Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609501

Identifier: 86609501

GI number: 86609501

Start: 2153282

End: 2153917

Strand: Reverse

Name: 86609501

Synonym: CYB_2053

Alternate gene names: NA

Gene position: 2153917-2153282 (Counterclockwise)

Preceding gene: 86609502

Following gene: 86609500

Centisome position: 70.7

GC content: 50.94

Gene sequence:

>636_bases
ATGAACGGCCTCAGGATACTGCTTATGTTGATGCTCTCTTCTGTGTTGGTGTTGCTGTGTGGGTGCAGTGGCGGGGGAGG
TTCTACCCCCAGTGCAGAAGAAGAGCCCAATCCTGATCCCACTACTGGATTTGTGCCAGAAAATCCGGGTGAGGATCCCT
CTCCAGATATGATCCCGGTCGATGAACTGGATAGATTGTTTCCGAATTTGCCACCGGATCCAGGGGAGGCGGGCAAGCAA
ACTTTGGAGGGGATTGATGCCGATGGAGATGGCGTGCGTGATGATGTGCAGCGCTGGATTTACCGCCGGTATCCCAATGA
TGAGCTGAAGCGGAAGGCCATGCTGCGATACGCCAAAGCTTTACAGGCAAGCATCGTGAATGTTGACAGGGATAGTCGAG
ACCAGGTGCGTGCAAGAGTGCTTGATGGTTTCCGAGCAGAGCGATGTGCAAGATTGGCATTCGGCGGAGTTGATCAATTT
GATCTCATTGATGAGGTTGCTGAGGCAGTAAGGGAAGTGCAATTTCAAATGCTTAACACTCAAGAAAGAGTCATTGCAGA
TTTAACAGTTGATGCCAAGTTCTCTGGACAAGTCGTTGGCGCAGAAGAATGGACATGTACTGACCCAATTCGCTAG

Upstream 100 bases:

>100_bases
CCCTGCCCTAATTTTGTGTTGCTTGTAGCTCCAATAGAAGGATTGCCGGATCCCTGTGGGGGTCACTTGTGCCACTTGAA
CTGCTAGAACCAAGGCGATT

Downstream 100 bases:

>100_bases
ATTAGTGAGGATAAATGGATGTTCGGTCGAAATACTGTTCGTCTTGTTGTTTTATTGTGCTGTTGCCTGTCTGTACTGAT
TCTCAAGTCTTGCTCATTAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNGLRILLMLMLSSVLVLLCGCSGGGGSTPSAEEEPNPDPTTGFVPENPGEDPSPDMIPVDELDRLFPNLPPDPGEAGKQ
TLEGIDADGDGVRDDVQRWIYRRYPNDELKRKAMLRYAKALQASIVNVDRDSRDQVRARVLDGFRAERCARLAFGGVDQF
DLIDEVAEAVREVQFQMLNTQERVIADLTVDAKFSGQVVGAEEWTCTDPIR

Sequences:

>Translated_211_residues
MNGLRILLMLMLSSVLVLLCGCSGGGGSTPSAEEEPNPDPTTGFVPENPGEDPSPDMIPVDELDRLFPNLPPDPGEAGKQ
TLEGIDADGDGVRDDVQRWIYRRYPNDELKRKAMLRYAKALQASIVNVDRDSRDQVRARVLDGFRAERCARLAFGGVDQF
DLIDEVAEAVREVQFQMLNTQERVIADLTVDAKFSGQVVGAEEWTCTDPIR
>Mature_211_residues
MNGLRILLMLMLSSVLVLLCGCSGGGGSTPSAEEEPNPDPTTGFVPENPGEDPSPDMIPVDELDRLFPNLPPDPGEAGKQ
TLEGIDADGDGVRDDVQRWIYRRYPNDELKRKAMLRYAKALQASIVNVDRDSRDQVRARVLDGFRAERCARLAFGGVDQF
DLIDEVAEAVREVQFQMLNTQERVIADLTVDAKFSGQVVGAEEWTCTDPIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23278; Mature: 23278

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLRILLMLMLSSVLVLLCGCSGGGGSTPSAEEEPNPDPTTGFVPENPGEDPSPDMIPV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DELDRLFPNLPPDPGEAGKQTLEGIDADGDGVRDDVQRWIYRRYPNDELKRKAMLRYAKA
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQASIVNVDRDSRDQVRARVLDGFRAERCARLAFGGVDQFDLIDEVAEAVREVQFQMLNT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCH
QERVIADLTVDAKFSGQVVGAEEWTCTDPIR
HHHHHHHHEECCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MNGLRILLMLMLSSVLVLLCGCSGGGGSTPSAEEEPNPDPTTGFVPENPGEDPSPDMIPV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DELDRLFPNLPPDPGEAGKQTLEGIDADGDGVRDDVQRWIYRRYPNDELKRKAMLRYAKA
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQASIVNVDRDSRDQVRARVLDGFRAERCARLAFGGVDQFDLIDEVAEAVREVQFQMLNT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCH
QERVIADLTVDAKFSGQVVGAEEWTCTDPIR
HHHHHHHHEECCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA