Click here to switch to the map view.

The map label for this gene is cphB [H]

Identifier: 86609491

GI number: 86609491

Start: 2143770

End: 2144576

Strand: Direct

Name: cphB [H]

Synonym: CYB_2043

Alternate gene names: 86609491

Gene position: 2143770-2144576 (Clockwise)

Preceding gene: 86609489

Following gene: 86609492

Centisome position: 70.36

GC content: 60.47

Gene sequence:

>807_bases
GTGAAGGATCCCATCACCGCCCGTTCCGACATCATCGCCGTCGGGGGAGCAGAGGATAAGGAAAATGAGCGCCACATCCT
TTGGGAGTTCTTCCGCCGAGCGGGGGGAAAGTCTGCCCACATCACCATCGTGCCCGCGGCTTCTGGGATCCCGGCGGTGC
TGGGGGAGATCTACGCCAACATTTTTCAGCAGATGGGGGCAGCCAGCCTCCAAGTTCTGGATATCCGCAGCCCGATGGAG
GCGAGGGATCCCGATAACGTTGAGAAAATCCGCTTCTCCACCGGCATCTACTTTACGGGTGGGGATCAGGAGCGGCTGGC
GGAGGTGCTGGCCCACAGCGAGCTGATGGAGGCCATTCGACAGCAGTGGCAGCGGGGGCAGACGGTAATTGCCGGAACCA
GCGCCGGAGCTTCTGCGTTGGGGCAGCAGATGATCTCCCGCGGCTACAGCGGAGAACCGCCCACGCCGGCAATTGTAACG
GTGAAGACAGGCCTGGGCCTTTTGCCTCGCGTCATCATCGATCAACATTTCCATCAGCGCAATCGCCTGGTGCGGCTGGT
CACGGCGGTGGCCCACTATCCCCAATGTTTGGGTATCGGCATTGATGAGAATACGGCGGTGGTGATCCAGGCCGACGATG
TGATGGAGGTGATCGGCTTGGGGACGGTGACGATTGTGGACGGGACGCAACTGTACTCGACCGTTCAGGAGGCGGCAGCG
GATGAGTATTTTCGGCTGCACAATGCCCGCATTCACTTTTTGCCGCCGGGATCCCGATTCGATCTCAACACCTTGTCTCC
GCTGTGA

Upstream 100 bases:

>100_bases
GCCCCATTTGCCTGATGTCTCTGCTGCCCACCGTGAGCTGGAGTGGAACGGAGTTCCTTCCACGCCGACAAACGACGCCC
AACCCCTGAGCCGCTCTACC

Downstream 100 bases:

>100_bases
CCGGTGAAAACTTTGTCCTGCCGAGGCGGCTGGACTGGCGCAACCTCAACACCCTCTGGGGATCCCTATTGGCCGAAACC
TTGAGTCGGCTGGGTTGCCG

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKDPITARSDIIAVGGAEDKENERHILWEFFRRAGGKSAHITIVPAASGIPAVLGEIYANIFQQMGAASLQVLDIRSPME
ARDPDNVEKIRFSTGIYFTGGDQERLAEVLAHSELMEAIRQQWQRGQTVIAGTSAGASALGQQMISRGYSGEPPTPAIVT
VKTGLGLLPRVIIDQHFHQRNRLVRLVTAVAHYPQCLGIGIDENTAVVIQADDVMEVIGLGTVTIVDGTQLYSTVQEAAA
DEYFRLHNARIHFLPPGSRFDLNTLSPL

Sequences:

>Translated_268_residues
MKDPITARSDIIAVGGAEDKENERHILWEFFRRAGGKSAHITIVPAASGIPAVLGEIYANIFQQMGAASLQVLDIRSPME
ARDPDNVEKIRFSTGIYFTGGDQERLAEVLAHSELMEAIRQQWQRGQTVIAGTSAGASALGQQMISRGYSGEPPTPAIVT
VKTGLGLLPRVIIDQHFHQRNRLVRLVTAVAHYPQCLGIGIDENTAVVIQADDVMEVIGLGTVTIVDGTQLYSTVQEAAA
DEYFRLHNARIHFLPPGSRFDLNTLSPL
>Mature_268_residues
MKDPITARSDIIAVGGAEDKENERHILWEFFRRAGGKSAHITIVPAASGIPAVLGEIYANIFQQMGAASLQVLDIRSPME
ARDPDNVEKIRFSTGIYFTGGDQERLAEVLAHSELMEAIRQQWQRGQTVIAGTSAGASALGQQMISRGYSGEPPTPAIVT
VKTGLGLLPRVIIDQHFHQRNRLVRLVTAVAHYPQCLGIGIDENTAVVIQADDVMEVIGLGTVTIVDGTQLYSTVQEAAA
DEYFRLHNARIHFLPPGSRFDLNTLSPL

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 29194; Mature: 29194

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPITARSDIIAVGGAEDKENERHILWEFFRRAGGKSAHITIVPAASGIPAVLGEIYAN
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH
IFQQMGAASLQVLDIRSPMEARDPDNVEKIRFSTGIYFTGGDQERLAEVLAHSELMEAIR
HHHHCCCCCEEEEECCCCCCCCCCCCHHEEEEECCEEEECCCHHHHHHHHHHHHHHHHHH
QQWQRGQTVIAGTSAGASALGQQMISRGYSGEPPTPAIVTVKTGLGLLPRVIIDQHFHQR
HHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
NRLVRLVTAVAHYPQCLGIGIDENTAVVIQADDVMEVIGLGTVTIVDGTQLYSTVQEAAA
HHHHHHHHHHHHCHHHEECCCCCCCEEEEECCHHHHHHCCCEEEEECCHHHHHHHHHHHH
DEYFRLHNARIHFLPPGSRFDLNTLSPL
HHHHHHHCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKDPITARSDIIAVGGAEDKENERHILWEFFRRAGGKSAHITIVPAASGIPAVLGEIYAN
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH
IFQQMGAASLQVLDIRSPMEARDPDNVEKIRFSTGIYFTGGDQERLAEVLAHSELMEAIR
HHHHCCCCCEEEEECCCCCCCCCCCCHHEEEEECCEEEECCCHHHHHHHHHHHHHHHHHH
QQWQRGQTVIAGTSAGASALGQQMISRGYSGEPPTPAIVTVKTGLGLLPRVIIDQHFHQR
HHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
NRLVRLVTAVAHYPQCLGIGIDENTAVVIQADDVMEVIGLGTVTIVDGTQLYSTVQEAAA
HHHHHHHHHHHHCHHHEECCCCCCCEEEEECCHHHHHHCCCEEEEECCHHHHHHHHHHHH
DEYFRLHNARIHFLPPGSRFDLNTLSPL
HHHHHHHCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11131019 [H]