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The map label for this gene is glgB [H]

Identifier: 86609428

GI number: 86609428

Start: 2076486

End: 2078777

Strand: Direct

Name: glgB [H]

Synonym: CYB_1978

Alternate gene names: 86609428

Gene position: 2076486-2078777 (Clockwise)

Preceding gene: 86609427

Following gene: 86609430

Centisome position: 68.16

GC content: 56.5

Gene sequence:

>2292_bases
ATGGGCTTTCTCCTGTCTGCTGAACAAGTGGGTCAGTTTGTTTCCAACCAATGGCAGGATCCCTATGCCGTTTTGGGCCC
CCAGCAGATAGAAGAGGCCGGGAAATCCTTTGGGTTGGTGCGCGCCCTTGTGCCCAATGCTCGGCAGGTTTGGCTGGTGG
AACGCGCCACTGGACAGGCTTACCCGATGCAGCCGCTGCACCCGGAAACGCTATTCGAGCTGCGCTTTGAGCCGGGAACC
CCTCTGCCGGACTATTTTTTGCGGGCCCAACGGGTCTGGGATCCCCAAGGGGAACACTTGGAAGAATGGGAGGATCCCTA
CCGCTTTCCCTTGGAGAAGGTCAACCACATTGGCGAGCTGGATCGCTACTTGTTCAACGAGGGGAATCACCACCGCATTT
ACGACAAGCTGGGCGCCCATCTCATCACGGTGGATGGGGTGAAGGGGGTGCATTTCGCCGTCTGGGCTCCCAACGCCCGC
AACGTCAGCGTTATCGGCGATTTTAACCACTGGGACGGGCGTCAACACCAGATGAAGCGGCTGGGCGAAAGCGGCATCTG
GGCGGTGTTCATCCCCGGCATAGGGCCAGGCGCCATCTACAAGTACGAGGTGAAAACTTCCTGGGGGGATATCTACGAAA
AATCGGATCCCTATGGCTTTCAACAGGAGGTGCGCCCCAAAACCGGCTCCATCGTAGCCGACCTCAACACCTACACCTGG
CACGACCAAGCCTGGCTGGAAAAACGCGCCGCCACCGATCCCCTGCGCTCGCCGATTTCGGTTTATGAGGTGCATCTGGG
ATCCTGGATGCACGCCTCGGCTGAAGATCCACCTGCCGAAGGGCAAAGTGTGCTGGTGGACCAAAAGCCCAACACTCGCT
TCCTCACCTACCGCGAGCTGGCGGACAAATTGATCCCCTATGTGAAGGAGCTGGGCTTTACCCACATCGAGCTGTTGCCG
GTGGCAGAACACCCCTTCGATGGCTCTTGGGGCTATCAAGTGATTGGCTACTATGCCGTAACATCCCGCTATGGATCCCC
GCAAGACTTTATGTATTTTGTCGATCGGGCTCACCAAGCCGGGATCGGCGTGATTGTCGATTGGGTGCCCGGGCATTTCC
CCAAAGATGGGCATGGGCTGGCTTTTTTCGACGGTACTCACCTGTACGAGTACGCCGACCCTCGCAAAGGCGAGCACAAA
GGTTGGGGCACTTTGGTCTTTAATTATGGCCGCAACGAGGTGCGCAATTATCTGGTGGCCAATGCCCTTTTTTGGTTCGA
GAAATACCACATCGATGGGATCCGGGTGGACGCGGTGGCCTCGATGCTTTATCTGGATTATGACCGCAAAGAGTGGATCC
CCAATCCCTACGGCGGGCGGGAACACCTCGAAGCCATCGACTTTTTCCGGCAGCTCAATACCCTCATTTTCAAATACAAC
CCCGGTGCGCTTTCCATTGCCGAAGAATCTACTGCTTGGCCGATGGTAACTTGGCCAACCCATGTGGGTGGGCTGGGCTT
CAACTTGAAGTGGAACATGGGTTGGATGCACGACATGTTGGATTATTTCCACATGGATCCCTGGTTCCGCCAGTTCCATC
CCCATTTGGTCACCTTCAGCCTCATGTATGCCTTCAGCGAAAATTACATGCTGGCCTTTTCTCATGATGAGGTGGTGCAT
GGCAAGAGCCACATGTTGGGCAAAATGCCGGGGGATCATTGGCATAAGTTCGCCAGTCTGCGGGCTTTGTATGGCTACAT
GTTCACCCACCCTGGCAAGAAAACCTTGTTCATGAGCATGGAGTTTGGCCAGTGGAATGAGTGGAATGTTTGGGCAGATC
TGGACTGGGAGCTGCTGCAGTATGAACCCCACGCCAAGTTGCGCCACTACGTGGCCAGCCTGAATCACCTGTTGCGCTCT
GAGCCTGCCCTGTATACCCAAGACACCAAACCGGAGGGGTTCCGCTGGATCGACTGCAGCGATCATCGCGGCATCGTTTC
CTTCATCCGCTATGGGGAGGATCCCAGTGAGTGGGTGGTGGTGGTTTGTAACTTCACGCCGGTGGTCTGGCCCAATTACC
GCATTGGGGTACCGGAACGAGGTTTTTATCGAGAGCTGCTCAACAGCGATGCTGTGGAGTTTTGGGGCAGCGGGGTAGGC
AATTTGGGGGGCAAGTGGACAGACGACTGGGCCTACCACAACTTGCCCTACTCCCTCGAGCTCTGCCTGCCGCAACTTTC
TACCTTGGTGCTGAAATGGCAGCCGCCGCAGCCGGTCGAGTCCCAGAATTGA

Upstream 100 bases:

>100_bases
CTTGCAGGGATTCTTTGCCTGGAGGCGGGCCTGGAGCTGACAGCGCAAACTGGGGGTCAGCCACCGCTAGACTAGAATGG
TCATTTACTGAGGGTTCCCG

Downstream 100 bases:

>100_bases
CACCCTGCTGGCTTCCTTCCGCCGCACTGGGAGGACGGGTCTGGAGACTTCGTTTTTTGGCCATTTGTAGTCCTTTCAAG
CTGGATTGAGACAATCCCCA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 763; Mature: 762

Protein sequence:

>763_residues
MGFLLSAEQVGQFVSNQWQDPYAVLGPQQIEEAGKSFGLVRALVPNARQVWLVERATGQAYPMQPLHPETLFELRFEPGT
PLPDYFLRAQRVWDPQGEHLEEWEDPYRFPLEKVNHIGELDRYLFNEGNHHRIYDKLGAHLITVDGVKGVHFAVWAPNAR
NVSVIGDFNHWDGRQHQMKRLGESGIWAVFIPGIGPGAIYKYEVKTSWGDIYEKSDPYGFQQEVRPKTGSIVADLNTYTW
HDQAWLEKRAATDPLRSPISVYEVHLGSWMHASAEDPPAEGQSVLVDQKPNTRFLTYRELADKLIPYVKELGFTHIELLP
VAEHPFDGSWGYQVIGYYAVTSRYGSPQDFMYFVDRAHQAGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEYADPRKGEHK
GWGTLVFNYGRNEVRNYLVANALFWFEKYHIDGIRVDAVASMLYLDYDRKEWIPNPYGGREHLEAIDFFRQLNTLIFKYN
PGALSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLDYFHMDPWFRQFHPHLVTFSLMYAFSENYMLAFSHDEVVH
GKSHMLGKMPGDHWHKFASLRALYGYMFTHPGKKTLFMSMEFGQWNEWNVWADLDWELLQYEPHAKLRHYVASLNHLLRS
EPALYTQDTKPEGFRWIDCSDHRGIVSFIRYGEDPSEWVVVVCNFTPVVWPNYRIGVPERGFYRELLNSDAVEFWGSGVG
NLGGKWTDDWAYHNLPYSLELCLPQLSTLVLKWQPPQPVESQN

Sequences:

>Translated_763_residues
MGFLLSAEQVGQFVSNQWQDPYAVLGPQQIEEAGKSFGLVRALVPNARQVWLVERATGQAYPMQPLHPETLFELRFEPGT
PLPDYFLRAQRVWDPQGEHLEEWEDPYRFPLEKVNHIGELDRYLFNEGNHHRIYDKLGAHLITVDGVKGVHFAVWAPNAR
NVSVIGDFNHWDGRQHQMKRLGESGIWAVFIPGIGPGAIYKYEVKTSWGDIYEKSDPYGFQQEVRPKTGSIVADLNTYTW
HDQAWLEKRAATDPLRSPISVYEVHLGSWMHASAEDPPAEGQSVLVDQKPNTRFLTYRELADKLIPYVKELGFTHIELLP
VAEHPFDGSWGYQVIGYYAVTSRYGSPQDFMYFVDRAHQAGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEYADPRKGEHK
GWGTLVFNYGRNEVRNYLVANALFWFEKYHIDGIRVDAVASMLYLDYDRKEWIPNPYGGREHLEAIDFFRQLNTLIFKYN
PGALSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLDYFHMDPWFRQFHPHLVTFSLMYAFSENYMLAFSHDEVVH
GKSHMLGKMPGDHWHKFASLRALYGYMFTHPGKKTLFMSMEFGQWNEWNVWADLDWELLQYEPHAKLRHYVASLNHLLRS
EPALYTQDTKPEGFRWIDCSDHRGIVSFIRYGEDPSEWVVVVCNFTPVVWPNYRIGVPERGFYRELLNSDAVEFWGSGVG
NLGGKWTDDWAYHNLPYSLELCLPQLSTLVLKWQPPQPVESQN
>Mature_762_residues
GFLLSAEQVGQFVSNQWQDPYAVLGPQQIEEAGKSFGLVRALVPNARQVWLVERATGQAYPMQPLHPETLFELRFEPGTP
LPDYFLRAQRVWDPQGEHLEEWEDPYRFPLEKVNHIGELDRYLFNEGNHHRIYDKLGAHLITVDGVKGVHFAVWAPNARN
VSVIGDFNHWDGRQHQMKRLGESGIWAVFIPGIGPGAIYKYEVKTSWGDIYEKSDPYGFQQEVRPKTGSIVADLNTYTWH
DQAWLEKRAATDPLRSPISVYEVHLGSWMHASAEDPPAEGQSVLVDQKPNTRFLTYRELADKLIPYVKELGFTHIELLPV
AEHPFDGSWGYQVIGYYAVTSRYGSPQDFMYFVDRAHQAGIGVIVDWVPGHFPKDGHGLAFFDGTHLYEYADPRKGEHKG
WGTLVFNYGRNEVRNYLVANALFWFEKYHIDGIRVDAVASMLYLDYDRKEWIPNPYGGREHLEAIDFFRQLNTLIFKYNP
GALSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLDYFHMDPWFRQFHPHLVTFSLMYAFSENYMLAFSHDEVVHG
KSHMLGKMPGDHWHKFASLRALYGYMFTHPGKKTLFMSMEFGQWNEWNVWADLDWELLQYEPHAKLRHYVASLNHLLRSE
PALYTQDTKPEGFRWIDCSDHRGIVSFIRYGEDPSEWVVVVCNFTPVVWPNYRIGVPERGFYRELLNSDAVEFWGSGVGN
LGGKWTDDWAYHNLPYSLELCLPQLSTLVLKWQPPQPVESQN

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=671, Percent_Identity=26.6766020864382, Blast_Score=169, Evalue=1e-41,
Organism=Escherichia coli, GI1789839, Length=760, Percent_Identity=47.1052631578947, Blast_Score=664, Evalue=0.0,
Organism=Escherichia coli, GI2367229, Length=350, Percent_Identity=27.1428571428571, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17554896, Length=393, Percent_Identity=29.0076335877863, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI32564391, Length=224, Percent_Identity=34.375, Blast_Score=143, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6320826, Length=419, Percent_Identity=28.1622911694511, Blast_Score=165, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28573410, Length=613, Percent_Identity=26.9168026101142, Blast_Score=174, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 88435; Mature: 88303

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLLSAEQVGQFVSNQWQDPYAVLGPQQIEEAGKSFGLVRALVPNARQVWLVERATGQA
CCCEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
YPMQPLHPETLFELRFEPGTPLPDYFLRAQRVWDPQGEHLEEWEDPYRFPLEKVNHIGEL
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
DRYLFNEGNHHRIYDKLGAHLITVDGVKGVHFAVWAPNARNVSVIGDFNHWDGRQHQMKR
HHHHHCCCCCEEHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHH
LGESGIWAVFIPGIGPGAIYKYEVKTSWGDIYEKSDPYGFQQEVRPKTGSIVADLNTYTW
CCCCCEEEEEECCCCCCCEEEEEEECCCCHHCCCCCCCCCHHHCCCCCCCEEEECCCEEE
HDQAWLEKRAATDPLRSPISVYEVHLGSWMHASAEDPPAEGQSVLVDQKPNTRFLTYREL
CHHHHHHHHCCCCHHCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCEEEEHHHH
ADKLIPYVKELGFTHIELLPVAEHPFDGSWGYQVIGYYAVTSRYGSPQDFMYFVDRAHQA
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCC
GIGVIVDWVPGHFPKDGHGLAFFDGTHLYEYADPRKGEHKGWGTLVFNYGRNEVRNYLVA
CCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHH
NALFWFEKYHIDGIRVDAVASMLYLDYDRKEWIPNPYGGREHLEAIDFFRQLNTLIFKYN
HHHHHHHHHCCCCEEHHHHHHHHHEECCHHHCCCCCCCCHHHHHHHHHHHHHCEEEEEEC
PGALSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLDYFHMDPWFRQFHPHLVTFS
CCEEEECCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHH
LMYAFSENYMLAFSHDEVVHGKSHMLGKMPGDHWHKFASLRALYGYMFTHPGKKTLFMSM
HHHHHCCCEEEEECCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
EFGQWNEWNVWADLDWELLQYEPHAKLRHYVASLNHLLRSEPALYTQDTKPEGFRWIDCS
ECCCCCCCEEEECCCHHEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECC
DHRGIVSFIRYGEDPSEWVVVVCNFTPVVWPNYRIGVPERGFYRELLNSDAVEFWGSGVG
CCCCHHHHHHCCCCCCCEEEEEECCCCEECCCEEECCCCCHHHHHHHCCCHHHHHCCCCC
NLGGKWTDDWAYHNLPYSLELCLPQLSTLVLKWQPPQPVESQN
CCCCCCCCCCCCCCCCEEEHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GFLLSAEQVGQFVSNQWQDPYAVLGPQQIEEAGKSFGLVRALVPNARQVWLVERATGQA
CCEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
YPMQPLHPETLFELRFEPGTPLPDYFLRAQRVWDPQGEHLEEWEDPYRFPLEKVNHIGEL
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
DRYLFNEGNHHRIYDKLGAHLITVDGVKGVHFAVWAPNARNVSVIGDFNHWDGRQHQMKR
HHHHHCCCCCEEHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHH
LGESGIWAVFIPGIGPGAIYKYEVKTSWGDIYEKSDPYGFQQEVRPKTGSIVADLNTYTW
CCCCCEEEEEECCCCCCCEEEEEEECCCCHHCCCCCCCCCHHHCCCCCCCEEEECCCEEE
HDQAWLEKRAATDPLRSPISVYEVHLGSWMHASAEDPPAEGQSVLVDQKPNTRFLTYREL
CHHHHHHHHCCCCHHCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCEEEEHHHH
ADKLIPYVKELGFTHIELLPVAEHPFDGSWGYQVIGYYAVTSRYGSPQDFMYFVDRAHQA
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCC
GIGVIVDWVPGHFPKDGHGLAFFDGTHLYEYADPRKGEHKGWGTLVFNYGRNEVRNYLVA
CCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHH
NALFWFEKYHIDGIRVDAVASMLYLDYDRKEWIPNPYGGREHLEAIDFFRQLNTLIFKYN
HHHHHHHHHCCCCEEHHHHHHHHHEECCHHHCCCCCCCCHHHHHHHHHHHHHCEEEEEEC
PGALSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLDYFHMDPWFRQFHPHLVTFS
CCEEEECCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHH
LMYAFSENYMLAFSHDEVVHGKSHMLGKMPGDHWHKFASLRALYGYMFTHPGKKTLFMSM
HHHHHCCCEEEEECCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
EFGQWNEWNVWADLDWELLQYEPHAKLRHYVASLNHLLRSEPALYTQDTKPEGFRWIDCS
ECCCCCCCEEEECCCHHEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECC
DHRGIVSFIRYGEDPSEWVVVVCNFTPVVWPNYRIGVPERGFYRELLNSDAVEFWGSGVG
CCCCHHHHHHCCCCCCCEEEEEECCCCEECCCEEECCCCCHHHHHHHCCCHHHHHCCCCC
NLGGKWTDDWAYHNLPYSLELCLPQLSTLVLKWQPPQPVESQN
CCCCCCCCCCCCCCCCEEEHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA