| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ag45 [H]
Identifier: 86609359
GI number: 86609359
Start: 1988656
End: 1989891
Strand: Direct
Name: ag45 [H]
Synonym: CYB_1903
Alternate gene names: 86609359
Gene position: 1988656-1989891 (Clockwise)
Preceding gene: 86609357
Following gene: 86609360
Centisome position: 65.27
GC content: 59.63
Gene sequence:
>1236_bases GTGCAGGGGCTGTCTTGGTTGGTGTTGGGTTTGAGCTATGTCGGGTTGGGACTGGGATCCCTGCCTAGGTTGCGTATGAA CCGGGCCACCATCGCCCTGGTGGGATCCGCCCTGTTGATTGGCTTGGGGACCTTGTCGCTACGGCAGGCTTGGGAAGCCA TTGACCCGACCACGATTGTGTTTCTCCTGAGCATGATGGTGGTAAATGCCAGCTTGTCCTATGGGGGGGCTTTTCAGTTG GCTTTGCTGGGCTTGATTCGGGTGAGCCGCAGCCCCTTTGGTCTGTTGATCATGCTGGTGTTCGGCAGCGGGCTGCTCTC GGCTTTCCTGCTCAACGACACGCTGGCGCTGGTATTCACCCCCCTAACTTTGCAAGTCACAACGGTGTTGGGGTTAAACC CGATCCCCTACCTGCTGGGCTTGGCGGCAGCCACCAACCTGGGATCCGTCGCCACCCTGAGCGGCAACCCGCAGAATATC CTGATCGGCTCCTTCTCTGGGATCGGCTACCTGGAGTTTGCTGCCCAGATGACCCCCATTGCCGTGGTGGGGCTGCTGCT GGAAGTGGGGTTGCTGTGGCTGTACTACCCTGAGGTGCGCTCGTTGAAACCCTTTGCTCGGGTGCCTTGGCTGCCGCTGC GGCTCTACCCGCCCCTGTTGCGCAAGAGCGTGGTGATTACGGGGGGGCTGTTTGTGGCCTTTGTAGCCGGACTTCCCTTG GCAGAATCGGCCTTGGTGGCGGCAGCCCTGTTGTTGATTACCCGCAGGCTGAAGCCGGAGCGATTTTTGGGGCAGGTGGA CTGGAATCTGCTGGTGATGTTTTCCGGGCTATTTATCCTGACGCGGGCAACGGGAGAGCTGGTAACTGTTTGGGGGATGA GCTTGGGATCCTTGGCAGAGAGTCTGGCGGGATCCCCTCTTGCCCTGCTGAGTAGTGTGGCCGTTTTATCCAACCTCATC TCCAATGTGCCGGCGGTGCTGTTGCTGCAATCGTTCCTGCCTCGGCAGGAGACCACCGCTTGGCTGTTGCTGGCTGCCGG CTCCACTTTGGCGGGCAATTTGACTCTATTTGGGGCGGTGGCCAATCTGATCACGGTTGAGGCAGCGGCCAAAAAAGGCT ACGTGCTCTCGTTTGGGGAACATCTGCGCTTTGGCCTGCCCCTCACTCTCCTAACCCTGGGGTTCAGTGGGTTGTGGCTG TGCCAGCCTTTCCTGTCTTCTCCACCGCTCAGATGA
Upstream 100 bases:
>100_bases TTCATTGAGTATCGGGAATGTTGGGCCTGTTTCAACTCCAGCCTTTGCCATTGGCTGAACCCATCAGGGATCCTGAAAGA AGTGCGGGAGGGATCGGGGG
Downstream 100 bases:
>100_bases CCTCTGTCGAGGGATCCAGTGGGGCTGTGACTGGCTTGTCGGGATCCCTGTGTATGATGGGAAAAAGAGTTTAAGAAACG TAACGTGTCTTCTCCGCTAT
Product: arsenite-antimonite (ArsAB) efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MQGLSWLVLGLSYVGLGLGSLPRLRMNRATIALVGSALLIGLGTLSLRQAWEAIDPTTIVFLLSMMVVNASLSYGGAFQL ALLGLIRVSRSPFGLLIMLVFGSGLLSAFLLNDTLALVFTPLTLQVTTVLGLNPIPYLLGLAAATNLGSVATLSGNPQNI LIGSFSGIGYLEFAAQMTPIAVVGLLLEVGLLWLYYPEVRSLKPFARVPWLPLRLYPPLLRKSVVITGGLFVAFVAGLPL AESALVAAALLLITRRLKPERFLGQVDWNLLVMFSGLFILTRATGELVTVWGMSLGSLAESLAGSPLALLSSVAVLSNLI SNVPAVLLLQSFLPRQETTAWLLLAAGSTLAGNLTLFGAVANLITVEAAAKKGYVLSFGEHLRFGLPLTLLTLGFSGLWL CQPFLSSPPLR
Sequences:
>Translated_411_residues MQGLSWLVLGLSYVGLGLGSLPRLRMNRATIALVGSALLIGLGTLSLRQAWEAIDPTTIVFLLSMMVVNASLSYGGAFQL ALLGLIRVSRSPFGLLIMLVFGSGLLSAFLLNDTLALVFTPLTLQVTTVLGLNPIPYLLGLAAATNLGSVATLSGNPQNI LIGSFSGIGYLEFAAQMTPIAVVGLLLEVGLLWLYYPEVRSLKPFARVPWLPLRLYPPLLRKSVVITGGLFVAFVAGLPL AESALVAAALLLITRRLKPERFLGQVDWNLLVMFSGLFILTRATGELVTVWGMSLGSLAESLAGSPLALLSSVAVLSNLI SNVPAVLLLQSFLPRQETTAWLLLAAGSTLAGNLTLFGAVANLITVEAAAKKGYVLSFGEHLRFGLPLTLLTLGFSGLWL CQPFLSSPPLR >Mature_411_residues MQGLSWLVLGLSYVGLGLGSLPRLRMNRATIALVGSALLIGLGTLSLRQAWEAIDPTTIVFLLSMMVVNASLSYGGAFQL ALLGLIRVSRSPFGLLIMLVFGSGLLSAFLLNDTLALVFTPLTLQVTTVLGLNPIPYLLGLAAATNLGSVATLSGNPQNI LIGSFSGIGYLEFAAQMTPIAVVGLLLEVGLLWLYYPEVRSLKPFARVPWLPLRLYPPLLRKSVVITGGLFVAFVAGLPL AESALVAAALLLITRRLKPERFLGQVDWNLLVMFSGLFILTRATGELVTVWGMSLGSLAESLAGSPLALLSSVAVLSNLI SNVPAVLLLQSFLPRQETTAWLLLAAGSTLAGNLTLFGAVANLITVEAAAKKGYVLSFGEHLRFGLPLTLLTLGFSGLWL CQPFLSSPPLR
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=138, Percent_Identity=36.231884057971, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1787039, Length=350, Percent_Identity=30, Blast_Score=93, Evalue=3e-20, Organism=Drosophila melanogaster, GI24581759, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574683, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574681, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574685, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574678, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI19920704, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 43564; Mature: 43564
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLSWLVLGLSYVGLGLGSLPRLRMNRATIALVGSALLIGLGTLSLRQAWEAIDPTTIV CCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FLLSMMVVNASLSYGGAFQLALLGLIRVSRSPFGLLIMLVFGSGLLSAFLLNDTLALVFT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEE PLTLQVTTVLGLNPIPYLLGLAAATNLGSVATLSGNPQNILIGSFSGIGYLEFAAQMTPI CHHEEEEHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHH AVVGLLLEVGLLWLYYPEVRSLKPFARVPWLPLRLYPPLLRKSVVITGGLFVAFVAGLPL HHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCHHCCCHHHHCCCEEECHHHHHHHHCCCC AESALVAAALLLITRRLKPERFLGQVDWNLLVMFSGLFILTRATGELVTVWGMSLGSLAE HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHH SLAGSPLALLSSVAVLSNLISNVPAVLLLQSFLPRQETTAWLLLAAGSTLAGNLTLFGAV HHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHH ANLITVEAAAKKGYVLSFGEHLRFGLPLTLLTLGFSGLWLCQPFLSSPPLR HHHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MQGLSWLVLGLSYVGLGLGSLPRLRMNRATIALVGSALLIGLGTLSLRQAWEAIDPTTIV CCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FLLSMMVVNASLSYGGAFQLALLGLIRVSRSPFGLLIMLVFGSGLLSAFLLNDTLALVFT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEE PLTLQVTTVLGLNPIPYLLGLAAATNLGSVATLSGNPQNILIGSFSGIGYLEFAAQMTPI CHHEEEEHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHH AVVGLLLEVGLLWLYYPEVRSLKPFARVPWLPLRLYPPLLRKSVVITGGLFVAFVAGLPL HHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCHHCCCHHHHCCCEEECHHHHHHHHCCCC AESALVAAALLLITRRLKPERFLGQVDWNLLVMFSGLFILTRATGELVTVWGMSLGSLAE HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHH SLAGSPLALLSSVAVLSNLISNVPAVLLLQSFLPRQETTAWLLLAAGSTLAGNLTLFGAV HHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHH ANLITVEAAAKKGYVLSFGEHLRFGLPLTLLTLGFSGLWLCQPFLSSPPLR HHHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]