Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609308

Identifier: 86609308

GI number: 86609308

Start: 1936472

End: 1937302

Strand: Reverse

Name: 86609308

Synonym: CYB_1852

Alternate gene names: NA

Gene position: 1937302-1936472 (Counterclockwise)

Preceding gene: 86609312

Following gene: 86609306

Centisome position: 63.59

GC content: 55.96

Gene sequence:

>831_bases
ATGGCACCAACTTGGCAAACCGATGGGCATACTTGGTTCCTTCTGCCCCCTCAACCCCGCGCCGTCGTTCACTTTCTGGG
TGGAGCTTTTGTGGGAGCTGCCCCGCAAGTGTTCTACAGCCGCCTGCTGGAAGAACTGGCCCGTATGGGCATGGCCGTTG
TTGCCACCCCCTACACCACCGATATCGATCACGCCCAACTGGCGCTCAACGCAGCCCAATCTTTGCACAGAAGCCTGCAA
AGCAAGGGTTTGCTGGAGTTGCCTCTGTTTGGCTTGGGTCATAGCCTGGGCTGTAAGTTGCAGATCCTCTCTTGTCTAGC
CGTTCCTTCTCTGGGATCCCGTCGGCGAGGCAATATTTTTCTGGCCTACAGCAATGCCGGGTTGGATCGGGCTTTGCCAT
TGCTGCGGCTGTTGACCCAAGCTTGGCCTCAACAACAGCTCGCCGATCTGTGGCGGATGTGGATGGGATCCTCCTCGCCG
CCTGTGAACCTGTGGTTGGAGTTCGAGCCTTCCCCGACAGAAACCAACCGCTTAATTGAGGAGCAGTATCCGGTTAGAAA
CAACCTGCTTGTGGAATTTCGACAGGATGATATTGACGACATTCCTCTGCTCTACCAGCAGCTTTGCCGCAAGTATCAAG
GCCACACCGAGTGGCAGCATCTCGAGGGGGATCACCTCACTCCACTGGGTTTTAGCTATCCTTTCCAAGTCGGGGAGGAG
TTCAGCCCCATCGATGCTTTTGGACAGTTGATCTACCAGAACCTACTGGCCCCCAACCACCAAATGATCCGAAGCATCCG
AGCCTGGCTGGCAACCCAATTGGCCCATTGA

Upstream 100 bases:

>100_bases
AGGGGCTGGCCAGCGCAGGGAACCGGCGTGAGGTGGGCAAGTGGGATCTGCCGGGTTGTGGGAAAAGCTCCAACAAAATC
GCAGGCGAGGTTGCAACACC

Downstream 100 bases:

>100_bases
CATTCTTCCCACGGCTCAAGTCAACGGATTTTTTCACAGCTTGCAGGATTTCTCCCGCTCACTGTTGGCAAGCGGGCGGC
AGGTCTTGCTACTCCATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAPTWQTDGHTWFLLPPQPRAVVHFLGGAFVGAAPQVFYSRLLEELARMGMAVVATPYTTDIDHAQLALNAAQSLHRSLQ
SKGLLELPLFGLGHSLGCKLQILSCLAVPSLGSRRRGNIFLAYSNAGLDRALPLLRLLTQAWPQQQLADLWRMWMGSSSP
PVNLWLEFEPSPTETNRLIEEQYPVRNNLLVEFRQDDIDDIPLLYQQLCRKYQGHTEWQHLEGDHLTPLGFSYPFQVGEE
FSPIDAFGQLIYQNLLAPNHQMIRSIRAWLATQLAH

Sequences:

>Translated_276_residues
MAPTWQTDGHTWFLLPPQPRAVVHFLGGAFVGAAPQVFYSRLLEELARMGMAVVATPYTTDIDHAQLALNAAQSLHRSLQ
SKGLLELPLFGLGHSLGCKLQILSCLAVPSLGSRRRGNIFLAYSNAGLDRALPLLRLLTQAWPQQQLADLWRMWMGSSSP
PVNLWLEFEPSPTETNRLIEEQYPVRNNLLVEFRQDDIDDIPLLYQQLCRKYQGHTEWQHLEGDHLTPLGFSYPFQVGEE
FSPIDAFGQLIYQNLLAPNHQMIRSIRAWLATQLAH
>Mature_275_residues
APTWQTDGHTWFLLPPQPRAVVHFLGGAFVGAAPQVFYSRLLEELARMGMAVVATPYTTDIDHAQLALNAAQSLHRSLQS
KGLLELPLFGLGHSLGCKLQILSCLAVPSLGSRRRGNIFLAYSNAGLDRALPLLRLLTQAWPQQQLADLWRMWMGSSSPP
VNLWLEFEPSPTETNRLIEEQYPVRNNLLVEFRQDDIDDIPLLYQQLCRKYQGHTEWQHLEGDHLTPLGFSYPFQVGEEF
SPIDAFGQLIYQNLLAPNHQMIRSIRAWLATQLAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31246; Mature: 31115

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTWQTDGHTWFLLPPQPRAVVHFLGGAFVGAAPQVFYSRLLEELARMGMAVVATPYTT
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCC
DIDHAQLALNAAQSLHRSLQSKGLLELPLFGLGHSLGCKLQILSCLAVPSLGSRRRGNIF
CCCHHHHHHHHHHHHHHHHHHCCCEECCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
LAYSNAGLDRALPLLRLLTQAWPQQQLADLWRMWMGSSSPPVNLWLEFEPSPTETNRLIE
EEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH
EQYPVRNNLLVEFRQDDIDDIPLLYQQLCRKYQGHTEWQHLEGDHLTPLGFSYPFQVGEE
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHCCCC
FSPIDAFGQLIYQNLLAPNHQMIRSIRAWLATQLAH
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APTWQTDGHTWFLLPPQPRAVVHFLGGAFVGAAPQVFYSRLLEELARMGMAVVATPYTT
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCC
DIDHAQLALNAAQSLHRSLQSKGLLELPLFGLGHSLGCKLQILSCLAVPSLGSRRRGNIF
CCCHHHHHHHHHHHHHHHHHHCCCEECCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
LAYSNAGLDRALPLLRLLTQAWPQQQLADLWRMWMGSSSPPVNLWLEFEPSPTETNRLIE
EEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH
EQYPVRNNLLVEFRQDDIDDIPLLYQQLCRKYQGHTEWQHLEGDHLTPLGFSYPFQVGEE
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHCCCC
FSPIDAFGQLIYQNLLAPNHQMIRSIRAWLATQLAH
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA