Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609329

Identifier: 86609329

GI number: 86609329

Start: 1956264

End: 1957358

Strand: Direct

Name: 86609329

Synonym: CYB_1873

Alternate gene names: NA

Gene position: 1956264-1957358 (Clockwise)

Preceding gene: 86609325

Following gene: 86609342

Centisome position: 64.21

GC content: 59.36

Gene sequence:

>1095_bases
ATGCTGAAGCCAAAGCATGCCTGCCGGCCCCTGCTGCCGACTTGTGGGAGCTCGGATTCCCCTATCGAAAAAGGATGCTC
TGTTGTAGCTTATACAGCCTTGGCCATTTTAGCGCTTGGCTTGGTCGGTTGCGGCGAGGGAACAACTCCTCTGGGCCCAC
TGGAAAATGTCTTTCTGCGGGCAGATGATTTTGAAATTACAGGGGGATCCCCGGCAGCGGGCGCAGTGGGGCCCTACCTA
CAGTTCAACATGCGGCGGCAGCGGGATAACCAAATCCTAAATCGCCCCCTTAATGTCTATGTGGACAATGCCGGGCTGGC
AGAAAGGCGGAATCCCCTTTTGGATAACCAAAACCGTCCTATTCTCTTACAGCGCTCGGTGGCCTTCTTGGGCAATGGGC
TGGATCTGAACAGAGATGGCCAGCCGGATCTGCCCCCCAAAGAACCCCCTAACTTCACCAGTGGCCCGCTGCTGCCCTAC
ACCCCGCCCAATCAGTGGCAAAGCCGGGCTGCCCTTGCCTATGTCCCCGGACAGGCCAATATCCCCGGACGGAGTCCCAG
CGACCGCTTTGGCATCTACTTTTCTTCCATCCTGCCCTACACCGGGCAGCTTCGCTTTCGCGCCCGCGACGAGCTGGGCA
ATGCCTTTGCCCGCACCTTTGAGGTCACCTACCCGCCGGCAGCCAGCCGCGCCACGGTCACGGTTACCTTGGCCAACCTC
ACCGCCACTGCCCAAGAGCCGGTTCTCATTGCCATTTGTAACCAGTTGGGAGCTGCTGCCGTGGTGGGCCTGCGGAGTGG
CACGTTCACCGAGCTGGTGGATCTCCTGCCGGCCCCAGGGCTGCCGGTAGATCCCACCTTGAGCGAGCCCATCCGCTATG
TGGCCGAGGCTTATCAATTTAACCGCGATCGAGCCGTCATCCGCGTTTCCCAGAATCCCACGGATCCCAGCCGCATGAGC
GTTCCTCTACTGGGATTTGAAGGGACAACCGGTCGGGCAGATCTGACGCTGGTGAACTCCGCAGGGGATCGGCTGACTTG
CTTCAACGATCGGCTTTCGGATCTGCGGGATACGTTTTCTGACTTTTTCAGATAG

Upstream 100 bases:

>100_bases
TCAGGCGAATCCGATGAGTGCAGAGGGATCCCCGCCCATCCTCAACTCAGTCCGGTTGGGTTTAACCCTCGCCAAGGTGT
CTGTTGTGGAGAGGAGATGA

Downstream 100 bases:

>100_bases
TCAATTCAAATAGCAATGAGACACTGGCCAGTAGAATAGTCCGACTCGCAAAAGCAGGCCTTGTCACTTCATCAACAGAA
GTTCCTCCATCTGCATGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MLKPKHACRPLLPTCGSSDSPIEKGCSVVAYTALAILALGLVGCGEGTTPLGPLENVFLRADDFEITGGSPAAGAVGPYL
QFNMRRQRDNQILNRPLNVYVDNAGLAERRNPLLDNQNRPILLQRSVAFLGNGLDLNRDGQPDLPPKEPPNFTSGPLLPY
TPPNQWQSRAALAYVPGQANIPGRSPSDRFGIYFSSILPYTGQLRFRARDELGNAFARTFEVTYPPAASRATVTVTLANL
TATAQEPVLIAICNQLGAAAVVGLRSGTFTELVDLLPAPGLPVDPTLSEPIRYVAEAYQFNRDRAVIRVSQNPTDPSRMS
VPLLGFEGTTGRADLTLVNSAGDRLTCFNDRLSDLRDTFSDFFR

