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The map label for this gene is yfbG [C]

Identifier: 86609385

GI number: 86609385

Start: 2012676

End: 2013623

Strand: Reverse

Name: yfbG [C]

Synonym: CYB_1929

Alternate gene names: 86609385

Gene position: 2013623-2012676 (Counterclockwise)

Preceding gene: 86609386

Following gene: 86609383

Centisome position: 66.09

GC content: 62.13

Gene sequence:

>948_bases
ATGAAGATCCTGGTTACAGGTGGCCTGGGATTTATTGGATCCCACTTGGTAACCCGCCTTCTGCAAGAAGGCCACTGGGT
CATTTGTCTGGATAACGGCTACACGGGCCGGCAGCTCAATGTCCAGGCCCATCTGGACAACCCCGCCTTTCAGCTCATCT
GGCACGACGTGGCGGATCCCTTGCCGCCCGCTTTGGCAGAGGCTGGGATCCAGCAGATCTACCACCTGGCCTGCCCCGCT
TCTCCCCCCCACTACCAAGCGGATCCCATCCGCACCATCCGCACCAGCCTCTGGGGCACCTACCACCTGCTGCAACTGGC
CCAGAAAACGGGAGCGAGGTTCCTGCTGGCCTCGACTTCAGAAGTGTACGGGGATCCCCAAGTGCATCCCCAACCGGAAG
ACTACTGGGGCCACGTCAACCCCATCGGCCCGCGGGCCTGCTACGACGAATCCAAGCGCTTGGCGGAAACCCTCACCTTC
GACTGGCAGCGGCAATACCAGACGGAGATCCGGGTGGCCCGCATCTTCAACACCTACGGCCCTGCCATGCGGGAGGACGA
TGGCCGCGTGGTGAGCAACTTTATCGTCCAGGCCCTGCGCGGGGATCCCCTGACGGTCTATGGGGATGGATCCCAGACCC
GCAGCTTTTGCTACATCTCCGACCTGGTGGAAGGCTTGATCCGGCTGATGAACAGCCCCTACCCCGGACCCTTTAACTTG
GGCAACCCAGAGGAGTTCACCATCCTGGAGCTGGCCCAGCAGGTGCTCGCCCTCACCGGCAGCCCTTCTCCCATCGTTTA
CCGGCCTCTGCCGACGGACGATCCCAGACAACGGCAGCCGGATATTGGCAAAGCCCGCGCCCTCTTGGGGTGGGAACCTC
GGATCCCTTTGCAGGTTGGGCTGCAACAGACCATCCCTTACTTTCGTCAGCGGCTGGGGCTGGACTAA

Upstream 100 bases:

>100_bases
CATCGATGGCCGTAACTGTCTGGATCGGGAGGCAGTGCGGCAGGCGGGCATAACCCTCATCGGAGTGGGCTGGTAGGCGC
TGGGGAAATCAGGGGAAATC

Downstream 100 bases:

>100_bases
TCATCAGGTGCTCCCGACAACCCCAACCCGTTTGAGAACCATTTTCGCCTCAGCTCGATTGACCTGGGTGAATGGCTGCC
AGCGGCTCCAGTTGGCGGGC

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKILVTGGLGFIGSHLVTRLLQEGHWVICLDNGYTGRQLNVQAHLDNPAFQLIWHDVADPLPPALAEAGIQQIYHLACPA
SPPHYQADPIRTIRTSLWGTYHLLQLAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQYQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGLIRLMNSPYPGPFNL
GNPEEFTILELAQQVLALTGSPSPIVYRPLPTDDPRQRQPDIGKARALLGWEPRIPLQVGLQQTIPYFRQRLGLD

Sequences:

>Translated_315_residues
MKILVTGGLGFIGSHLVTRLLQEGHWVICLDNGYTGRQLNVQAHLDNPAFQLIWHDVADPLPPALAEAGIQQIYHLACPA
SPPHYQADPIRTIRTSLWGTYHLLQLAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQYQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGLIRLMNSPYPGPFNL
GNPEEFTILELAQQVLALTGSPSPIVYRPLPTDDPRQRQPDIGKARALLGWEPRIPLQVGLQQTIPYFRQRLGLD
>Mature_315_residues
MKILVTGGLGFIGSHLVTRLLQEGHWVICLDNGYTGRQLNVQAHLDNPAFQLIWHDVADPLPPALAEAGIQQIYHLACPA
SPPHYQADPIRTIRTSLWGTYHLLQLAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQYQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGLIRLMNSPYPGPFNL
GNPEEFTILELAQQVLALTGSPSPIVYRPLPTDDPRQRQPDIGKARALLGWEPRIPLQVGLQQTIPYFRQRLGLD

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=311, Percent_Identity=59.1639871382637, Blast_Score=392, Evalue=1e-109,
Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=26.4437689969605, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI56237023, Length=329, Percent_Identity=25.2279635258359, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI56118217, Length=329, Percent_Identity=25.2279635258359, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI189083684, Length=329, Percent_Identity=25.2279635258359, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1788589, Length=345, Percent_Identity=27.536231884058, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI48994969, Length=334, Percent_Identity=28.1437125748503, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788353, Length=346, Percent_Identity=28.0346820809249, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1786974, Length=330, Percent_Identity=27.2727272727273, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788366, Length=350, Percent_Identity=25.1428571428571, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=312, Percent_Identity=55.1282051282051, Blast_Score=363, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI17568069, Length=326, Percent_Identity=27.6073619631902, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI115532424, Length=326, Percent_Identity=26.3803680981595, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71982035, Length=335, Percent_Identity=26.2686567164179, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71982038, Length=337, Percent_Identity=26.1127596439169, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17507723, Length=337, Percent_Identity=25.2225519287834, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI133901786, Length=337, Percent_Identity=24.0356083086053, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17539424, Length=337, Percent_Identity=24.0356083086053, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI133901790, Length=337, Percent_Identity=24.0356083086053, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI133901788, Length=337, Percent_Identity=24.0356083086053, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17539422, Length=337, Percent_Identity=24.0356083086053, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21356223, Length=312, Percent_Identity=58.3333333333333, Blast_Score=383, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35403; Mature: 35403

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTGGLGFIGSHLVTRLLQEGHWVICLDNGYTGRQLNVQAHLDNPAFQLIWHDVADP
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCC
LPPALAEAGIQQIYHLACPASPPHYQADPIRTIRTSLWGTYHLLQLAQKTGARFLLASTS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCH
EVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQYQTEIRVARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGLIRLMNSPYPGPFNL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GNPEEFTILELAQQVLALTGSPSPIVYRPLPTDDPRQRQPDIGKARALLGWEPRIPLQVG
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHC
LQQTIPYFRQRLGLD
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILVTGGLGFIGSHLVTRLLQEGHWVICLDNGYTGRQLNVQAHLDNPAFQLIWHDVADP
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCC
LPPALAEAGIQQIYHLACPASPPHYQADPIRTIRTSLWGTYHLLQLAQKTGARFLLASTS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCH
EVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQYQTEIRVARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGLIRLMNSPYPGPFNL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GNPEEFTILELAQQVLALTGSPSPIVYRPLPTDDPRQRQPDIGKARALLGWEPRIPLQVG
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHC
LQQTIPYFRQRLGLD
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]