| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609350
Identifier: 86609350
GI number: 86609350
Start: 1979708
End: 1980988
Strand: Reverse
Name: 86609350
Synonym: CYB_1894
Alternate gene names: NA
Gene position: 1980988-1979708 (Counterclockwise)
Preceding gene: 86609351
Following gene: 86609349
Centisome position: 65.02
GC content: 61.44
Gene sequence:
>1281_bases ATGACCAGAGCAAGGGAGAGGAAAGGCACCGATCCATCCGCGCTAGCGGGCCGTAGGCCTTTGCCAGAGAAGTCGCGGGA TCCCCGCCGCCCTCCACAACCTGCCAAGAACGCCGTCCCGCCTCCAGAGGGGTCAAAGCCGCAAACAGGTTCTGGTCGCC TGCTTCCTGCCCCTAGGGGATCCCTATTGGTTTCCCGTCCTCAACCGCTGCGTCTTGCCCGCCAAAAAGCCATTGCTCGT CTGCGCCAACGGGCTGCCCGGCCTCGCCGCTTGAGACGTTCTCCATCTCTCGGGCAAGTGTTGCTCAGGGGACTAAGCTT AAGTCTTATCCTGGGCCTGACGATGGCGGGCCTCTCGCAACTGCTGCAATCGACCACCGCTGGCCGGACAGAACAGTCCA CGACGCAGCTTGGGGATCCTCCCCCGTCGGCATTCCCGAGTAACATTCTGCCGGGAGAAGCGATCCCGGCTTTGCAGGAG CGCTTGGCCGCTTTGGCCGACCAACCGGGCTTGACGGCAGGGGCTCTGTTCTGGGAGGTGGAAACTGGCGCCTTTGCCGG GGTTAGGCCGGATCAGGCTTTTCCTGCCGCCAGTGTGATTAAGATCCCCATTCTCTTGGCTTTTTTCCAGGCTGTGGAAA CCGGACAGGTGCGGCTGGATGAACAGCTCACTCTGCGGGAAGATCTCAAGGGAGGGGGAGCTGGTGTGTTGCAAACCCGA CCCCTCGGATCCCAGGTTTCTGCTTTGGAAGCGGCCACCCTGATGATCACCCTCAGCGACAACTTCGCCACCAATCTGAT CATCGATCGCCTGGGTGGACAGGAGACTCTCAACCAAAAATTTCGCCAGTGGGGACTACAACACACGCAAATTTCTTGGT GGCTACCGGATCTGGAGGGCACCAACACCAGCAGCCCGCGCGACATGGTTTGGTTGCTCAGCCAGGTGGAACAGGGGCGC ATGTTGAACCGCCGCAGCCGCGACCGCTTTTTGGATATTCTCTGGCGCACCCAACGGCTCTCCTACTTCCGGCCCAATCT GGGCCAAGAGGTGCGCATTGCCCACAAAACGGGAACCCTGGGCTCCGTGGTGGGAGATGCCGGGATCCTGGATTTGCCCA ACGGGCGGCGCTATGTGGCGGCGGTGTGGGTGAAGCGAGAAACCCCCAACGACCCCAGAGCCGAAGGGCTGATCGCCAGC CTGTCGCAAGCAGCCTACGAGTTCTGGTCTGCTCCCGAGGATCCAACGGCCAAGGACTCCATGGGCAGCCTGGAACGCTA A
Upstream 100 bases:
>100_bases GGGTTTAATGTGGGTTTAATTAAGCCAAGCTCACCGGAGTGGAGTCGGTGAAACTGCCAGCAGTGTCTGTCAGAAGTATG GTGTTAAGGCAATCGTTCTT
Downstream 100 bases:
>100_bases GTCTTCCACTCCACAAATCTTTCCATATTGCTACGCAACGCTTACGCGAACGCAGTAGCAGTGCGGAGCACTATTCCAGG CAGAGCGCAAATGCCAGAGT
Product: carboxylesterase
Products: NA
Alternate protein names: Penicillinase [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTRARERKGTDPSALAGRRPLPEKSRDPRRPPQPAKNAVPPPEGSKPQTGSGRLLPAPRGSLLVSRPQPLRLARQKAIAR LRQRAARPRRLRRSPSLGQVLLRGLSLSLILGLTMAGLSQLLQSTTAGRTEQSTTQLGDPPPSAFPSNILPGEAIPALQE RLAALADQPGLTAGALFWEVETGAFAGVRPDQAFPAASVIKIPILLAFFQAVETGQVRLDEQLTLREDLKGGGAGVLQTR PLGSQVSALEAATLMITLSDNFATNLIIDRLGGQETLNQKFRQWGLQHTQISWWLPDLEGTNTSSPRDMVWLLSQVEQGR MLNRRSRDRFLDILWRTQRLSYFRPNLGQEVRIAHKTGTLGSVVGDAGILDLPNGRRYVAAVWVKRETPNDPRAEGLIAS LSQAAYEFWSAPEDPTAKDSMGSLER
Sequences:
>Translated_426_residues MTRARERKGTDPSALAGRRPLPEKSRDPRRPPQPAKNAVPPPEGSKPQTGSGRLLPAPRGSLLVSRPQPLRLARQKAIAR LRQRAARPRRLRRSPSLGQVLLRGLSLSLILGLTMAGLSQLLQSTTAGRTEQSTTQLGDPPPSAFPSNILPGEAIPALQE RLAALADQPGLTAGALFWEVETGAFAGVRPDQAFPAASVIKIPILLAFFQAVETGQVRLDEQLTLREDLKGGGAGVLQTR PLGSQVSALEAATLMITLSDNFATNLIIDRLGGQETLNQKFRQWGLQHTQISWWLPDLEGTNTSSPRDMVWLLSQVEQGR MLNRRSRDRFLDILWRTQRLSYFRPNLGQEVRIAHKTGTLGSVVGDAGILDLPNGRRYVAAVWVKRETPNDPRAEGLIAS LSQAAYEFWSAPEDPTAKDSMGSLER >Mature_425_residues TRARERKGTDPSALAGRRPLPEKSRDPRRPPQPAKNAVPPPEGSKPQTGSGRLLPAPRGSLLVSRPQPLRLARQKAIARL RQRAARPRRLRRSPSLGQVLLRGLSLSLILGLTMAGLSQLLQSTTAGRTEQSTTQLGDPPPSAFPSNILPGEAIPALQER LAALADQPGLTAGALFWEVETGAFAGVRPDQAFPAASVIKIPILLAFFQAVETGQVRLDEQLTLREDLKGGGAGVLQTRP LGSQVSALEAATLMITLSDNFATNLIIDRLGGQETLNQKFRQWGLQHTQISWWLPDLEGTNTSSPRDMVWLLSQVEQGRM LNRRSRDRFLDILWRTQRLSYFRPNLGQEVRIAHKTGTLGSVVGDAGILDLPNGRRYVAAVWVKRETPNDPRAEGLIASL SQAAYEFWSAPEDPTAKDSMGSLER
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 - InterPro: IPR006311 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 46608; Mature: 46477
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRARERKGTDPSALAGRRPLPEKSRDPRRPPQPAKNAVPPPEGSKPQTGSGRLLPAPRG CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLLVSRPQPLRLARQKAIARLRQRAARPRRLRRSPSLGQVLLRGLSLSLILGLTMAGLSQ CEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLQSTTAGRTEQSTTQLGDPPPSAFPSNILPGEAIPALQERLAALADQPGLTAGALFWEV HHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE ETGAFAGVRPDQAFPAASVIKIPILLAFFQAVETGQVRLDEQLTLREDLKGGGAGVLQTR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCCEEEEC PLGSQVSALEAATLMITLSDNFATNLIIDRLGGQETLNQKFRQWGLQHTQISWWLPDLEG CCCCHHHHHEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCC TNTSSPRDMVWLLSQVEQGRMLNRRSRDRFLDILWRTQRLSYFRPNLGQEVRIAHKTGTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH GSVVGDAGILDLPNGRRYVAAVWVKRETPNDPRAEGLIASLSQAAYEFWSAPEDPTAKDS HHHHCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MGSLER CCCCCC >Mature Secondary Structure TRARERKGTDPSALAGRRPLPEKSRDPRRPPQPAKNAVPPPEGSKPQTGSGRLLPAPRG CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLLVSRPQPLRLARQKAIARLRQRAARPRRLRRSPSLGQVLLRGLSLSLILGLTMAGLSQ CEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLQSTTAGRTEQSTTQLGDPPPSAFPSNILPGEAIPALQERLAALADQPGLTAGALFWEV HHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE ETGAFAGVRPDQAFPAASVIKIPILLAFFQAVETGQVRLDEQLTLREDLKGGGAGVLQTR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCCEEEEC PLGSQVSALEAATLMITLSDNFATNLIIDRLGGQETLNQKFRQWGLQHTQISWWLPDLEG CCCCHHHHHEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCC TNTSSPRDMVWLLSQVEQGRMLNRRSRDRFLDILWRTQRLSYFRPNLGQEVRIAHKTGTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH GSVVGDAGILDLPNGRRYVAAVWVKRETPNDPRAEGLIASLSQAAYEFWSAPEDPTAKDS HHHHCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MGSLER CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3038538; 2822004 [H]