| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609490
Identifier: 86609490
GI number: 86609490
Start: 2143237
End: 2143479
Strand: Reverse
Name: 86609490
Synonym: CYB_2042
Alternate gene names: NA
Gene position: 2143479-2143237 (Counterclockwise)
Preceding gene: 86609493
Following gene: 86609479
Centisome position: 70.35
GC content: 53.5
Gene sequence:
>243_bases ATGGCCAGAAAACCTGACGGATATCTTGTCCACATCATGCTGGAAGGTGGACAAACCATGCAGGTACGGGTCAAAGAAGC CAGAGAATACACCGAGCTGATCAACAACCTCATGGTGGGCGGCGAAGAGTTCATCACCTTGCCCAAGCAAATGGACAATG AGTACATGATCGTGCGTCCTCAACGGGTGTCCGGCGTGTCGGTGGAGGCGATCTACGCTTCCAGCGTTGGCATCGACCTA TAG
Upstream 100 bases:
>100_bases CACGGAAGAGTCAGGGGTTGGTTAGGGGTCTCAAAAGGGGGAATAATGTTCATAAGAACACCCCTCGTCTCGTCCTTCGG TTCACCCAGCAGGAGCATCC
Downstream 100 bases:
>100_bases AGCCTATAGAGCAGACCAAGGTCAGGGATCCCTTGAGTATCGCCGGGCTGACAACGCAAAGCCCCCACCACTAGGGGCAG GGGCTGCCAGAGGACTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MARKPDGYLVHIMLEGGQTMQVRVKEAREYTELINNLMVGGEEFITLPKQMDNEYMIVRPQRVSGVSVEAIYASSVGIDL
Sequences:
>Translated_80_residues MARKPDGYLVHIMLEGGQTMQVRVKEAREYTELINNLMVGGEEFITLPKQMDNEYMIVRPQRVSGVSVEAIYASSVGIDL >Mature_79_residues ARKPDGYLVHIMLEGGQTMQVRVKEAREYTELINNLMVGGEEFITLPKQMDNEYMIVRPQRVSGVSVEAIYASSVGIDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9018; Mature: 8886
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKPDGYLVHIMLEGGQTMQVRVKEAREYTELINNLMVGGEEFITLPKQMDNEYMIVRP CCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEEC QRVSGVSVEAIYASSVGIDL CCCCCEEEEEEEECCCCCCC >Mature Secondary Structure ARKPDGYLVHIMLEGGQTMQVRVKEAREYTELINNLMVGGEEFITLPKQMDNEYMIVRP CCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEEC QRVSGVSVEAIYASSVGIDL CCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA