATCGA
CTTTGTGTTGCCGGAGATCTGCGCTGAGCTCAACCAGCCGCTGGTGGCTACTTTCCACCCTGCCTTCGACCGACGGCGGC
GCAACATCGCCTCTCGCACCCAATACTTGGCCTACCAGCTCTACGCACCGTGTTTGGCCAACTATCACCGCACCATCGTC
TTCTCGGAAACGCAGCGGGAGATCTTGGTCAAGCTGGGGGTGCGCCCCCAACAGGTGGTGGTCATTCCCAATGGGGTCGA
TGTGGACAAGTATGCGCCTGGGCCCTCCACCCTCAAACAGCGGTTGGGACTGGAGCGGATCTTCGTCTATCAGGGGCGGG
TTTCGCCGGAGAAAAACCTGGAGGCCCTGCTCAAGGCTTGGAAACACGCCCAAATGGGGGAGAAGTGTGGTCTGCTGATC
GTGGGGGATGGGCCGCTGCTCAACACCCTCAAGCCCTTCTACACCCTTCAACATGGGATCCACTGGCTGGGCTATATTGC
CGACGAGCAGCAACGCATCGAGATCTTGCGAGGAGCCGATGTGTTTATTTTGCCCTCTTTAATCGAGGGGCTCTCTTTGT
CCCTGTTGGAGGCGATGGCCTGTGGGCTGGCAGCAGTGGCCACCGATGTGGGTGCTGATGGAGAGGTTTTGGCCGATGGA
GCCGGGATCCCGCTGGATCCGACACGGGTGACAGCAGAGCTGCAAACGCTGCTGCCTTTGCTGCGGGATCAACGGGAGTT
TACCCAACTGCTGGGGATGAAGGCCCGCCAGCGGGTGCTGGAGCGCTATACCCTCAGCCACAACCTCAGCCAGGTGGAAC
AGCTCTACCGAGAGCTGTGCCAGGGATCCCGTCAGCATCGCTGGGTGTGA

Upstream 100 bases:

>100_bases
GGACGGGCCAAGGCAGGAGCTAACTCTGCTACTCTTGTAGAGGCTTGAGCATCGAGACTCCCTTTGCAGCTCAGCGTTTT
AGCTCCGCGGGGATCCGCCC

Downstream 100 bases:

>100_bases
GGGATGAGTGTGATGAAGCTTGTGATATTTTTGCTAAGCTGTTTCGTTACGTTTCCAAGGGATTAACGCCAGTCTTCCCG
ATGGATGATCACAGCCCCCA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN
AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV
FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI
VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG
AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV

Sequences:

>Translated_389_residues
MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN
AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV
FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI
VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG
AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV
>Mature_389_residues
MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDRRDVSLPCLYKSQIYTIPAPN
AKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQPLVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIV
FSETQREILVKLGVRPQQVVVIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI
VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMACGLAAVATDVGADGEVLADG
AGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVLERYTLSHNLSQVEQLYRELCQGSRQHRWV

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI9755344, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 43685; Mature: 43685

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDR
CEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCC
RDVSLPCLYKSQIYTIPAPNAKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQP
CCCCCCEEECCCEEEECCCCHHHHHHHHHHHHCHHHEEEEEEECHHHHHHHHHHHHCCCC
LVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIVFSETQREILVKLGVRPQQVV
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCEEE
VIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI
EECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE
VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMA
ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH
CGLAAVATDVGADGEVLADGAGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVL
HHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHH
ERYTLSHNLSQVEQLYRELCQGSRQHRWV
HHHHHHCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHIAWIGKKTPFCGNVTYSREVTNGLLDRGHQVSFFHFTNEGQPPALDPGGEGWRAELDR
CEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCC
RDVSLPCLYKSQIYTIPAPNAKRLLTQALKELQPDLVHASLTISPIDFVLPEICAELNQP
CCCCCCEEECCCEEEECCCCHHHHHHHHHHHHCHHHEEEEEEECHHHHHHHHHHHHCCCC
LVATFHPAFDRRRRNIASRTQYLAYQLYAPCLANYHRTIVFSETQREILVKLGVRPQQVV
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCEEE
VIPNGVDVDKYAPGPSTLKQRLGLERIFVYQGRVSPEKNLEALLKAWKHAQMGEKCGLLI
EECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE
VGDGPLLNTLKPFYTLQHGIHWLGYIADEQQRIEILRGADVFILPSLIEGLSLSLLEAMA
ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH
CGLAAVATDVGADGEVLADGAGIPLDPTRVTAELQTLLPLLRDQREFTQLLGMKARQRVL
HHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHH
ERYTLSHNLSQVEQLYRELCQGSRQHRWV
HHHHHHCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]