| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609316
Identifier: 86609316
GI number: 86609316
Start: 1942190
End: 1942297
Strand: Reverse
Name: 86609316
Synonym: CYB_1860
Alternate gene names: NA
Gene position: 1942297-1942190 (Counterclockwise)
Preceding gene: 86609319
Following gene: 86609315
Centisome position: 63.75
GC content: 50.0
Gene sequence:
>108_bases TTGGCGGCTCAGGATCCCTGCAGTTTCTTCATCGGCTGCAACTTGCTGTTACTTCTTACCCTTTTGGCCTCTGGGCTGGG ATCCCCAATTAAAGTGGACATGAGATAA
Upstream 100 bases:
>100_bases GAGGAGGTGGCGCTGAGCTGAACAGGCGAGTGGGACATAGGAGGGCAATCCGGCTAAAGATCCTTATGAATCCTGACATT GTGGCGACAGCAACCGCAAG
Downstream 100 bases:
>100_bases TGACACCTGACAAGTCTGTTGAAGAACGGCTCGACAAGGATCCCCCCATTGCCGAGTTGAGAGGAAACCCCGCTTGGTTG CCCAAACCTTTAACCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 34
Protein sequence:
>35_residues MAAQDPCSFFIGCNLLLLLTLLASGLGSPIKVDMR
Sequences:
>Translated_35_residues MAAQDPCSFFIGCNLLLLLTLLASGLGSPIKVDMR >Mature_34_residues AAQDPCSFFIGCNLLLLLTLLASGLGSPIKVDMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3710; Mature: 3578
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 11.4 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQDPCSFFIGCNLLLLLTLLASGLGSPIKVDMR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure AAQDPCSFFIGCNLLLLLTLLASGLGSPIKVDMR CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA