| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609481
Identifier: 86609481
GI number: 86609481
Start: 2135170
End: 2135931
Strand: Direct
Name: 86609481
Synonym: CYB_2033
Alternate gene names: NA
Gene position: 2135170-2135931 (Clockwise)
Preceding gene: 86609480
Following gene: 86609482
Centisome position: 70.08
GC content: 64.17
Gene sequence:
>762_bases ATGGCTAACTACCCGATGCGAGGCCGTTCTTCTCCTGCTTCTGGCGGTTTTCCCTTGGGCACCTTGGTGGTGGTGAGTGT CTCGGTTGGGGCTCTGGCCGCCTTGGCTTGGCAGTTGTGGCAGCTCGTCGCCCCCATGTTGGCCCCCCCTGCCCCGCCTC AATTTCCGCAGGCGGTGCGCTTGGATCCCTTGCCCCGCCCAGCCAGTTTTCCCTCTCCCCCCTCTGGCCCTGCTGCAGGC ACTGTTGACCCTGAGGGATTTCCCCCCGGCAGCCGCGGGCGGGTGATCGAGCCAATTGGCCTGGCAATCCGCAGCCAACC TTCTGCCGATGGAGCCTACCAAGGGGGAATTGTGGTGGGGGAAACGGTGACGGTGTTGGAGTACAGCGCCGATGGTCGTT GGCAACGGGTGCGGCGGGAGTTGAACGGACAAGAGGGCTGGGTGCGCGCCGGCAATTTGGGCCCTGTGGATGGTGCTTCA GCTTCAACTTCTACAGCTCCCACGGTTGAACCCAACCCTGAATTAACTCCTTTGCCGGCTCGACCCCCCATGGTGGCAGT AGGTGGGCAGGGACGGGTGATCGAGCCCATTGGCCTGGCGCTGCGGGCCACTCCAGAGCGGGAGGGAACCTACATTGGTG GTGTGCCCATGAACGAGGTGGTGACGGTGCTGGGCCTCAGCGAAGATGGTCGTTGGCAGCGCATCCGCCGTCAGAATGGG CAGGAAGGTTGGGTGCGGGCGGGGAATCTGGCGCAGGAGTAG
Upstream 100 bases:
>100_bases CGCAGCAGTCGTGCTCTGGCTTTCGTAAATCCCCGGTTTTGACGGGGATCCCATCTTCTCTGCGGATTCTTGCCTGCAGC ATTGCGGGAAGGTATTTCGG
Downstream 100 bases:
>100_bases CCCTTGCCATAGGCATAGCCCTACAGATGCCCTGGTGGGGGATTGTGACGACCGGGAAGGCTGTGTTTCGGTAGAACAGT ACCGATGCCAAGCTATGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAG TVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGAS ASTSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG QEGWVRAGNLAQE
Sequences:
>Translated_253_residues MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAG TVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGAS ASTSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG QEGWVRAGNLAQE >Mature_252_residues ANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAGT VDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASA STSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNGQ EGWVRAGNLAQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26466; Mature: 26335
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LDPLPRPASFPSPPSGPAAGTVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCEEEC ETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASASTSTAPTVEPNPELTPLPA CEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG CCCEEEECCCCCEECCCCEEEEECCCCCCCEECCCCHHHHEEEEECCCCCHHHHHHHCCC QEGWVRAGNLAQE CCCCEECCCCCCC >Mature Secondary Structure ANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LDPLPRPASFPSPPSGPAAGTVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCEEEC ETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASASTSTAPTVEPNPELTPLPA CEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG CCCEEEECCCCCEECCCCEEEEECCCCCCCEECCCCHHHHEEEEECCCCCHHHHHHHCCC QEGWVRAGNLAQE CCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA