Click here to switch to the map view.

The map label for this gene is 86609405

Identifier: 86609405

GI number: 86609405

Start: 2044260

End: 2045837

Strand: Direct

Name: 86609405

Synonym: CYB_1949

Alternate gene names: NA

Gene position: 2044260-2045837 (Clockwise)

Preceding gene: 86609403

Following gene: 86609406

Centisome position: 67.1

GC content: 57.73

Gene sequence:

>1578_bases
ATGATCGCTCCATCTGTCGGCCCAGAAGGGGTTTGGATCCTTGCGGATCAACTCCACCCCCAGCAATCCGCCCTCGCTTC
CCTCTCGACCCTATCCCCAGACCGAGTTCCCGTCATTCTCATCGAATCTCACCGGTGGGCCAGCTCCCGCAACCACCACC
AGCAGAAACTGGTGCTGGTCTGGTCGGCCATGCGTCACTTTGCCCAAGAACTGCAACAGCGGGGCTACCCGGTCACCTAC
GTGGAAGCCGACAGCTATGCCGAGCCCCTGCAAACCTGGGCCAAGCAACATCAACTGCAGCAGATCCGCCTCATGCAGCC
CGCCGATATTCCCGTCCGAGATGAAATAGAAAAGCTGAGATCCACCCTCCCTTGCCCCCTCCTGATCTTGGAAAACAACC
ACTTCCTCTGGACAGCTGATCAATTTATCGAGTGGGCCTCAGGCCGCAAGCGCCTGCTTCTGGAAGACTTTTACCGCGAA
GGGCGAAGACGCTTCCGCATTCTCATGGATGGCCCCAAGCCCCTGGGCGGGCGCTGGAACTACGACCGGGAGAACCGCCA
TCCTCCCAAACCGGGAATGCGCTATCCTCGGCCCCTCACCTTTTCCCCCGATGCCATTACCCAGGCTGTCATCGCAAAAG
TTAGGCAACACTACGGCCATCACTTCGGATCCTTAGAAGGATTTGGCTGGGCCGTCACCCGCGCCCAAGCCCTGCAAGTG
CTTGATCATTTCATTCACGAGCGCTTGCCCCACTTCGGCCCCTGGCAAGACGCCATGCAAGCCGGGGAAGACTTCCTTTT
CCACTCGCTGCTTTCTCCCTACCTCAACTTGGGCCTGCTCACCCCCCACGAAGTCATCGCTGCCGTCGAACAAGCCTACC
ATCGCGGCGGGATCCCCCTGCCCTCCGCCGAAGGCTTCATCCGCCAGATCCTGGGCTGGCGGGAGTACATGCGCGGCTTC
TACGAATACCAGATGCCCAACGGCTATGCCCAGAACAACTTTTTTGGCCACCAGCGACCCCTGCCAGAGTTTTTTTGGAC
GGGCAAAACCGACATGGCCTGTCTGCAGCACACCCTGGATCAAATTCGCCGTCATGGTTATGCCCACCACATCCAGCGGC
TAATGGTGCTCAGCAATTTCGCCCTCATCAGTGGCATTCAGCCCCAGGCAGTAGAAGCGTGGTTTCAGGATGTGTTTATC
GACAGCTACGACTGGGTGATGCAGCCCAACGTCATCGGCATGGGCCTTTTTGCCGATGGGGGCATGCTCTCCACCAAACC
CTATGCCGCCTCTGCTCAGTACATCCGCAAAATGAGTGACTACTGCCGCCATTGCCGCTACAATCCCAGCGAAAAGGTTG
GCAAACAAGCCTGCCCCATCAATACGTTGTATTGGGACTTCCTGTTGCGTCAGCGATCCCTCTTAGCCCCCTTGGGCAGA
ATGAAATGGGTATTGATCCATTTGGATCGCATGGAACCGGAGCTAAAGGCCCAGATCCAGGCGCAAGCCGCTGCTTGGTG
GGATCCCTTGCAATCTGCACTCGACGAACAGAGTCCATCTCATTTGCAATCTGTCTAA

Upstream 100 bases:

>100_bases
GGGATCCCTTGCAACTGCCACCTGGCCTTGCCCCCCAGAGCTAAACTCAACCTGTGTCATTCTCAGCGCTCCTCCCACAG
ACCGAGAGCTTCAGCATCCC

Downstream 100 bases:

>100_bases
GCACCAGAAGATTAAGCATCCGGTAAAATTGAGGCACCCTCCTACCCACCTGTCGCTTTGTAAGGACTGCAAGCCATGAA
ATGTCCCCGCTGCAGCAAAC

Product: deoxyribodipyrimidine photolyase family protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MIAPSVGPEGVWILADQLHPQQSALASLSTLSPDRVPVILIESHRWASSRNHHQQKLVLVWSAMRHFAQELQQRGYPVTY
VEADSYAEPLQTWAKQHQLQQIRLMQPADIPVRDEIEKLRSTLPCPLLILENNHFLWTADQFIEWASGRKRLLLEDFYRE
GRRRFRILMDGPKPLGGRWNYDRENRHPPKPGMRYPRPLTFSPDAITQAVIAKVRQHYGHHFGSLEGFGWAVTRAQALQV
LDHFIHERLPHFGPWQDAMQAGEDFLFHSLLSPYLNLGLLTPHEVIAAVEQAYHRGGIPLPSAEGFIRQILGWREYMRGF
YEYQMPNGYAQNNFFGHQRPLPEFFWTGKTDMACLQHTLDQIRRHGYAHHIQRLMVLSNFALISGIQPQAVEAWFQDVFI
DSYDWVMQPNVIGMGLFADGGMLSTKPYAASAQYIRKMSDYCRHCRYNPSEKVGKQACPINTLYWDFLLRQRSLLAPLGR
MKWVLIHLDRMEPELKAQIQAQAAAWWDPLQSALDEQSPSHLQSV