Sequences:

>Translated_364_residues
MLKPKHACRPLLPTCGSSDSPIEKGCSVVAYTALAILALGLVGCGEGTTPLGPLENVFLRADDFEITGGSPAAGAVGPYL
QFNMRRQRDNQILNRPLNVYVDNAGLAERRNPLLDNQNRPILLQRSVAFLGNGLDLNRDGQPDLPPKEPPNFTSGPLLPY
TPPNQWQSRAALAYVPGQANIPGRSPSDRFGIYFSSILPYTGQLRFRARDELGNAFARTFEVTYPPAASRATVTVTLANL
TATAQEPVLIAICNQLGAAAVVGLRSGTFTELVDLLPAPGLPVDPTLSEPIRYVAEAYQFNRDRAVIRVSQNPTDPSRMS
VPLLGFEGTTGRADLTLVNSAGDRLTCFNDRLSDLRDTFSDFFR
>Mature_364_residues
MLKPKHACRPLLPTCGSSDSPIEKGCSVVAYTALAILALGLVGCGEGTTPLGPLENVFLRADDFEITGGSPAAGAVGPYL
QFNMRRQRDNQILNRPLNVYVDNAGLAERRNPLLDNQNRPILLQRSVAFLGNGLDLNRDGQPDLPPKEPPNFTSGPLLPY
TPPNQWQSRAALAYVPGQANIPGRSPSDRFGIYFSSILPYTGQLRFRARDELGNAFARTFEVTYPPAASRATVTVTLANL
TATAQEPVLIAICNQLGAAAVVGLRSGTFTELVDLLPAPGLPVDPTLSEPIRYVAEAYQFNRDRAVIRVSQNPTDPSRMS
VPLLGFEGTTGRADLTLVNSAGDRLTCFNDRLSDLRDTFSDFFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39399; Mature: 39399

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPKHACRPLLPTCGSSDSPIEKGCSVVAYTALAILALGLVGCGEGTTPLGPLENVFLR
CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEE
ADDFEITGGSPAAGAVGPYLQFNMRRQRDNQILNRPLNVYVDNAGLAERRNPLLDNQNRP
CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCC
ILLQRSVAFLGNGLDLNRDGQPDLPPKEPPNFTSGPLLPYTPPNQWQSRAALAYVPGQAN
EEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCC
IPGRSPSDRFGIYFSSILPYTGQLRFRARDELGNAFARTFEVTYPPAASRATVTVTLANL
CCCCCCCCCCCEEEHHHCCCCCEEEEEEHHHHHHHHHHEEEEECCCCCCCEEEEEEEEEE
TATAQEPVLIAICNQLGAAAVVGLRSGTFTELVDLLPAPGLPVDPTLSEPIRYVAEAYQF
EECCCCCEEEEEHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
NRDRAVIRVSQNPTDPSRMSVPLLGFEGTTGRADLTLVNSAGDRLTCFNDRLSDLRDTFS
CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHH
DFFR
HHCC
>Mature Secondary Structure
MLKPKHACRPLLPTCGSSDSPIEKGCSVVAYTALAILALGLVGCGEGTTPLGPLENVFLR
CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEE
ADDFEITGGSPAAGAVGPYLQFNMRRQRDNQILNRPLNVYVDNAGLAERRNPLLDNQNRP
CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCC
ILLQRSVAFLGNGLDLNRDGQPDLPPKEPPNFTSGPLLPYTPPNQWQSRAALAYVPGQAN
EEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCC
IPGRSPSDRFGIYFSSILPYTGQLRFRARDELGNAFARTFEVTYPPAASRATVTVTLANL
CCCCCCCCCCCEEEHHHCCCCCEEEEEEHHHHHHHHHHEEEEECCCCCCCEEEEEEEEEE
TATAQEPVLIAICNQLGAAAVVGLRSGTFTELVDLLPAPGLPVDPTLSEPIRYVAEAYQF
EECCCCCEEEEEHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
NRDRAVIRVSQNPTDPSRMSVPLLGFEGTTGRADLTLVNSAGDRLTCFNDRLSDLRDTFS
CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHH
DFFR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA