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The map label for this gene is 86609476

Identifier: 86609476

GI number: 86609476

Start: 2130061

End: 2131608

Strand: Reverse

Name: 86609476

Synonym: CYB_2028

Alternate gene names: NA

Gene position: 2131608-2130061 (Counterclockwise)

Preceding gene: 86609477

Following gene: 86609475

Centisome position: 69.96

GC content: 60.34

Gene sequence:

>1548_bases
TTGCCTTACCTGGATCGCTTTGGCCCTCAAGAGGCCAAGCTGCCGCCGGACAACCTGCTGGAGCAATGGCGGCGGGATCG
CCAAGCCCTGGCAGCCGCTGTGTTTGAGCGATTCCCCGGAGAACAGGTTGCGCCGGGCAATGAAGCTCTCTTGGCAGCCA
TGGCCGACGGGGCGGAGCGGATCTACGGCGGACGGATTGCCGCAGAGCTGTTTTGGCAACCGCAGGAAGATCTCAACTGT
ACTGCTGAGGCAGAGCTGTTGCAGCTTGCTTCTGAACCTGTCCCTCACTCCTCCTCTCCAAGGGATCCCATCCCTGCCCC
AGAAGACTGCGAGATGGTGCCCGCTCTTGCGTTGCCGCCTGAAGCTGTTCCAGAGGGACGTTCAGTTTGGGTGAGCAGCT
CCCTGGATCTGCTGATTCGGGATCCCGCTCTCGTTGGCAGAAGTCGCCACGCCGCCCGATCCTCTTACCTGCCGGTTCAT
ATTCGTATCGGCAAACGCCCCAAACCGGAATACGAATTGTTGCTGGCTTTGCAGGCAGAGTTGCTCGGATCCCTGCAGGG
AAACGTTCCCAAGCGGGGCATTTTGATCCTGAAAGATGGGAAGTGGCACCCCGTCCACCTGAGCCGCCGACGAGCACAGG
TGCGGCAATTGCTGCAGGAGTACCTGCACTCCCTCAACCAGCCGGAACCACCGCAGGTGTTCATGGCCCGCAGCCGCTGC
CATCTTTGCCACTGGCGGGAGCATTGTCGGCAGTTGAACGCCGCCGCTCAACCCCTCAGCCTGCTGCCGGGCGTAACGGG
ATCCCGCTATCCCCTTTTGCAAGAGGCGGGGATCCACTCGATTGAAGCCCTGGCCAACGCTCAGTTGGATAGGTTGCAAG
CCATTCCCAAGTTGGGATCCGGCGTGGCCCTGCAACTGCAGCTGCAAGCCCGTGCCACCCTCAGCCGGCAGCCTCTCTGG
ATTCAATCCCCCCCGGAAACCCTGCCCACCACACCCGTAGAGCTGTACTTCGATATCGAGGCGGATCCCCGCCACAACGT
CGCCTATCTGCTGGGGCTGCTGGTGGTGGAGCAAGCCGAGGGGAAAAAGGTTGCGAGCTATCACAGTTGCCTGGCCGCCG
AGCCGCGGGAAGAAAGGCAAGCTTGGGAGCAATTCTTGCAACTGGCACAACGCTATCCTGACGCTCCCATCTACCACTTT
CACGGCTTTGAAGTGCAGACCTGCCGACGGCTGGGGGAGCAATACCGCACGGATCCCCGACAGCTGCGGCAGTTGTTGCA
GCGCTTTGTGGATTTACAGGCCTGGGTGCAACGCTCGGTGGTGCTGCCGATCGAGAGCTATTCCCTGAAAAACATCGCCC
GCTGGTTGGGGTTTCAGTGGCGTCTGCCTGATGCCAATGGCGCCCAGTCCATTTATTGGTATAGCCAATGGCTGGAAACT
CGGGAGCGCAGATATTTGGAGCACTCGATTATCTACAACGAGGATGACTGCCGGGCTACCCACCGCCTAAAAGACTGGCT
GTCCCAAGGAGTCCTCCATGCCGAATGA

Upstream 100 bases:

>100_bases
GCAGAGCTGAGGTTTTCCACCGTTGGAGTGCCAGGTTGCAGCAGCAGGACAGGGTTCTGTTGAGGCTGAGGAGCTGTTTG
CTTTCTTTCGTTGCCGACGC

Downstream 100 bases:

>100_bases
TGCGAATAAATTGACAAAGACGGCCTATCCCCAGCCGCAAATGCCGCAGCTTGCGCCGCCAGTCTTGTGGCCAGTTGCTG
AGGTTTCGTTTAGAATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: RecB Family-Like Nuclease; Nuclease; ATPase; Transposase; Transposase IS; DNA Repair Protein; Nuclease-Like Protein; RNA Helicase

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MPYLDRFGPQEAKLPPDNLLEQWRRDRQALAAAVFERFPGEQVAPGNEALLAAMADGAERIYGGRIAAELFWQPQEDLNC
TAEAELLQLASEPVPHSSSPRDPIPAPEDCEMVPALALPPEAVPEGRSVWVSSSLDLLIRDPALVGRSRHAARSSYLPVH
IRIGKRPKPEYELLLALQAELLGSLQGNVPKRGILILKDGKWHPVHLSRRRAQVRQLLQEYLHSLNQPEPPQVFMARSRC
HLCHWREHCRQLNAAAQPLSLLPGVTGSRYPLLQEAGIHSIEALANAQLDRLQAIPKLGSGVALQLQLQARATLSRQPLW
IQSPPETLPTTPVELYFDIEADPRHNVAYLLGLLVVEQAEGKKVASYHSCLAAEPREERQAWEQFLQLAQRYPDAPIYHF
HGFEVQTCRRLGEQYRTDPRQLRQLLQRFVDLQAWVQRSVVLPIESYSLKNIARWLGFQWRLPDANGAQSIYWYSQWLET
RERRYLEHSIIYNEDDCRATHRLKDWLSQGVLHAE

Sequences:

>Translated_515_residues
MPYLDRFGPQEAKLPPDNLLEQWRRDRQALAAAVFERFPGEQVAPGNEALLAAMADGAERIYGGRIAAELFWQPQEDLNC
TAEAELLQLASEPVPHSSSPRDPIPAPEDCEMVPALALPPEAVPEGRSVWVSSSLDLLIRDPALVGRSRHAARSSYLPVH
IRIGKRPKPEYELLLALQAELLGSLQGNVPKRGILILKDGKWHPVHLSRRRAQVRQLLQEYLHSLNQPEPPQVFMARSRC
HLCHWREHCRQLNAAAQPLSLLPGVTGSRYPLLQEAGIHSIEALANAQLDRLQAIPKLGSGVALQLQLQARATLSRQPLW
IQSPPETLPTTPVELYFDIEADPRHNVAYLLGLLVVEQAEGKKVASYHSCLAAEPREERQAWEQFLQLAQRYPDAPIYHF
HGFEVQTCRRLGEQYRTDPRQLRQLLQRFVDLQAWVQRSVVLPIESYSLKNIARWLGFQWRLPDANGAQSIYWYSQWLET
RERRYLEHSIIYNEDDCRATHRLKDWLSQGVLHAE
>Mature_514_residues
PYLDRFGPQEAKLPPDNLLEQWRRDRQALAAAVFERFPGEQVAPGNEALLAAMADGAERIYGGRIAAELFWQPQEDLNCT
AEAELLQLASEPVPHSSSPRDPIPAPEDCEMVPALALPPEAVPEGRSVWVSSSLDLLIRDPALVGRSRHAARSSYLPVHI
RIGKRPKPEYELLLALQAELLGSLQGNVPKRGILILKDGKWHPVHLSRRRAQVRQLLQEYLHSLNQPEPPQVFMARSRCH
LCHWREHCRQLNAAAQPLSLLPGVTGSRYPLLQEAGIHSIEALANAQLDRLQAIPKLGSGVALQLQLQARATLSRQPLWI
QSPPETLPTTPVELYFDIEADPRHNVAYLLGLLVVEQAEGKKVASYHSCLAAEPREERQAWEQFLQLAQRYPDAPIYHFH
GFEVQTCRRLGEQYRTDPRQLRQLLQRFVDLQAWVQRSVVLPIESYSLKNIARWLGFQWRLPDANGAQSIYWYSQWLETR
ERRYLEHSIIYNEDDCRATHRLKDWLSQGVLHAE

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58726; Mature: 58594

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLDRFGPQEAKLPPDNLLEQWRRDRQALAAAVFERFPGEQVAPGNEALLAAMADGAER
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHH
IYGGRIAAELFWQPQEDLNCTAEAELLQLASEPVPHSSSPRDPIPAPEDCEMVPALALPP
HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EAVPEGRSVWVSSSLDLLIRDPALVGRSRHAARSSYLPVHIRIGKRPKPEYELLLALQAE
CCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
LLGSLQGNVPKRGILILKDGKWHPVHLSRRRAQVRQLLQEYLHSLNQPEPPQVFMARSRC
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
HLCHWREHCRQLNAAAQPLSLLPGVTGSRYPLLQEAGIHSIEALANAQLDRLQAIPKLGS
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GVALQLQLQARATLSRQPLWIQSPPETLPTTPVELYFDIEADPRHNVAYLLGLLVVEQAE
CEEEEEEEEHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC
GKKVASYHSCLAAEPREERQAWEQFLQLAQRYPDAPIYHFHGFEVQTCRRLGEQYRTDPR
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHH
QLRQLLQRFVDLQAWVQRSVVLPIESYSLKNIARWLGFQWRLPDANGAQSIYWYSQWLET
HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHH
RERRYLEHSIIYNEDDCRATHRLKDWLSQGVLHAE
HHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PYLDRFGPQEAKLPPDNLLEQWRRDRQALAAAVFERFPGEQVAPGNEALLAAMADGAER
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHH
IYGGRIAAELFWQPQEDLNCTAEAELLQLASEPVPHSSSPRDPIPAPEDCEMVPALALPP
HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EAVPEGRSVWVSSSLDLLIRDPALVGRSRHAARSSYLPVHIRIGKRPKPEYELLLALQAE
CCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
LLGSLQGNVPKRGILILKDGKWHPVHLSRRRAQVRQLLQEYLHSLNQPEPPQVFMARSRC
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
HLCHWREHCRQLNAAAQPLSLLPGVTGSRYPLLQEAGIHSIEALANAQLDRLQAIPKLGS
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GVALQLQLQARATLSRQPLWIQSPPETLPTTPVELYFDIEADPRHNVAYLLGLLVVEQAE
CEEEEEEEEHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC
GKKVASYHSCLAAEPREERQAWEQFLQLAQRYPDAPIYHFHGFEVQTCRRLGEQYRTDPR
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHH
QLRQLLQRFVDLQAWVQRSVVLPIESYSLKNIARWLGFQWRLPDANGAQSIYWYSQWLET
HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHH
RERRYLEHSIIYNEDDCRATHRLKDWLSQGVLHAE
HHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA