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The map label for this gene is petE

Identifier: 86609261

GI number: 86609261

Start: 1889260

End: 1889670

Strand: Direct

Name: petE

Synonym: CYB_1803

Alternate gene names: 86609261

Gene position: 1889260-1889670 (Clockwise)

Preceding gene: 86609248

Following gene: 86609262

Centisome position: 62.01

GC content: 54.74

Gene sequence:

>411_bases
ATGTCTCTAGTTTTTAACCTGGTGAAGCGTTTGCAGCTCATCCTGCTCAGCCTTGTGGTTGGGGGATTGGCTGTGGCGTT
CTTGTCCAACCCTGCTGCTGCCGAGACCTACATTGTCAAAATGGGATCTGACAAGGCCCAGTTGGTCTACGATCCGCCTT
CTCTCACCATCAATCAAGGGGATACCGTCCAATGGGTGAACAACAAGGTCTATCCCCACAACGTCGTCTTTGACAAGGTG
CCCGGTGGAGATGCGGCTTTGGCGGCCAAACTCTCCCACAAGGCGCTGCTTACAGCTCCCAAGCAGGTTGTGGAGTCAGC
TTTTGTCGATGTTCCTCCAGGTGAGTACACCTACTACTGCACGCCCCACCGTGGGGCCGGAATGGTCGGCAAGATCATCG
TGAACGGCTAA

Upstream 100 bases:

>100_bases
CTGCTGTCCCTCCGCCTGGCTGGGTTCTCTTCACTGCATACAAGGGAACAACCGAGCCGCAAAGTCCGGGATAGCTGCTG
TTGCGTTTTGAGAGGAATCC

Downstream 100 bases:

>100_bases
ATCCACACCCCAAGTGCTGAACTTCTAGGGATCCCACTTTTGGTTTTGCCTTGCTGGACAGGGATCCCTGCCTTTAGCAT
AAAAGTTAGCCCTCTCAGGA

Product: plastocyanin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLVFNLVKRLQLILLSLVVGGLAVAFLSNPAAAETYIVKMGSDKAQLVYDPPSLTINQGDTVQWVNNKVYPHNVVFDKV
PGGDAALAAKLSHKALLTAPKQVVESAFVDVPPGEYTYYCTPHRGAGMVGKIIVNG

Sequences:

>Translated_136_residues
MSLVFNLVKRLQLILLSLVVGGLAVAFLSNPAAAETYIVKMGSDKAQLVYDPPSLTINQGDTVQWVNNKVYPHNVVFDKV
PGGDAALAAKLSHKALLTAPKQVVESAFVDVPPGEYTYYCTPHRGAGMVGKIIVNG
>Mature_135_residues
SLVFNLVKRLQLILLSLVVGGLAVAFLSNPAAAETYIVKMGSDKAQLVYDPPSLTINQGDTVQWVNNKVYPHNVVFDKVP
GGDAALAAKLSHKALLTAPKQVVESAFVDVPPGEYTYYCTPHRGAGMVGKIIVNG

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLAS_SYNJB (Q2JHE1)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_478023.1
- HSSP:   P0C178
- ProteinModelPortal:   Q2JHE1
- SMR:   Q2JHE1
- STRING:   Q2JHE1
- GeneID:   3901151
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1803
- TIGR:   CYB_1803
- eggNOG:   COG3794
- HOGENOM:   HBG653810
- OMA:   CEPHRGA
- ProtClustDB:   PRK02710
- BioCyc:   SSP321332:CYB_1803-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00566
- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387
- Gene3D:   G3DSA:2.60.40.420
- PRINTS:   PR00156
- PRINTS:   PR00157
- TIGRFAMs:   TIGR02656

Pfam domain/function: PF00127 Copper-bind; SSF49503 Cupredoxin

EC number: NA

Molecular weight: Translated: 14523; Mature: 14392

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVFNLVKRLQLILLSLVVGGLAVAFLSNPAAAETYIVKMGSDKAQLVYDPPSLTINQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCEEECCC
DTVQWVNNKVYPHNVVFDKVPGGDAALAAKLSHKALLTAPKQVVESAFVDVPPGEYTYYC
CEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCEEEEE
TPHRGAGMVGKIIVNG
CCCCCCCCEEEEEECC
>Mature Secondary Structure 
SLVFNLVKRLQLILLSLVVGGLAVAFLSNPAAAETYIVKMGSDKAQLVYDPPSLTINQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCEEECCC
DTVQWVNNKVYPHNVVFDKVPGGDAALAAKLSHKALLTAPKQVVESAFVDVPPGEYTYYC
CEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCEEEEE
TPHRGAGMVGKIIVNG
CCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA