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The map label for this gene is sopA [C]

Identifier: 86609333

GI number: 86609333

Start: 1961940

End: 1962740

Strand: Reverse

Name: sopA [C]

Synonym: CYB_1877

Alternate gene names: 86609333

Gene position: 1962740-1961940 (Counterclockwise)

Preceding gene: 86609334

Following gene: 86609332

Centisome position: 64.42

GC content: 59.3

Gene sequence:

>801_bases
ATGTCTGGCAGAACGGCGCTTGTCATCACCGTTGCCTGTTTGAGTGGGGGATCCGGAAAGACCACAGCCGCCCTCAACCT
GGCCATCATGTTGGCCGAGCATGGCAAGACGCTGGCCGTTGACTTTGACCCACAGGGCAACCTGAGCCAGTGGATGGGCT
GGACGGATCTGTCGGAGTCGGCCACCATTGCCGAGACGATTTTGCCGGGGGCGGATCGGGTTCACATTCGGGAGATTATC
CGTCCGCCGTTGAATGAGGATCGCCAGGAGCGGCTGTGGTTGGCCCCCAGCGATTACAGTCTCTCGCGGGCTATGGATGC
GATCGTGATGGAGCCGGGGCGGGAGCTGTTTTTGAAGCGGGCTTTGCGACCGATTCTGCCGGAGTATGACTTTTTGGTCA
TCGACAGCCCCCCCTCGAAAGGGTTGCTCACCTACAACAGCATTCTCAGCGCCGATCTGCTGGTGGTGCCGACGGAATGT
ACCCAAAAGGGGGTGATGGGGGCCCTAAGTACCCTGGTGCTGTTGAAAGAATTGGAAGAGCTGGATTTTCATGTGCCCAA
GTTTTTGGGGGTGCTCCCCACACGGGAACAGTGGGTGGGCAACAACCGCACCAAAATGTCGCGGGCCGCGGTGGAAGCCT
TGGCGGAAATGATGCAAGGGATCCCCATTTTCACGCCGGTGCGGCAAAGTACAGTGGTGCAGCAAACCAACAGCATGGGC
TGGTCCTTGGCGGAGGCGGGGGAAGATCTCCTGGCCCAACCTTATCGTGAGGTCCTCAAGGCTGTGTTGGAGGCCCGCTA
A

Upstream 100 bases:

>100_bases
CTGTAGGCCATTCCCAGCGGCGGGATCCCTATCTGAAGTGTGAACACTATTGCTTAACCCTAGCTATAGTGTTAGGGGAT
GGGCTACGAGGGGATAACTC

Downstream 100 bases:

>100_bases
CATGGCTACCGCCAAGAAGCCTCCCAAAAAAAAATTGCCCACCGGCCCCACCAAGGCAGATTTGCTCTCGCGCATGGGGG
TGAATAAGCAGCCAGAGCCG

Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSGRTALVITVACLSGGSGKTTAALNLAIMLAEHGKTLAVDFDPQGNLSQWMGWTDLSESATIAETILPGADRVHIREII
RPPLNEDRQERLWLAPSDYSLSRAMDAIVMEPGRELFLKRALRPILPEYDFLVIDSPPSKGLLTYNSILSADLLVVPTEC
TQKGVMGALSTLVLLKELEELDFHVPKFLGVLPTREQWVGNNRTKMSRAAVEALAEMMQGIPIFTPVRQSTVVQQTNSMG
WSLAEAGEDLLAQPYREVLKAVLEAR

Sequences:

>Translated_266_residues
MSGRTALVITVACLSGGSGKTTAALNLAIMLAEHGKTLAVDFDPQGNLSQWMGWTDLSESATIAETILPGADRVHIREII
RPPLNEDRQERLWLAPSDYSLSRAMDAIVMEPGRELFLKRALRPILPEYDFLVIDSPPSKGLLTYNSILSADLLVVPTEC
TQKGVMGALSTLVLLKELEELDFHVPKFLGVLPTREQWVGNNRTKMSRAAVEALAEMMQGIPIFTPVRQSTVVQQTNSMG
WSLAEAGEDLLAQPYREVLKAVLEAR
>Mature_265_residues
SGRTALVITVACLSGGSGKTTAALNLAIMLAEHGKTLAVDFDPQGNLSQWMGWTDLSESATIAETILPGADRVHIREIIR
PPLNEDRQERLWLAPSDYSLSRAMDAIVMEPGRELFLKRALRPILPEYDFLVIDSPPSKGLLTYNSILSADLLVVPTECT
QKGVMGALSTLVLLKELEELDFHVPKFLGVLPTREQWVGNNRTKMSRAAVEALAEMMQGIPIFTPVRQSTVVQQTNSMGW
SLAEAGEDLLAQPYREVLKAVLEAR

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29239; Mature: 29108

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRTALVITVACLSGGSGKTTAALNLAIMLAEHGKTLAVDFDPQGNLSQWMGWTDLSES
CCCCEEEEEEEEECCCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCCC
ATIAETILPGADRVHIREIIRPPLNEDRQERLWLAPSDYSLSRAMDAIVMEPGRELFLKR
HHHHHHHCCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
ALRPILPEYDFLVIDSPPSKGLLTYNSILSADLLVVPTECTQKGVMGALSTLVLLKELEE
HHHHHCCCCCEEEEECCCCCCEEEHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
LDFHVPKFLGVLPTREQWVGNNRTKMSRAAVEALAEMMQGIPIFTPVRQSTVVQQTNSMG
HHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
WSLAEAGEDLLAQPYREVLKAVLEAR
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGRTALVITVACLSGGSGKTTAALNLAIMLAEHGKTLAVDFDPQGNLSQWMGWTDLSES
CCCEEEEEEEEECCCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCCC
ATIAETILPGADRVHIREIIRPPLNEDRQERLWLAPSDYSLSRAMDAIVMEPGRELFLKR
HHHHHHHCCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
ALRPILPEYDFLVIDSPPSKGLLTYNSILSADLLVVPTECTQKGVMGALSTLVLLKELEE
HHHHHCCCCCEEEEECCCCCCEEEHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
LDFHVPKFLGVLPTREQWVGNNRTKMSRAAVEALAEMMQGIPIFTPVRQSTVVQQTNSMG
HHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
WSLAEAGEDLLAQPYREVLKAVLEAR
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]