Sequences:

>Translated_525_residues
MIAPSVGPEGVWILADQLHPQQSALASLSTLSPDRVPVILIESHRWASSRNHHQQKLVLVWSAMRHFAQELQQRGYPVTY
VEADSYAEPLQTWAKQHQLQQIRLMQPADIPVRDEIEKLRSTLPCPLLILENNHFLWTADQFIEWASGRKRLLLEDFYRE
GRRRFRILMDGPKPLGGRWNYDRENRHPPKPGMRYPRPLTFSPDAITQAVIAKVRQHYGHHFGSLEGFGWAVTRAQALQV
LDHFIHERLPHFGPWQDAMQAGEDFLFHSLLSPYLNLGLLTPHEVIAAVEQAYHRGGIPLPSAEGFIRQILGWREYMRGF
YEYQMPNGYAQNNFFGHQRPLPEFFWTGKTDMACLQHTLDQIRRHGYAHHIQRLMVLSNFALISGIQPQAVEAWFQDVFI
DSYDWVMQPNVIGMGLFADGGMLSTKPYAASAQYIRKMSDYCRHCRYNPSEKVGKQACPINTLYWDFLLRQRSLLAPLGR
MKWVLIHLDRMEPELKAQIQAQAAAWWDPLQSALDEQSPSHLQSV
>Mature_525_residues
MIAPSVGPEGVWILADQLHPQQSALASLSTLSPDRVPVILIESHRWASSRNHHQQKLVLVWSAMRHFAQELQQRGYPVTY
VEADSYAEPLQTWAKQHQLQQIRLMQPADIPVRDEIEKLRSTLPCPLLILENNHFLWTADQFIEWASGRKRLLLEDFYRE
GRRRFRILMDGPKPLGGRWNYDRENRHPPKPGMRYPRPLTFSPDAITQAVIAKVRQHYGHHFGSLEGFGWAVTRAQALQV
LDHFIHERLPHFGPWQDAMQAGEDFLFHSLLSPYLNLGLLTPHEVIAAVEQAYHRGGIPLPSAEGFIRQILGWREYMRGF
YEYQMPNGYAQNNFFGHQRPLPEFFWTGKTDMACLQHTLDQIRRHGYAHHIQRLMVLSNFALISGIQPQAVEAWFQDVFI
DSYDWVMQPNVIGMGLFADGGMLSTKPYAASAQYIRKMSDYCRHCRYNPSEKVGKQACPINTLYWDFLLRQRSLLAPLGR
MKWVLIHLDRMEPELKAQIQAQAAAWWDPLQSALDEQSPSHLQSV

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60791; Mature: 60791

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPSVGPEGVWILADQLHPQQSALASLSTLSPDRVPVILIESHRWASSRNHHQQKLVLV
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
WSAMRHFAQELQQRGYPVTYVEADSYAEPLQTWAKQHQLQQIRLMQPADIPVRDEIEKLR
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
STLPCPLLILENNHFLWTADQFIEWASGRKRLLLEDFYREGRRRFRILMDGPKPLGGRWN
HCCCCCEEEEECCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCC
YDRENRHPPKPGMRYPRPLTFSPDAITQAVIAKVRQHYGHHFGSLEGFGWAVTRAQALQV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LDHFIHERLPHFGPWQDAMQAGEDFLFHSLLSPYLNLGLLTPHEVIAAVEQAYHRGGIPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PSAEGFIRQILGWREYMRGFYEYQMPNGYAQNNFFGHQRPLPEFFWTGKTDMACLQHTLD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
QIRRHGYAHHIQRLMVLSNFALISGIQPQAVEAWFQDVFIDSYDWVMQPNVIGMGLFADG
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCC
GMLSTKPYAASAQYIRKMSDYCRHCRYNPSEKVGKQACPINTLYWDFLLRQRSLLAPLGR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MKWVLIHLDRMEPELKAQIQAQAAAWWDPLQSALDEQSPSHLQSV
HEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MIAPSVGPEGVWILADQLHPQQSALASLSTLSPDRVPVILIESHRWASSRNHHQQKLVLV
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
WSAMRHFAQELQQRGYPVTYVEADSYAEPLQTWAKQHQLQQIRLMQPADIPVRDEIEKLR
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
STLPCPLLILENNHFLWTADQFIEWASGRKRLLLEDFYREGRRRFRILMDGPKPLGGRWN
HCCCCCEEEEECCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCC
YDRENRHPPKPGMRYPRPLTFSPDAITQAVIAKVRQHYGHHFGSLEGFGWAVTRAQALQV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LDHFIHERLPHFGPWQDAMQAGEDFLFHSLLSPYLNLGLLTPHEVIAAVEQAYHRGGIPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PSAEGFIRQILGWREYMRGFYEYQMPNGYAQNNFFGHQRPLPEFFWTGKTDMACLQHTLD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
QIRRHGYAHHIQRLMVLSNFALISGIQPQAVEAWFQDVFIDSYDWVMQPNVIGMGLFADG
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCC
GMLSTKPYAASAQYIRKMSDYCRHCRYNPSEKVGKQACPINTLYWDFLLRQRSLLAPLGR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MKWVLIHLDRMEPELKAQIQAQAAAWWDPLQSALDEQSPSHLQSV
HEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA