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The map label for this gene is amiC [H]

Identifier: 86609464

GI number: 86609464

Start: 2119497

End: 2120771

Strand: Reverse

Name: amiC [H]

Synonym: CYB_2015

Alternate gene names: 86609464

Gene position: 2120771-2119497 (Counterclockwise)

Preceding gene: 86609467

Following gene: 86609463

Centisome position: 69.61

GC content: 57.02

Gene sequence:

>1275_bases
ATGGCTCTATCATTTAATCGTCGTCAAGTGCTGAAAATGGGCGCTCTGGCCGGAGCCGGGGCTGCCCTAGGGCCGCAGAT
CTGGGTGAAGCGATCCGTGCCCGCCTACGCCCAGGGAGAGACCATCCGCGTTGGCATTTTGCACTCCCTTAGCGGCACCA
TGGCCATTTCGGAAACCAGCGTGGTGGATGCGGAAAAGCTGGCCATCAAAGAGATCAATGCCGCCGGTGGGGTTTTGGGC
AAGCAGATCGAGCCGATTATCGAGGATGGCGCTTCCGATTGGCCAACCTTTGCGGAGAAAGCCACCAAACTGATCGATGT
GGACAAGGTGGCAACGGTATTCGGCTGCTGGACTTCGGCCAGTCGCAAAGCCGTGTTGCCGGTGTTTGAATCCAAGCAGC
ACCTGCTCTGGTATCCCGTGCAGTACGAAGGACAAGAGTGCTCCAAAAACATCTTCTACACCGGCGCTGCCCCCAACCAG
CAGATCGAGCCTTCGGTGGAATGGCTGCTCAAGAACAAGGGCAAAGAGTTCTTCCTGGTGGGATCCGACTACGTGTTCCC
CCGCACGGCCAACACCATCATCAAGGCCCAGTTGGAAGCCCTGGGGGGCAAGGTGGTGGGTGAAGACTATCTGCCTTTGG
GCAACACAGAAGTTACCCCCATCATCAGCAAGATCCGGGCCGCTCTTCCCAATGGCGGTGTGATCTACAACAGCTTGAAT
GGCGACAGCAACGTGGCCTTTTTCAAACAACTGAAAGGGGCAGGGCTGGGGCCGGATCGTTATCCTTCCATGTCCGTCAG
CATTGCCGAAGAAGAGGTGCAGGCCATTGGCCCCGAATTTTTGGAAGGGCACTTCGCCGCCTGGAACTACTTTATGACGG
TGGATACGCCTGCCAACAAGAAGTTTGTGGAGGCTTTCAAGGCAGAATACGGCCAAAACCGCGTCACCAACGACCCGATG
GAAGCCGCCTACATCATGGTTTACATCTGGAAGCAGGCGGCAGAAAAAGCGGGAACGGTGGAGATCGACGCCGTGCGGCA
GGCAGCCTACGGCCAGACCTTCGATGCCCCTGAAGGCTTGGTAACCATGAACACCAACCACCACCTGACCAAATATGTGC
GGATCGGCCAGGTGCGCTCCGATGGCTTGTTTGATGTCATCTTTTCTACGGATGCCGTGGAACCACAGCCCTGGAACCAG
TTTGTGGCAGAGACCAAGGGCTTTGCCTGCGATTGGTCAGATCCGGCCAAGGGCGGTCGCTACAAAGTCAGCTAG

Upstream 100 bases:

>100_bases
GGCGAGGTGATGAGCTAAGTGCTTCCCTCTGTTGGCCGGGCTGCTGCAACAACTGGACTTCTTAATACCCTTTGCACTCA
CTTCGTTTCGGAGATCACCG

Downstream 100 bases:

>100_bases
TCCTGGCCAGGGCTGGGATCCCTTGCCGTTTGGATAGGGTCGGGGATCCCGCCTAGATGCTCGGTTAGCCTCCCTAGTTT
AGTTGGAAGGAGGATCCCCT

Product: urea ABC transporter, periplasmic urea-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MALSFNRRQVLKMGALAGAGAALGPQIWVKRSVPAYAQGETIRVGILHSLSGTMAISETSVVDAEKLAIKEINAAGGVLG
KQIEPIIEDGASDWPTFAEKATKLIDVDKVATVFGCWTSASRKAVLPVFESKQHLLWYPVQYEGQECSKNIFYTGAAPNQ
QIEPSVEWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKVVGEDYLPLGNTEVTPIISKIRAALPNGGVIYNSLN
GDSNVAFFKQLKGAGLGPDRYPSMSVSIAEEEVQAIGPEFLEGHFAAWNYFMTVDTPANKKFVEAFKAEYGQNRVTNDPM
EAAYIMVYIWKQAAEKAGTVEIDAVRQAAYGQTFDAPEGLVTMNTNHHLTKYVRIGQVRSDGLFDVIFSTDAVEPQPWNQ
FVAETKGFACDWSDPAKGGRYKVS

Sequences:

>Translated_424_residues
MALSFNRRQVLKMGALAGAGAALGPQIWVKRSVPAYAQGETIRVGILHSLSGTMAISETSVVDAEKLAIKEINAAGGVLG
KQIEPIIEDGASDWPTFAEKATKLIDVDKVATVFGCWTSASRKAVLPVFESKQHLLWYPVQYEGQECSKNIFYTGAAPNQ
QIEPSVEWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKVVGEDYLPLGNTEVTPIISKIRAALPNGGVIYNSLN
GDSNVAFFKQLKGAGLGPDRYPSMSVSIAEEEVQAIGPEFLEGHFAAWNYFMTVDTPANKKFVEAFKAEYGQNRVTNDPM
EAAYIMVYIWKQAAEKAGTVEIDAVRQAAYGQTFDAPEGLVTMNTNHHLTKYVRIGQVRSDGLFDVIFSTDAVEPQPWNQ
FVAETKGFACDWSDPAKGGRYKVS
>Mature_423_residues
ALSFNRRQVLKMGALAGAGAALGPQIWVKRSVPAYAQGETIRVGILHSLSGTMAISETSVVDAEKLAIKEINAAGGVLGK
QIEPIIEDGASDWPTFAEKATKLIDVDKVATVFGCWTSASRKAVLPVFESKQHLLWYPVQYEGQECSKNIFYTGAAPNQQ
IEPSVEWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKVVGEDYLPLGNTEVTPIISKIRAALPNGGVIYNSLNG
DSNVAFFKQLKGAGLGPDRYPSMSVSIAEEEVQAIGPEFLEGHFAAWNYFMTVDTPANKKFVEAFKAEYGQNRVTNDPME
AAYIMVYIWKQAAEKAGTVEIDAVRQAAYGQTFDAPEGLVTMNTNHHLTKYVRIGQVRSDGLFDVIFSTDAVEPQPWNQF
VAETKGFACDWSDPAKGGRYKVS

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46296; Mature: 46165

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSFNRRQVLKMGALAGAGAALGPQIWVKRSVPAYAQGETIRVGILHSLSGTMAISETS
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEEECCCC
VVDAEKLAIKEINAAGGVLGKQIEPIIEDGASDWPTFAEKATKLIDVDKVATVFGCWTSA
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SRKAVLPVFESKQHLLWYPVQYEGQECSKNIFYTGAAPNQQIEPSVEWLLKNKGKEFFLV
CCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEE
GSDYVFPRTANTIIKAQLEALGGKVVGEDYLPLGNTEVTPIISKIRAALPNGGVIYNSLN
CCCEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
GDSNVAFFKQLKGAGLGPDRYPSMSVSIAEEEVQAIGPEFLEGHFAAWNYFMTVDTPANK
CCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHCCCEEEEEEEEEEECCCCH
KFVEAFKAEYGQNRVTNDPMEAAYIMVYIWKQAAEKAGTVEIDAVRQAAYGQTFDAPEGL
HHHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCCE
VTMNTNHHLTKYVRIGQVRSDGLFDVIFSTDAVEPQPWNQFVAETKGFACDWSDPAKGGR
EEECCCCCEEEHEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCEECCCCCCCCCC
YKVS
EECC
>Mature Secondary Structure 
ALSFNRRQVLKMGALAGAGAALGPQIWVKRSVPAYAQGETIRVGILHSLSGTMAISETS
CCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEEECCCC
VVDAEKLAIKEINAAGGVLGKQIEPIIEDGASDWPTFAEKATKLIDVDKVATVFGCWTSA
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SRKAVLPVFESKQHLLWYPVQYEGQECSKNIFYTGAAPNQQIEPSVEWLLKNKGKEFFLV
CCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEE
GSDYVFPRTANTIIKAQLEALGGKVVGEDYLPLGNTEVTPIISKIRAALPNGGVIYNSLN
CCCEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
GDSNVAFFKQLKGAGLGPDRYPSMSVSIAEEEVQAIGPEFLEGHFAAWNYFMTVDTPANK
CCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHCCCEEEEEEEEEEECCCCH
KFVEAFKAEYGQNRVTNDPMEAAYIMVYIWKQAAEKAGTVEIDAVRQAAYGQTFDAPEGL
HHHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCCE
VTMNTNHHLTKYVRIGQVRSDGLFDVIFSTDAVEPQPWNQFVAETKGFACDWSDPAKGGR
EEECCCCCEEEHEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCEECCCCCCCCCC
YKVS
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]