Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609419

Identifier: 86609419

GI number: 86609419

Start: 2065522

End: 2066715

Strand: Reverse

Name: 86609419

Synonym: CYB_1969

Alternate gene names: NA

Gene position: 2066715-2065522 (Counterclockwise)

Preceding gene: 86609420

Following gene: 86609418

Centisome position: 67.83

GC content: 51.34

Gene sequence:

>1194_bases
ATGGTGTTTAGAGCCGACCGGATCCTGGCAGTGTTGCAGCAAAAGCGGGAGGCCTTTGCCACTTTTGATCAAAGGCTGTC
GGAGCGCAGAGAATACTATAAGCAGGCCATGGAAAGCTTGTGCCAGTGGTCAAGCCTAGAGATTGCCGAAAAAATAGCTC
CATTCCCTTTCCCAGGCGCTTTACCTACTGCAGAGTGGGATCGCTACTCCAATTGGAGGATCCCTTTTGAGCAGGAATGG
GCCAATTACGAAGAAAGCCGCGATTGGGCGAAGTCGGTCATTGAAAATATTCCTACCTTTGCCGTAGATGGATCCCAGAT
TTATCCCAGCAAAGATCTGTCAATACCGGTGGCGCTGGTGCAAATTGGCTGGTATGAAAACCATCATTGTGCAACAGGCT
TGTACGAAAAAGACATTCAAGTGGATGTATTGACTCCAAGGGACCTGGGATCCGACAGCAGCGGCGAACCGAAAGAGCGA
ATGGTTAACATGCGCCGCTTTCAAATGGAAATCGAGAGACTTGTAGAATACATTCAAAAATCTCAACCGGGATCCCGAAA
ATTGGCCTTTTTGGACGGGGCGCTGGTGGCTACTTTTGCCGAAGTCTTTGAGCCAGAAAGCCAAGACTTTTATGTGCAGT
GTTTGCTCCAGCTTCTGCGGGCCAGCGAGCAAAGCCGGATCCCTATCGTGGCCTACATAGACACCACCTACACTTCCGAT
TTGGTGGCGTTGCTGAAGCATTGTTTTGACCTACCCGAAGCTCCACAGCTTCACGATGCGCAACTGCTCAGCCCCTGGTT
GGAGTGGGGGGATCGCACACCTTTTTTCATCTGTGCCCGCGGCGGCAGCCTCAACCCCCAAGATGGGATCCTCAATCGCT
ACCAAGAAATGCGAGAGCGAGTGGGATTTGTTTACCTGCGCACCAGTGACAACTTTCCGGCTCGCCTGGAAATACCCGTT
TGGGTTTATGAGGCAGGACTGTTGGACTGGTTGGTGGATCTGGTTCGCTGTGAGGTGGTGATTGGGCGAGGTTATCCTTA
TGTGCTGGAGACAGCCGATCAAATAGCCGTTATCCGCAATGAGGATCGCAACCTTTTCTTGCGTCTCATGCAAGATTGGG
CCGCTCGCGAAAAGCTGAACCTAAGGCTATCCCGGAAAACAGTAAGTAAATTACAGCGGAGACGAGTTCGATGA

Upstream 100 bases:

>100_bases
TTTGTCATCAGCCACGACGATACCTTTGAGCAAATGACAGAAAATGTTATTCGGGTGGAAAGGCACTCCGGATCCAAGTC
GGTAGGGAGGGATCCCGCCT

Downstream 100 bases:

>100_bases
GATTGGGAAAGGTAGTTCGCTCCAACAATCACTGTGATTATGTGGTGCAGGTGGACGATGCTTTAGAAGTCAAAAATCCG
CCGGCTCCTGATGACTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVFRADRILAVLQQKREAFATFDQRLSERREYYKQAMESLCQWSSLEIAEKIAPFPFPGALPTAEWDRYSNWRIPFEQEW
ANYEESRDWAKSVIENIPTFAVDGSQIYPSKDLSIPVALVQIGWYENHHCATGLYEKDIQVDVLTPRDLGSDSSGEPKER
MVNMRRFQMEIERLVEYIQKSQPGSRKLAFLDGALVATFAEVFEPESQDFYVQCLLQLLRASEQSRIPIVAYIDTTYTSD
LVALLKHCFDLPEAPQLHDAQLLSPWLEWGDRTPFFICARGGSLNPQDGILNRYQEMRERVGFVYLRTSDNFPARLEIPV
WVYEAGLLDWLVDLVRCEVVIGRGYPYVLETADQIAVIRNEDRNLFLRLMQDWAAREKLNLRLSRKTVSKLQRRRVR

Sequences:

>Translated_397_residues
MVFRADRILAVLQQKREAFATFDQRLSERREYYKQAMESLCQWSSLEIAEKIAPFPFPGALPTAEWDRYSNWRIPFEQEW
ANYEESRDWAKSVIENIPTFAVDGSQIYPSKDLSIPVALVQIGWYENHHCATGLYEKDIQVDVLTPRDLGSDSSGEPKER
MVNMRRFQMEIERLVEYIQKSQPGSRKLAFLDGALVATFAEVFEPESQDFYVQCLLQLLRASEQSRIPIVAYIDTTYTSD
LVALLKHCFDLPEAPQLHDAQLLSPWLEWGDRTPFFICARGGSLNPQDGILNRYQEMRERVGFVYLRTSDNFPARLEIPV
WVYEAGLLDWLVDLVRCEVVIGRGYPYVLETADQIAVIRNEDRNLFLRLMQDWAAREKLNLRLSRKTVSKLQRRRVR
>Mature_397_residues
MVFRADRILAVLQQKREAFATFDQRLSERREYYKQAMESLCQWSSLEIAEKIAPFPFPGALPTAEWDRYSNWRIPFEQEW
ANYEESRDWAKSVIENIPTFAVDGSQIYPSKDLSIPVALVQIGWYENHHCATGLYEKDIQVDVLTPRDLGSDSSGEPKER
MVNMRRFQMEIERLVEYIQKSQPGSRKLAFLDGALVATFAEVFEPESQDFYVQCLLQLLRASEQSRIPIVAYIDTTYTSD
LVALLKHCFDLPEAPQLHDAQLLSPWLEWGDRTPFFICARGGSLNPQDGILNRYQEMRERVGFVYLRTSDNFPARLEIPV
WVYEAGLLDWLVDLVRCEVVIGRGYPYVLETADQIAVIRNEDRNLFLRLMQDWAAREKLNLRLSRKTVSKLQRRRVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46334; Mature: 46334

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRADRILAVLQQKREAFATFDQRLSERREYYKQAMESLCQWSSLEIAEKIAPFPFPGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
LPTAEWDRYSNWRIPFEQEWANYEESRDWAKSVIENIPTFAVDGSQIYPSKDLSIPVALV
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEECCCCCCCCCEEEE
QIGWYENHHCATGLYEKDIQVDVLTPRDLGSDSSGEPKERMVNMRRFQMEIERLVEYIQK
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SQPGSRKLAFLDGALVATFAEVFEPESQDFYVQCLLQLLRASEQSRIPIVAYIDTTYTSD
CCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
LVALLKHCFDLPEAPQLHDAQLLSPWLEWGDRTPFFICARGGSLNPQDGILNRYQEMRER
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
VGFVYLRTSDNFPARLEIPVWVYEAGLLDWLVDLVRCEVVIGRGYPYVLETADQIAVIRN
CCEEEEEECCCCCEEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEC
EDRNLFLRLMQDWAAREKLNLRLSRKTVSKLQRRRVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVFRADRILAVLQQKREAFATFDQRLSERREYYKQAMESLCQWSSLEIAEKIAPFPFPGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
LPTAEWDRYSNWRIPFEQEWANYEESRDWAKSVIENIPTFAVDGSQIYPSKDLSIPVALV
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEECCCCCCCCCEEEE
QIGWYENHHCATGLYEKDIQVDVLTPRDLGSDSSGEPKERMVNMRRFQMEIERLVEYIQK
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SQPGSRKLAFLDGALVATFAEVFEPESQDFYVQCLLQLLRASEQSRIPIVAYIDTTYTSD
CCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
LVALLKHCFDLPEAPQLHDAQLLSPWLEWGDRTPFFICARGGSLNPQDGILNRYQEMRER
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
VGFVYLRTSDNFPARLEIPVWVYEAGLLDWLVDLVRCEVVIGRGYPYVLETADQIAVIRN
CCEEEEEECCCCCEEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEC
EDRNLFLRLMQDWAAREKLNLRLSRKTVSKLQRRRVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA