| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is ureE [H]
Identifier: 86609467
GI number: 86609467
Start: 2124009
End: 2124485
Strand: Reverse
Name: ureE [H]
Synonym: CYB_2018
Alternate gene names: 86609467
Gene position: 2124485-2124009 (Counterclockwise)
Preceding gene: 86609468
Following gene: 86609464
Centisome position: 69.73
GC content: 62.05
Gene sequence:
>477_bases ATGAGCGAAGATGCCCATGCTGCGGGAGAGGATCCCGCGGCCATTACGGTGACGCAACTGCTGGACGAGCCGCCAGAGGG GATCCCCGGCCACTTGGAAGTGGTTGCCCTCACTTGGCACGACCGCCAGCGATCCCGGCAACGGCTGGTGAGCGACTGGG GTACCGAGATCCAGTTGATGCTGCCTCGGGGCACCCATCTTCACGATGGGGATCTGCTCTATGCGGATGCGCAGCGACAC ATTCGGGTCAAAGCCCAACCCGAACCGGTGCTCTTGATTCAACCTGAAAACCCCATCCAGATGGGCCAGGTGATTCATCA ACTGGGCAATTGGCACCGCCCGGCCCACGTTTCCCCCCAAGGGCAGATCCTGGCGCTGGCCGATGATCCGCTGCAGGACT GGCTGGCCCACATGGGGATCCCGTTTCGGTTGGAGATGGCTGTCTTCGAGCCCAACCTGTTGGCCCACAGCCATTAA
Upstream 100 bases:
>100_bases AGGTGCTGGTGACTCTGAAAACCAAGGTGCTGCGCCTTTCCACCGAAGTGGAGTTCTCTCGCCTTCAAGAAGACCTCAGC CAATATCTGGAGTCCCTAAC
Downstream 100 bases:
>100_bases CCTGGGCCTTTCTGAGCGCAAACCCGTCCCTCCGACTCATGGCCTAGGCTCCAGCCTCTGCTTCTCGGGTTGCCAACCGC GCTGCAAACTCTCGGTGTTC
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSEDAHAAGEDPAAITVTQLLDEPPEGIPGHLEVVALTWHDRQRSRQRLVSDWGTEIQLMLPRGTHLHDGDLLYADAQRH IRVKAQPEPVLLIQPENPIQMGQVIHQLGNWHRPAHVSPQGQILALADDPLQDWLAHMGIPFRLEMAVFEPNLLAHSH
Sequences:
>Translated_158_residues MSEDAHAAGEDPAAITVTQLLDEPPEGIPGHLEVVALTWHDRQRSRQRLVSDWGTEIQLMLPRGTHLHDGDLLYADAQRH IRVKAQPEPVLLIQPENPIQMGQVIHQLGNWHRPAHVSPQGQILALADDPLQDWLAHMGIPFRLEMAVFEPNLLAHSH >Mature_157_residues SEDAHAAGEDPAAITVTQLLDEPPEGIPGHLEVVALTWHDRQRSRQRLVSDWGTEIQLMLPRGTHLHDGDLLYADAQRHI RVKAQPEPVLLIQPENPIQMGQVIHQLGNWHRPAHVSPQGQILALADDPLQDWLAHMGIPFRLEMAVFEPNLLAHSH
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 17732; Mature: 17601
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDAHAAGEDPAAITVTQLLDEPPEGIPGHLEVVALTWHDRQRSRQRLVSDWGTEIQLM CCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEE LPRGTHLHDGDLLYADAQRHIRVKAQPEPVLLIQPENPIQMGQVIHQLGNWHRPAHVSPQ ECCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC GQILALADDPLQDWLAHMGIPFRLEMAVFEPNLLAHSH CCEEEEECCCHHHHHHHCCCCEEEEEEEECCCEECCCC >Mature Secondary Structure SEDAHAAGEDPAAITVTQLLDEPPEGIPGHLEVVALTWHDRQRSRQRLVSDWGTEIQLM CCCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEE LPRGTHLHDGDLLYADAQRHIRVKAQPEPVLLIQPENPIQMGQVIHQLGNWHRPAHVSPQ ECCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC GQILALADDPLQDWLAHMGIPFRLEMAVFEPNLLAHSH CCEEEEECCCHHHHHHHCCCCEEEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA